RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 POMGNT1Q8WZA1 660 aa7.77□□□□□ -1.16
CD46-212ENST00000469535 TMEM106CQ9BVX2 250 aa7.77□□□□□ -1.16
CD46-212ENST00000469535 C1orf112Q9NSG2 853 aa7.77□□□□□ -1.16
CD46-212ENST00000469535 MOSPD1Q9UJG1 213 aa7.77□□□□□ -1.16
CD46-212ENST00000469535 ZBTB1Q9Y2K1 713 aa7.77□□□□□ -1.16
CD46-212ENST00000469535 POLR3AO14802 1390 aaPredicted RBP7.77□□□□□ -1.17
CD46-212ENST00000469535 XPOTO43592 962 aaKnown RBP7.77□□□□□ -1.17
CD46-212ENST00000469535 HOXB7P09629 217 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 RLBP1P12271 317 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 PTPREP23469 700 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 VAV2P52735 878 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 CC2D2BQ6DHV5 1058 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 CPLX4Q7Z7G2 160 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 IWS1Q96ST2 819 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 LSM14BQ9BX40 385 aaKnown RBP7.77□□□□□ -1.17
CD46-212ENST00000469535 SNX25Q9H3E2 840 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 PAXBP1Q9Y5B6 917 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 TMEM2Q9UHN6 1383 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 PNMA6EA0A0J9YXQ4 647 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 KRT40Q6A162 431 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 DAAM2Q86T65 1068 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 DNAJC5Q9H3Z4 198 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 ZNF215Q9UL58 517 aaPredicted RBP7.77□□□□□ -1.17
CD46-212ENST00000469535 PPME1Q9Y570 386 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 NPHP4O75161 1426 aaPredicted RBP7.77□□□□□ -1.17
CD46-212ENST00000469535 SLC16A2P36021 539 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 KLHL30Q0D2K2 578 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 SLC9C1Q4G0N8 1177 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 KRT26Q7Z3Y9 468 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 NEO1Q92859 1461 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 WDR17Q8IZU2 1322 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 USP17L3A6NCW0 530 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 USP17L4A6NCW7 530 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 WDR46O15213 610 aaKnown RBP7.77□□□□□ -1.17
CD46-212ENST00000469535 KLHL40Q2TBA0 621 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 USP17L1Q7RTZ2 530 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 PSMB7Q99436 277 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 ZNF577Q9BSK1 485 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 ARFGAP3Q9NP61 516 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 PANK4Q9NVE7 773 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 BABAM1Q9NWV8 329 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 PNMA3Q9UL41 463 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 PALD1Q9ULE6 856 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 TTC36A6NLP5 189 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 E7EWF7 191 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 OSTNP61366 133 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 EN1Q05925 392 aaPredicted RBP7.77□□□□□ -1.17
CD46-212ENST00000469535 FAM178BQ8IXR5 827 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 PI4K2BQ8TCG2 481 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 BAG1Q99933 345 aaPredicted RBP7.77□□□□□ -1.17
CD46-212ENST00000469535 NLRC4Q9NPP4 1024 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 LEMD3Q9Y2U8 911 aa7.77□□□□□ -1.17
CD46-212ENST00000469535 BZW2Q9Y6E2 419 aaKnown RBP7.77□□□□□ -1.17
CD46-212ENST00000469535 CUTAO60888 179 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 ABCB4P21439 1286 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 SETDB1Q15047 1291 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 TAOK1Q7L7X3 1001 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 HGSO14964 777 aaPredicted RBP7.76□□□□□ -1.17
CD46-212ENST00000469535 TBC1D8O95759 1140 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 ERCC6LQ2NKX8 1250 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 CCDC105Q8IYK2 499 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 BLIDQ8IZY5 108 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 COA7Q96BR5 231 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 ANKRD36BP1Q96IX9 119 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 FAM49AQ9H0Q0 323 aaPredicted RBP7.76□□□□□ -1.17
CD46-212ENST00000469535 CCDC68Q9H2F9 335 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 UBN1Q9NPG3 1134 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 SEC31BQ9NQW1 1179 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 CEP104O60308 925 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 VIMP08670 466 aaKnown RBP7.76□□□□□ -1.17
CD46-212ENST00000469535 ANXA13P27216 316 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 U2AF1L4Q8WU68 220 aaKnown RBP7.76□□□□□ -1.17
CD46-212ENST00000469535 NUCKS1Q9H1E3 243 aaKnown RBP7.76□□□□□ -1.17
CD46-212ENST00000469535 RAB20Q9NX57 234 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 SNX14Q9Y5W7 946 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 SFMBT2Q5VUG0 894 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 CEP128Q6ZU80 1094 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 MAGED2Q9UNF1 606 aaPredicted RBP7.76□□□□□ -1.17
CD46-212ENST00000469535 NPR1P16066 1061 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 ATP5DP30049 168 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 SNAP25P60880 206 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 NFX1Q12986 1120 aaKnown RBP7.76□□□□□ -1.17
CD46-212ENST00000469535 KRT33BQ14525 404 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 LRCH2Q5VUJ6 765 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 SYT10Q6XYQ8 523 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 KLHL7Q8IXQ5 586 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 SCYL1Q96KG9 808 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 VPS37BQ9H9H4 285 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 PNMA2Q9UL42 364 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 H0YCG3 227 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 FAM160A1Q05DH4 1040 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 INTS8Q75QN2 995 aaKnown RBP7.76□□□□□ -1.17
CD46-212ENST00000469535 FAM207AQ9NSI2 230 aaPredicted RBP7.76□□□□□ -1.17
CD46-212ENST00000469535 SAMD15Q9P1V8 674 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 ANAPC5Q9UJX4 755 aa7.76□□□□□ -1.17
CD46-212ENST00000469535 ACTN4O43707 911 aaKnown RBP7.75□□□□□ -1.17
CD46-212ENST00000469535 CIB2O75838 187 aa7.75□□□□□ -1.17
CD46-212ENST00000469535 PCCAP05165 728 aaPredicted RBP7.75□□□□□ -1.17
CD46-212ENST00000469535 HPDP32754 393 aaPredicted RBP7.75□□□□□ -1.17
CD46-212ENST00000469535 PTPROQ16827 1216 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms