RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-208ENST00000469356 PALM3A6NDB9 673 aaPredicted RBP26.71■■□□□ 1.87
SREBF1-208ENST00000469356 GOLGA8AA7E2F4 631 aa26.71■■□□□ 1.87
SREBF1-208ENST00000469356 GOLGA8BA8MQT2 603 aa26.71■■□□□ 1.87
SREBF1-208ENST00000469356 KLRF2D3W0D1 207 aa26.71■■□□□ 1.87
SREBF1-208ENST00000469356 METAP2P50579 478 aaKnown RBP eCLIP26.71■■□□□ 1.87
SREBF1-208ENST00000469356 CRHR2Q13324 411 aa26.71■■□□□ 1.87
SREBF1-208ENST00000469356 RTN1Q16799 776 aa26.71■■□□□ 1.87
SREBF1-208ENST00000469356 SYDE2Q5VT97 1194 aa26.71■■□□□ 1.87
SREBF1-208ENST00000469356 MAD2L2Q9UI95 211 aa26.71■■□□□ 1.87
SREBF1-208ENST00000469356 PNMA2Q9UL42 364 aa26.71■■□□□ 1.87
SREBF1-208ENST00000469356 RABGAP1Q9Y3P9 1069 aa26.71■■□□□ 1.87
SREBF1-208ENST00000469356 SPDYE16A6NNV3 312 aaPredicted RBP26.7■■□□□ 1.87
SREBF1-208ENST00000469356 DHX16O60231 1041 aaKnown RBP26.7■■□□□ 1.87
SREBF1-208ENST00000469356 GOLGA8HP0CJ92 632 aa26.7■■□□□ 1.87
SREBF1-208ENST00000469356 SMARCA1P28370 1054 aa26.7■■□□□ 1.87
SREBF1-208ENST00000469356 MCM2P49736 904 aa26.7■■□□□ 1.87
SREBF1-208ENST00000469356 MYL10Q9BUA6 226 aa26.7■■□□□ 1.87
SREBF1-208ENST00000469356 FBXO28Q9NVF7 368 aa26.7■■□□□ 1.87
SREBF1-208ENST00000469356 CPLX2Q6PUV4 134 aaKnown RBP26.69■■□□□ 1.86
SREBF1-208ENST00000469356 TBC1D8O95759 1140 aa26.68■■□□□ 1.86
SREBF1-208ENST00000469356 TTBK2Q6IQ55 1244 aa26.68■■□□□ 1.86
SREBF1-208ENST00000469356 ATG4CQ96DT6 458 aa26.68■■□□□ 1.86
SREBF1-208ENST00000469356 ZSCAN31Q96LW9 406 aaPredicted RBP26.68■■□□□ 1.86
SREBF1-208ENST00000469356 PRR12Q9ULL5 1215 aa26.68■■□□□ 1.86
SREBF1-208ENST00000469356 ADAMTS5Q9UNA0 930 aa26.68■■□□□ 1.86
SREBF1-208ENST00000469356 PARP14Q460N5 1801 aa26.68■■□□□ 1.86
SREBF1-208ENST00000469356 VWA5AO00534 786 aa26.67■■□□□ 1.86
SREBF1-208ENST00000469356 RXRAP19793 462 aa26.67■■□□□ 1.86
SREBF1-208ENST00000469356 PDIA3P30101 505 aaKnown RBP26.67■■□□□ 1.86
SREBF1-208ENST00000469356 CCNA1P78396 465 aa26.67■■□□□ 1.86
SREBF1-208ENST00000469356 FAM110CQ1W6H9 321 aa26.67■■□□□ 1.86
SREBF1-208ENST00000469356 CCDC144CPQ8IYA2 1237 aa26.67■■□□□ 1.86
SREBF1-208ENST00000469356 STAG2Q8N3U4 1231 aa26.67■■□□□ 1.86
SREBF1-208ENST00000469356 PAGR1Q9BTK6 254 aa26.67■■□□□ 1.86
SREBF1-208ENST00000469356 SLKQ9H2G2 1235 aaPredicted RBP26.67■■□□□ 1.86
SREBF1-208ENST00000469356 LIMCH1Q9UPQ0 1083 aa26.67■■□□□ 1.86
SREBF1-208ENST00000469356 SLC16A2P36021 539 aa26.66■■□□□ 1.86
SREBF1-208ENST00000469356 OAZ1P54368 228 aa26.66■■□□□ 1.86
SREBF1-208ENST00000469356 TRAF1Q13077 416 aa26.66■■□□□ 1.86
SREBF1-208ENST00000469356 NOM1Q5C9Z4 860 aaKnown RBP26.66■■□□□ 1.86
SREBF1-208ENST00000469356 C17orf99Q6UX52 265 aa26.66■■□□□ 1.86
SREBF1-208ENST00000469356 RASGRP2Q7LDG7 609 aa26.66■■□□□ 1.86
SREBF1-208ENST00000469356 CCAR1Q8IX12 1150 aaKnown RBP26.66■■□□□ 1.86
SREBF1-208ENST00000469356 GPRC5AQ8NFJ5 357 aa26.66■■□□□ 1.86
SREBF1-208ENST00000469356 UBA5Q9GZZ9 404 aa26.66■■□□□ 1.86
SREBF1-208ENST00000469356 MORF4L1Q9UBU8 362 aa26.66■■□□□ 1.86
SREBF1-208ENST00000469356 RLFQ13129 1914 aa26.66■■□□□ 1.86
SREBF1-208ENST00000469356 COPB2P35606 906 aa26.65■■□□□ 1.86
SREBF1-208ENST00000469356 RAB11FIP4Q86YS3 637 aa26.65■■□□□ 1.86
SREBF1-208ENST00000469356 ANKRD13CQ8N6S4 541 aa26.65■■□□□ 1.86
SREBF1-208ENST00000469356 SLC38A10Q9HBR0 1119 aa26.65■■□□□ 1.86
SREBF1-208ENST00000469356 CPA4Q9UI42 421 aa26.65■■□□□ 1.86
SREBF1-208ENST00000469356 NID2Q14112 1375 aa26.65■■□□□ 1.86
SREBF1-208ENST00000469356 CPLX1O14810 134 aa26.65■■□□□ 1.86
SREBF1-208ENST00000469356 KIF22Q14807 665 aa26.65■■□□□ 1.86
SREBF1-208ENST00000469356 ARHGEF6Q15052 776 aa26.65■■□□□ 1.86
SREBF1-208ENST00000469356 ADGRF4Q8IZF3 695 aa26.65■■□□□ 1.86
SREBF1-208ENST00000469356 SPZ1Q9BXG8 430 aa26.65■■□□□ 1.86
SREBF1-208ENST00000469356 VAT1LQ9HCJ6 419 aa26.65■■□□□ 1.86
SREBF1-208ENST00000469356 SH2B1Q9NRF2 756 aaPredicted RBP26.65■■□□□ 1.86
SREBF1-208ENST00000469356 RBPJLQ9UBG7 517 aa26.65■■□□□ 1.86
SREBF1-208ENST00000469356 ADGRA2Q96PE1 1338 aa26.64■■□□□ 1.86
SREBF1-208ENST00000469356 BCRP11274 1271 aa26.64■■□□□ 1.85
SREBF1-208ENST00000469356 ERVK-9P63128 1117 aa26.64■■□□□ 1.85
SREBF1-208ENST00000469356 ERVK-24P63145 666 aa26.64■■□□□ 1.85
SREBF1-208ENST00000469356 PLS1Q14651 629 aa26.64■■□□□ 1.85
SREBF1-208ENST00000469356 TMTC3Q6ZXV5 915 aa26.64■■□□□ 1.85
SREBF1-208ENST00000469356 NOL8Q76FK4 1167 aaKnown RBP26.64■■□□□ 1.85
SREBF1-208ENST00000469356 RANBP17Q9H2T7 1088 aaKnown RBP26.64■■□□□ 1.85
SREBF1-208ENST00000469356 RIOX1Q9H6W3 641 aa26.64■■□□□ 1.85
SREBF1-208ENST00000469356 TPCN1Q9ULQ1 816 aa26.64■■□□□ 1.85
SREBF1-208ENST00000469356 GPR25O00155 361 aa26.63■■□□□ 1.85
SREBF1-208ENST00000469356 ATP2A1O14983 1001 aa26.63■■□□□ 1.85
SREBF1-208ENST00000469356 SLC25A27O95847 323 aa26.63■■□□□ 1.85
SREBF1-208ENST00000469356 CCT2P78371 535 aaKnown RBP26.63■■□□□ 1.85
SREBF1-208ENST00000469356 SP3Q02447 781 aa26.63■■□□□ 1.85
SREBF1-208ENST00000469356 RRP36Q96EU6 259 aaKnown RBP26.63■■□□□ 1.85
SREBF1-208ENST00000469356 LARP6Q9BRS8 491 aaKnown RBP26.63■■□□□ 1.85
SREBF1-208ENST00000469356 TEX13BQ9BXU2 312 aa26.63■■□□□ 1.85
SREBF1-208ENST00000469356 CWC22Q9HCG8 908 aaKnown RBP26.63■■□□□ 1.85
SREBF1-208ENST00000469356 RBM27Q9P2N5 1060 aaKnown RBP26.63■■□□□ 1.85
SREBF1-208ENST00000469356 SEC63Q9UGP8 760 aaKnown RBP26.63■■□□□ 1.85
SREBF1-208ENST00000469356 HPS5Q9UPZ3 1129 aa26.63■■□□□ 1.85
SREBF1-208ENST00000469356 PFKFB2O60825 505 aa26.62■■□□□ 1.85
SREBF1-208ENST00000469356 CDKL5O76039 1030 aa26.62■■□□□ 1.85
SREBF1-208ENST00000469356 STAT3P40763 770 aa26.62■■□□□ 1.85
SREBF1-208ENST00000469356 AKAP17AQ02040 695 aaKnown RBP26.62■■□□□ 1.85
SREBF1-208ENST00000469356 STK3Q13188 491 aa26.62■■□□□ 1.85
SREBF1-208ENST00000469356 SPATC1LQ9H0A9 340 aa26.62■■□□□ 1.85
SREBF1-208ENST00000469356 MYH6P13533 1939 aa26.62■■□□□ 1.85
SREBF1-208ENST00000469356 FKTNO75072 461 aa26.61■■□□□ 1.85
SREBF1-208ENST00000469356 HSPA1AP0DMV8 641 aaKnown RBP26.61■■□□□ 1.85
SREBF1-208ENST00000469356 HSPA1BP0DMV9 641 aaKnown RBP26.61■■□□□ 1.85
SREBF1-208ENST00000469356 CPXCR1Q8N123 301 aa26.61■■□□□ 1.85
SREBF1-208ENST00000469356 JMJD4Q9H9V9 463 aa26.61■■□□□ 1.85
SREBF1-208ENST00000469356 BTBD7Q9P203 1132 aa26.61■■□□□ 1.85
SREBF1-208ENST00000469356 COL11A1P12107 1806 aaPredicted RBP26.6■■□□□ 1.85
SREBF1-208ENST00000469356 PLEKHA8P1O95397 391 aa26.6■■□□□ 1.85
SREBF1-208ENST00000469356 CDC27P30260 824 aa26.6■■□□□ 1.85
SREBF1-208ENST00000469356 ADD1P35611 737 aaKnown RBP26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms