RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 ANKLE1Q8NAG6 615 aa16.66■□□□□ 0.26
COMMD3-208ENST00000470045 PRPF38AQ8NAV1 312 aaKnown RBP16.66■□□□□ 0.26
COMMD3-208ENST00000470045 GMCL1Q96IK5 515 aa16.66■□□□□ 0.26
COMMD3-208ENST00000470045 FEM1BQ9UK73 627 aa16.66■□□□□ 0.26
COMMD3-208ENST00000470045 OGDHLQ9ULD0 1010 aa16.66■□□□□ 0.26
COMMD3-208ENST00000470045 NMT2O60551 498 aa16.65■□□□□ 0.26
COMMD3-208ENST00000470045 COBLO75128 1261 aa16.65■□□□□ 0.26
COMMD3-208ENST00000470045 TFRCP02786 760 aaKnown RBP16.65■□□□□ 0.26
COMMD3-208ENST00000470045 STAT3P40763 770 aa16.65■□□□□ 0.26
COMMD3-208ENST00000470045 MFSD14CQ5VZR4 134 aa16.65■□□□□ 0.26
COMMD3-208ENST00000470045 SLFN13Q68D06 897 aa16.65■□□□□ 0.26
COMMD3-208ENST00000470045 TBC1D10CQ8IV04 446 aa16.65■□□□□ 0.26
COMMD3-208ENST00000470045 STAG1Q8WVM7 1258 aa16.65■□□□□ 0.26
COMMD3-208ENST00000470045 TEX13BQ9BXU2 312 aa16.65■□□□□ 0.26
COMMD3-208ENST00000470045 RANBP6O60518 1105 aaKnown RBP16.64■□□□□ 0.25
COMMD3-208ENST00000470045 FCER1AP12319 257 aa16.64■□□□□ 0.25
COMMD3-208ENST00000470045 BMP3P12645 472 aa16.64■□□□□ 0.25
COMMD3-208ENST00000470045 CCND3P30281 292 aaPredicted RBP16.64■□□□□ 0.25
COMMD3-208ENST00000470045 MNX1P50219 401 aaPredicted RBP16.64■□□□□ 0.25
COMMD3-208ENST00000470045 AKNAD1Q5T1N1 836 aa16.64■□□□□ 0.25
COMMD3-208ENST00000470045 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.64■□□□□ 0.25
COMMD3-208ENST00000470045 DPP9Q86TI2 863 aa16.64■□□□□ 0.25
COMMD3-208ENST00000470045 DSCC1Q9BVC3 393 aa16.64■□□□□ 0.25
COMMD3-208ENST00000470045 SLC38A10Q9HBR0 1119 aa16.64■□□□□ 0.25
COMMD3-208ENST00000470045 TCP11L1Q9NUJ3 509 aa16.64■□□□□ 0.25
COMMD3-208ENST00000470045 STX8Q9UNK0 236 aa16.64■□□□□ 0.25
COMMD3-208ENST00000470045 PLA2G6O60733 806 aa16.63■□□□□ 0.25
COMMD3-208ENST00000470045 CYBAP13498 195 aa16.63■□□□□ 0.25
COMMD3-208ENST00000470045 HAND2P61296 217 aa16.63■□□□□ 0.25
COMMD3-208ENST00000470045 LHX8Q68G74 356 aa16.63■□□□□ 0.25
COMMD3-208ENST00000470045 HTATIP2Q9BUP3 242 aa16.63■□□□□ 0.25
COMMD3-208ENST00000470045 IL25Q9H293 177 aa16.63■□□□□ 0.25
COMMD3-208ENST00000470045 CEP290O15078 2479 aa16.62■□□□□ 0.25
COMMD3-208ENST00000470045 FDX1P10109 184 aa16.62■□□□□ 0.25
COMMD3-208ENST00000470045 CYP2C19P33261 490 aa16.62■□□□□ 0.25
COMMD3-208ENST00000470045 NT5C2P49902 561 aa16.62■□□□□ 0.25
COMMD3-208ENST00000470045 STAT2P52630 851 aa16.62■□□□□ 0.25
COMMD3-208ENST00000470045 OAZ1P54368 228 aa16.62■□□□□ 0.25
COMMD3-208ENST00000470045 SNRNP48Q6IEG0 339 aaKnown RBP16.62■□□□□ 0.25
COMMD3-208ENST00000470045 DIS3LQ8TF46 1054 aaKnown RBP16.62■□□□□ 0.25
COMMD3-208ENST00000470045 KIFC2Q96AC6 838 aa16.62■□□□□ 0.25
COMMD3-208ENST00000470045 MAML3Q96JK9 1138 aa16.62■□□□□ 0.25
COMMD3-208ENST00000470045 MMP19Q99542 508 aa16.62■□□□□ 0.25
COMMD3-208ENST00000470045 RNF41Q9H4P4 317 aaPredicted RBP16.62■□□□□ 0.25
COMMD3-208ENST00000470045 SLC5A4Q9NY91 659 aa16.62■□□□□ 0.25
COMMD3-208ENST00000470045 RAD50Q92878 1312 aa16.62■□□□□ 0.25
COMMD3-208ENST00000470045 TMEM232C9JQI7 657 aa16.61■□□□□ 0.25
COMMD3-208ENST00000470045 ZBED4O75132 1171 aa16.61■□□□□ 0.25
COMMD3-208ENST00000470045 SLC1A4P43007 532 aa16.61■□□□□ 0.25
COMMD3-208ENST00000470045 KCTD2Q14681 263 aa16.61■□□□□ 0.25
COMMD3-208ENST00000470045 RRP12Q5JTH9 1297 aaKnown RBP16.61■□□□□ 0.25
COMMD3-208ENST00000470045 MFSD6Q6ZSS7 791 aa16.61■□□□□ 0.25
COMMD3-208ENST00000470045 RASGRP2Q7LDG7 609 aa16.61■□□□□ 0.25
COMMD3-208ENST00000470045 NECAB2Q7Z6G3 386 aa16.61■□□□□ 0.25
COMMD3-208ENST00000470045 FAM160B2Q86V87 743 aa16.61■□□□□ 0.25
COMMD3-208ENST00000470045 TRPV1Q8NER1 839 aa16.61■□□□□ 0.25
COMMD3-208ENST00000470045 PAWRQ96IZ0 340 aaKnown RBP16.61■□□□□ 0.25
COMMD3-208ENST00000470045 TOMM22Q9NS69 142 aa16.61■□□□□ 0.25
COMMD3-208ENST00000470045 DIS3Q9Y2L1 958 aaKnown RBP16.61■□□□□ 0.25
COMMD3-208ENST00000470045 RIPK3Q9Y572 518 aa16.61■□□□□ 0.25
COMMD3-208ENST00000470045 NEDD4P46934 1319 aa16.61■□□□□ 0.25
COMMD3-208ENST00000470045 ZNF213O14771 459 aa16.6■□□□□ 0.25
COMMD3-208ENST00000470045 MSCO60682 206 aa16.6■□□□□ 0.25
COMMD3-208ENST00000470045 TOP1P11387 765 aaKnown RBP16.6■□□□□ 0.25
COMMD3-208ENST00000470045 MCCP23508 829 aa16.6■□□□□ 0.25
COMMD3-208ENST00000470045 ZNF792Q3KQV3 632 aa16.6■□□□□ 0.25
COMMD3-208ENST00000470045 RCSD1Q6JBY9 416 aa16.6■□□□□ 0.25
COMMD3-208ENST00000470045 CHURC1Q8WUH1 139 aa16.6■□□□□ 0.25
COMMD3-208ENST00000470045 DCAF4Q8WV16 495 aa16.6■□□□□ 0.25
COMMD3-208ENST00000470045 DDX20Q9UHI6 824 aaKnown RBP16.6■□□□□ 0.25
COMMD3-208ENST00000470045 DNAJC25-GNG10A0A024R161 153 aa16.59■□□□□ 0.25
COMMD3-208ENST00000470045 CPXCR1Q8N123 301 aa16.59■□□□□ 0.25
COMMD3-208ENST00000470045 ESR2Q92731 530 aa16.59■□□□□ 0.25
COMMD3-208ENST00000470045 TTC14Q96N46 770 aa16.59■□□□□ 0.25
COMMD3-208ENST00000470045 TMEM47Q9BQJ4 181 aa16.59■□□□□ 0.25
COMMD3-208ENST00000470045 RAVER2Q9HCJ3 691 aaKnown RBP16.59■□□□□ 0.25
COMMD3-208ENST00000470045 ZNF536O15090 1300 aa16.59■□□□□ 0.25
COMMD3-208ENST00000470045 H0YGN5 161 aa16.58■□□□□ 0.24
COMMD3-208ENST00000470045 PGK2P07205 417 aa16.58■□□□□ 0.24
COMMD3-208ENST00000470045 COL6A1P12109 1028 aa16.58■□□□□ 0.24
COMMD3-208ENST00000470045 CHMLP26374 656 aa16.58■□□□□ 0.24
COMMD3-208ENST00000470045 KCTD1Q719H9 257 aa16.58■□□□□ 0.24
COMMD3-208ENST00000470045 CHST13Q8NET6 341 aa16.58■□□□□ 0.24
COMMD3-208ENST00000470045 FBXO40Q9UH90 709 aa16.58■□□□□ 0.24
COMMD3-208ENST00000470045 NRBP1Q9UHY1 535 aa16.58■□□□□ 0.24
COMMD3-208ENST00000470045 CTNNA3Q9UI47 895 aa16.58■□□□□ 0.24
COMMD3-208ENST00000470045 PFASO15067 1338 aa16.58■□□□□ 0.24
COMMD3-208ENST00000470045 LCTP09848 1927 aa16.58■□□□□ 0.24
COMMD3-208ENST00000470045 SMCHD1A6NHR9 2005 aa16.57■□□□□ 0.24
COMMD3-208ENST00000470045 MCM3APO60318 1980 aa16.57■□□□□ 0.24
COMMD3-208ENST00000470045 SEPT4O43236 478 aa16.57■□□□□ 0.24
COMMD3-208ENST00000470045 SNHG28P0DPA3 235 aa16.57■□□□□ 0.24
COMMD3-208ENST00000470045 IMMTQ16891 758 aaKnown RBP16.57■□□□□ 0.24
COMMD3-208ENST00000470045 BTNL9Q6UXG8 535 aa16.57■□□□□ 0.24
COMMD3-208ENST00000470045 DPF3Q92784 378 aa16.57■□□□□ 0.24
COMMD3-208ENST00000470045 C11orf49Q9H6J7 331 aa16.57■□□□□ 0.24
COMMD3-208ENST00000470045 PRR12Q9ULL5 1215 aa16.57■□□□□ 0.24
COMMD3-208ENST00000470045 CTDP1Q9Y5B0 961 aaPredicted RBP16.57■□□□□ 0.24
COMMD3-208ENST00000470045 LRRC37A2A6NM11 1700 aa16.56■□□□□ 0.24
COMMD3-208ENST00000470045 PDHBP11177 359 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms