RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 ROBO3Q96MS0 1386 aa10.97□□□□□ -0.65
SHROOM3-203ENST00000469923 ALPK3Q96L96 1907 aa10.96□□□□□ -0.65
SHROOM3-203ENST00000469923 ZNF536O15090 1300 aa10.96□□□□□ -0.65
SHROOM3-203ENST00000469923 ADCY6O43306 1168 aa10.96□□□□□ -0.65
SHROOM3-203ENST00000469923 SNAI1O95863 264 aaPredicted RBP10.96□□□□□ -0.65
SHROOM3-203ENST00000469923 MYCNP04198 464 aaPredicted RBP10.96□□□□□ -0.65
SHROOM3-203ENST00000469923 FGRP09769 529 aa10.96□□□□□ -0.65
SHROOM3-203ENST00000469923 TSPY3P0CV98 308 aa10.96□□□□□ -0.65
SHROOM3-203ENST00000469923 TSPY8P0CW00 308 aa10.96□□□□□ -0.65
SHROOM3-203ENST00000469923 COL6A1P12109 1028 aa10.96□□□□□ -0.65
SHROOM3-203ENST00000469923 CYBAP13498 195 aa10.96□□□□□ -0.65
SHROOM3-203ENST00000469923 FXR1P51114 621 aaKnown RBP eCLIP10.96□□□□□ -0.65
SHROOM3-203ENST00000469923 CCNA1P78396 465 aa10.96□□□□□ -0.65
SHROOM3-203ENST00000469923 RIOX2Q8IUF8 465 aa10.96□□□□□ -0.65
SHROOM3-203ENST00000469923 AMOTL1Q8IY63 956 aa10.96□□□□□ -0.65
SHROOM3-203ENST00000469923 SOCS4Q8WXH5 440 aa10.96□□□□□ -0.65
SHROOM3-203ENST00000469923 FERMT2Q96AC1 680 aa10.96□□□□□ -0.65
SHROOM3-203ENST00000469923 MMP19Q99542 508 aa10.96□□□□□ -0.65
SHROOM3-203ENST00000469923 SLF1Q9BQI6 1058 aa10.96□□□□□ -0.65
SHROOM3-203ENST00000469923 GPCPD1Q9NPB8 672 aa10.96□□□□□ -0.65
SHROOM3-203ENST00000469923 HOMER2Q9NSB8 354 aa10.96□□□□□ -0.65
SHROOM3-203ENST00000469923 ANAPC4Q9UJX5 808 aa10.96□□□□□ -0.65
SHROOM3-203ENST00000469923 GREB1LQ9C091 1923 aaPredicted RBP10.96□□□□□ -0.66
SHROOM3-203ENST00000469923 ZNFX1Q9P2E3 1918 aaKnown RBP10.96□□□□□ -0.66
SHROOM3-203ENST00000469923 A0A0C4DFX4 3053 aa10.95□□□□□ -0.66
SHROOM3-203ENST00000469923 ASTN1O14525 1302 aa10.95□□□□□ -0.66
SHROOM3-203ENST00000469923 NEDD4P46934 1319 aa10.95□□□□□ -0.66
SHROOM3-203ENST00000469923 FRMPD2Q68DX3 1309 aaPredicted RBP10.95□□□□□ -0.66
SHROOM3-203ENST00000469923 TTLL1O95922 423 aa10.95□□□□□ -0.66
SHROOM3-203ENST00000469923 ZNF865P0CJ78 1059 aaPredicted RBP10.95□□□□□ -0.66
SHROOM3-203ENST00000469923 BMP3P12645 472 aa10.95□□□□□ -0.66
SHROOM3-203ENST00000469923 PTH1RQ03431 593 aa10.95□□□□□ -0.66
SHROOM3-203ENST00000469923 MUM1L1Q5H9M0 696 aa10.95□□□□□ -0.66
SHROOM3-203ENST00000469923 SNRNP48Q6IEG0 339 aaKnown RBP10.95□□□□□ -0.66
SHROOM3-203ENST00000469923 CCDC174Q6PII3 467 aa10.95□□□□□ -0.66
SHROOM3-203ENST00000469923 NECAB2Q7Z6G3 386 aa10.95□□□□□ -0.66
SHROOM3-203ENST00000469923 GTF3C2Q8WUA4 911 aaPredicted RBP10.95□□□□□ -0.66
SHROOM3-203ENST00000469923 TMEM47Q9BQJ4 181 aa10.95□□□□□ -0.66
SHROOM3-203ENST00000469923 NACAP1Q9BZK3 213 aa10.95□□□□□ -0.66
SHROOM3-203ENST00000469923 SENP6Q9GZR1 1112 aaPredicted RBP10.95□□□□□ -0.66
SHROOM3-203ENST00000469923 OSBPL3Q9H4L5 887 aa10.95□□□□□ -0.66
SHROOM3-203ENST00000469923 C11orf49Q9H6J7 331 aa10.95□□□□□ -0.66
SHROOM3-203ENST00000469923 SLC38A10Q9HBR0 1119 aa10.95□□□□□ -0.66
SHROOM3-203ENST00000469923 SENP2Q9HC62 589 aa10.95□□□□□ -0.66
SHROOM3-203ENST00000469923 GOPCQ9HD26 462 aa10.95□□□□□ -0.66
SHROOM3-203ENST00000469923 COL11A1P12107 1806 aaPredicted RBP10.95□□□□□ -0.66
SHROOM3-203ENST00000469923 MYADML2A6NDP7 307 aa10.94□□□□□ -0.66
SHROOM3-203ENST00000469923 SOWAHBA6NEL2 793 aa10.94□□□□□ -0.66
SHROOM3-203ENST00000469923 EVI5O60447 810 aa10.94□□□□□ -0.66
SHROOM3-203ENST00000469923 GOLGA8HP0CJ92 632 aa10.94□□□□□ -0.66
SHROOM3-203ENST00000469923 FCER1AP12319 257 aa10.94□□□□□ -0.66
SHROOM3-203ENST00000469923 NOVP48745 357 aa10.94□□□□□ -0.66
SHROOM3-203ENST00000469923 MFSD14CQ5VZR4 134 aa10.94□□□□□ -0.66
SHROOM3-203ENST00000469923 SHCBP1Q8NEM2 672 aa10.94□□□□□ -0.66
SHROOM3-203ENST00000469923 TBC1D5Q92609 795 aa10.94□□□□□ -0.66
SHROOM3-203ENST00000469923 UBA5Q9GZZ9 404 aa10.94□□□□□ -0.66
SHROOM3-203ENST00000469923 MROH8Q9H579 483 aa10.94□□□□□ -0.66
SHROOM3-203ENST00000469923 TOMM22Q9NS69 142 aa10.94□□□□□ -0.66
SHROOM3-203ENST00000469923 ZBTB47Q9UFB7 747 aaPredicted RBP10.94□□□□□ -0.66
SHROOM3-203ENST00000469923 DDX20Q9UHI6 824 aaKnown RBP10.94□□□□□ -0.66
SHROOM3-203ENST00000469923 ISY1Q9ULR0 285 aaKnown RBP10.94□□□□□ -0.66
SHROOM3-203ENST00000469923 STX8Q9UNK0 236 aa10.94□□□□□ -0.66
SHROOM3-203ENST00000469923 IVNS1ABPQ9Y6Y0 642 aa10.94□□□□□ -0.66
SHROOM3-203ENST00000469923 CCDC171Q6TFL3 1326 aa10.93□□□□□ -0.66
SHROOM3-203ENST00000469923 DNAJC25-GNG10A0A024R161 153 aa10.93□□□□□ -0.66
SHROOM3-203ENST00000469923 TSPY2A6NKD2 308 aa10.93□□□□□ -0.66
SHROOM3-203ENST00000469923 STRNO43815 780 aa10.93□□□□□ -0.66
SHROOM3-203ENST00000469923 ORC4O43929 436 aa10.93□□□□□ -0.66
SHROOM3-203ENST00000469923 PGK1P00558 417 aa10.93□□□□□ -0.66
SHROOM3-203ENST00000469923 ADCYAP1R1P41586 468 aa10.93□□□□□ -0.66
SHROOM3-203ENST00000469923 PDE4BQ07343 736 aa10.93□□□□□ -0.66
SHROOM3-203ENST00000469923 OLFML2BQ68BL8 750 aa10.93□□□□□ -0.66
SHROOM3-203ENST00000469923 SH3RF1Q7Z6J0 888 aa10.93□□□□□ -0.66
SHROOM3-203ENST00000469923 MB21D1Q8N884 522 aa10.93□□□□□ -0.66
SHROOM3-203ENST00000469923 PRPF38AQ8NAV1 312 aaKnown RBP10.93□□□□□ -0.66
SHROOM3-203ENST00000469923 GMCL1P1Q8NEA9 526 aa10.93□□□□□ -0.66
SHROOM3-203ENST00000469923 PPP1R13LQ8WUF5 828 aa10.93□□□□□ -0.66
SHROOM3-203ENST00000469923 LRCH3Q96II8 777 aa10.93□□□□□ -0.66
SHROOM3-203ENST00000469923 PRR12Q9ULL5 1215 aa10.93□□□□□ -0.66
SHROOM3-203ENST00000469923 PARP14Q460N5 1801 aa10.93□□□□□ -0.66
SHROOM3-203ENST00000469923 MYH8P13535 1937 aa10.92□□□□□ -0.66
SHROOM3-203ENST00000469923 ZBED4O75132 1171 aa10.92□□□□□ -0.66
SHROOM3-203ENST00000469923 SLC35G1Q2M3R5 365 aa10.92□□□□□ -0.66
SHROOM3-203ENST00000469923 STAG1Q8WVM7 1258 aa10.92□□□□□ -0.66
SHROOM3-203ENST00000469923 TINF2Q9BSI4 451 aa10.92□□□□□ -0.66
SHROOM3-203ENST00000469923 SH2D4AQ9H788 454 aa10.92□□□□□ -0.66
SHROOM3-203ENST00000469923 GPHNQ9NQX3 736 aaPredicted RBP10.92□□□□□ -0.66
SHROOM3-203ENST00000469923 PDGFCQ9NRA1 345 aa10.92□□□□□ -0.66
SHROOM3-203ENST00000469923 FEM1BQ9UK73 627 aa10.92□□□□□ -0.66
SHROOM3-203ENST00000469923 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.91□□□□□ -0.66
SHROOM3-203ENST00000469923 B4E1Z4 1266 aa10.91□□□□□ -0.66
SHROOM3-203ENST00000469923 SLC25A27O95847 323 aa10.91□□□□□ -0.66
SHROOM3-203ENST00000469923 ALAS1P13196 640 aa10.91□□□□□ -0.66
SHROOM3-203ENST00000469923 ITGB8P26012 769 aa10.91□□□□□ -0.66
SHROOM3-203ENST00000469923 SLC1A4P43007 532 aa10.91□□□□□ -0.66
SHROOM3-203ENST00000469923 MAGEA10P43363 369 aaPredicted RBP10.91□□□□□ -0.66
SHROOM3-203ENST00000469923 MDM2Q00987 491 aaPredicted RBP10.91□□□□□ -0.66
SHROOM3-203ENST00000469923 LRRC41Q15345 812 aa10.91□□□□□ -0.66
SHROOM3-203ENST00000469923 AKNAD1Q5T1N1 836 aa10.91□□□□□ -0.66
SHROOM3-203ENST00000469923 TTC22Q5TAA0 569 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms