RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 PRDX5P30044 214 aa11.96□□□□□ -0.49
CHD3-208ENST00000470531 RABL6Q3YEC7 729 aaPredicted RBP11.96□□□□□ -0.49
CHD3-208ENST00000470531 DNAAF5Q86Y56 855 aa11.96□□□□□ -0.49
CHD3-208ENST00000470531 OR8K1Q8NGG5 319 aa11.96□□□□□ -0.49
CHD3-208ENST00000470531 HSD3B7Q9H2F3 369 aa11.96□□□□□ -0.49
CHD3-208ENST00000470531 GOLGA6AQ9NYA3 693 aa11.96□□□□□ -0.49
CHD3-208ENST00000470531 RRP15Q9Y3B9 282 aaKnown RBP11.96□□□□□ -0.49
CHD3-208ENST00000470531 NCK2O43639 380 aa11.96□□□□□ -0.5
CHD3-208ENST00000470531 RPN1P04843 607 aaKnown RBP11.96□□□□□ -0.5
CHD3-208ENST00000470531 CEP57Q86XR8 500 aa11.96□□□□□ -0.5
CHD3-208ENST00000470531 PACSIN2Q9UNF0 486 aaPredicted RBP11.96□□□□□ -0.5
CHD3-208ENST00000470531 ADGRG1Q9Y653 693 aa11.96□□□□□ -0.5
CHD3-208ENST00000470531 ADGRL3Q9HAR2 1447 aa11.95□□□□□ -0.5
CHD3-208ENST00000470531 HEG1Q9ULI3 1381 aa11.95□□□□□ -0.5
CHD3-208ENST00000470531 RNF40O75150 1001 aa11.95□□□□□ -0.5
CHD3-208ENST00000470531 PARP1P09874 1014 aaKnown RBP11.95□□□□□ -0.5
CHD3-208ENST00000470531 IFNAR1P17181 557 aa11.95□□□□□ -0.5
CHD3-208ENST00000470531 PTPREP23469 700 aa11.95□□□□□ -0.5
CHD3-208ENST00000470531 ZNF76P36508 570 aa11.95□□□□□ -0.5
CHD3-208ENST00000470531 IFFO1Q0D2I5 559 aa11.95□□□□□ -0.5
CHD3-208ENST00000470531 RASGRP2Q7LDG7 609 aa11.95□□□□□ -0.5
CHD3-208ENST00000470531 TMTC1Q8IUR5 882 aa11.95□□□□□ -0.5
CHD3-208ENST00000470531 IGDCC4Q8TDY8 1250 aa11.95□□□□□ -0.5
CHD3-208ENST00000470531 RABGGTAQ92696 567 aa11.95□□□□□ -0.5
CHD3-208ENST00000470531 PNKPQ96T60 521 aa11.95□□□□□ -0.5
CHD3-208ENST00000470531 GOLGA6BA6NDN3 693 aa11.95□□□□□ -0.5
CHD3-208ENST00000470531 SSR1P43307 286 aaKnown RBP11.95□□□□□ -0.5
CHD3-208ENST00000470531 MKRN4PQ13434 485 aaPredicted RBP11.95□□□□□ -0.5
CHD3-208ENST00000470531 RDH13Q8NBN7 331 aa11.95□□□□□ -0.5
CHD3-208ENST00000470531 FUT8Q9BYC5 575 aa11.95□□□□□ -0.5
CHD3-208ENST00000470531 ALDH8A1Q9H2A2 487 aaPredicted RBP11.95□□□□□ -0.5
CHD3-208ENST00000470531 LRWD1Q9UFC0 647 aa11.95□□□□□ -0.5
CHD3-208ENST00000470531 GOLGB1Q14789 3259 aaKnown RBP11.95□□□□□ -0.5
CHD3-208ENST00000470531 NDUFAB1O14561 156 aa11.95□□□□□ -0.5
CHD3-208ENST00000470531 TACC1O75410 805 aa11.95□□□□□ -0.5
CHD3-208ENST00000470531 PRCPP42785 496 aa11.95□□□□□ -0.5
CHD3-208ENST00000470531 RASSF7Q02833 373 aa11.95□□□□□ -0.5
CHD3-208ENST00000470531 IFIH1Q9BYX4 1025 aaKnown RBP11.95□□□□□ -0.5
CHD3-208ENST00000470531 EFCC1Q9HA90 598 aa11.95□□□□□ -0.5
CHD3-208ENST00000470531 PPANQ9NQ55 473 aaKnown RBP11.95□□□□□ -0.5
CHD3-208ENST00000470531 INTS13Q9NVM9 706 aa11.95□□□□□ -0.5
CHD3-208ENST00000470531 GEMIN8Q9NWZ8 242 aaKnown RBP11.95□□□□□ -0.5
CHD3-208ENST00000470531 BCS1LQ9Y276 419 aa11.95□□□□□ -0.5
CHD3-208ENST00000470531 TTC26A0AVF1 554 aa11.94□□□□□ -0.5
CHD3-208ENST00000470531 MOCS3O95396 460 aa11.94□□□□□ -0.5
CHD3-208ENST00000470531 MAGEA1P43355 309 aa11.94□□□□□ -0.5
CHD3-208ENST00000470531 TOB1P50616 345 aaPredicted RBP11.94□□□□□ -0.5
CHD3-208ENST00000470531 USP17L2Q6R6M4 530 aa11.94□□□□□ -0.5
CHD3-208ENST00000470531 LRRC47Q8N1G4 583 aaKnown RBP11.94□□□□□ -0.5
CHD3-208ENST00000470531 ENAHQ8N8S7 591 aaPredicted RBP11.94□□□□□ -0.5
CHD3-208ENST00000470531 PNMA1Q8ND90 353 aa11.94□□□□□ -0.5
CHD3-208ENST00000470531 FAM76AQ8TAV0 307 aa11.94□□□□□ -0.5
CHD3-208ENST00000470531 ENOX1Q8TC92 643 aaKnown RBP11.94□□□□□ -0.5
CHD3-208ENST00000470531 BCAS4Q8TDM0 211 aa11.94□□□□□ -0.5
CHD3-208ENST00000470531 PIK3R5Q8WYR1 880 aa11.94□□□□□ -0.5
CHD3-208ENST00000470531 FBXO3Q9UK99 471 aa11.94□□□□□ -0.5
CHD3-208ENST00000470531 TTF2Q9UNY4 1162 aaKnown RBP11.94□□□□□ -0.5
CHD3-208ENST00000470531 RDXP35241 583 aaKnown RBP11.94□□□□□ -0.5
CHD3-208ENST00000470531 SPAG1Q07617 926 aa11.94□□□□□ -0.5
CHD3-208ENST00000470531 UBE3CQ15386 1083 aa11.94□□□□□ -0.5
CHD3-208ENST00000470531 TTC31Q49AM3 519 aaPredicted RBP11.94□□□□□ -0.5
CHD3-208ENST00000470531 CCDC43Q96MW1 224 aaKnown RBP11.94□□□□□ -0.5
CHD3-208ENST00000470531 ALS2CR12Q96Q35 445 aa11.94□□□□□ -0.5
CHD3-208ENST00000470531 TEX13AQ9BXU3 409 aaPredicted RBP11.94□□□□□ -0.5
CHD3-208ENST00000470531 CEP83Q9Y592 693 aa11.94□□□□□ -0.5
CHD3-208ENST00000470531 MAP3K15Q6ZN16 1313 aa11.94□□□□□ -0.5
CHD3-208ENST00000470531 FTCDO95954 541 aa11.94□□□□□ -0.5
CHD3-208ENST00000470531 DDB1Q16531 1140 aa11.94□□□□□ -0.5
CHD3-208ENST00000470531 CLEC10AQ8IUN9 316 aa11.94□□□□□ -0.5
CHD3-208ENST00000470531 TUBGCP2Q9BSJ2 902 aa11.94□□□□□ -0.5
CHD3-208ENST00000470531 MLXIPQ9HAP2 919 aa11.94□□□□□ -0.5
CHD3-208ENST00000470531 AGPAT5Q9NUQ2 364 aa11.94□□□□□ -0.5
CHD3-208ENST00000470531 EBAG9O00559 213 aa11.93□□□□□ -0.5
CHD3-208ENST00000470531 HSF2BPO75031 334 aa11.93□□□□□ -0.5
CHD3-208ENST00000470531 MFAP3LO75121 409 aa11.93□□□□□ -0.5
CHD3-208ENST00000470531 ATP1A1P05023 1023 aaKnown RBP11.93□□□□□ -0.5
CHD3-208ENST00000470531 CALM1P0DP23 149 aa11.93□□□□□ -0.5
CHD3-208ENST00000470531 CALM2P0DP24 149 aa11.93□□□□□ -0.5
CHD3-208ENST00000470531 CALM3P0DP25 149 aa11.93□□□□□ -0.5
CHD3-208ENST00000470531 STAG2Q8N3U4 1231 aa11.93□□□□□ -0.5
CHD3-208ENST00000470531 NLRP3Q96P20 1036 aa11.93□□□□□ -0.5
CHD3-208ENST00000470531 RMND1Q9NWS8 449 aa11.93□□□□□ -0.5
CHD3-208ENST00000470531 FBXO2Q9UK22 296 aaPredicted RBP11.93□□□□□ -0.5
CHD3-208ENST00000470531 MRFAP1Q9Y605 127 aa11.93□□□□□ -0.5
CHD3-208ENST00000470531 CHMP2AO43633 222 aa11.93□□□□□ -0.5
CHD3-208ENST00000470531 KRT83P78385 493 aa11.93□□□□□ -0.5
CHD3-208ENST00000470531 TCP10Q12799 353 aa11.93□□□□□ -0.5
CHD3-208ENST00000470531 PPP2R5AQ15172 486 aa11.93□□□□□ -0.5
CHD3-208ENST00000470531 CCDC25Q86WR0 208 aa11.93□□□□□ -0.5
CHD3-208ENST00000470531 SRPRBQ9Y5M8 271 aaKnown RBP11.93□□□□□ -0.5
CHD3-208ENST00000470531 BUB1BO60566 1050 aaPredicted RBP11.93□□□□□ -0.5
CHD3-208ENST00000470531 SCG2P13521 617 aa11.93□□□□□ -0.5
CHD3-208ENST00000470531 PDE6BP35913 854 aa11.93□□□□□ -0.5
CHD3-208ENST00000470531 GNGT1P63211 74 aa11.93□□□□□ -0.5
CHD3-208ENST00000470531 C8orf74Q6P047 294 aa11.93□□□□□ -0.5
CHD3-208ENST00000470531 CABP7Q86V35 215 aa11.93□□□□□ -0.5
CHD3-208ENST00000470531 TMX4Q9H1E5 349 aaPredicted RBP11.93□□□□□ -0.5
CHD3-208ENST00000470531 TMEM94Q12767 1356 aa11.92□□□□□ -0.5
CHD3-208ENST00000470531 WNT7AO00755 349 aa11.92□□□□□ -0.5
CHD3-208ENST00000470531 NDUFA10O95299 355 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms