RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 CTCFLQ8NI51 663 aaPredicted RBP9.49□□□□□ -0.89
NPHP3-204ENST00000469232 LPAR1Q92633 364 aa9.49□□□□□ -0.89
NPHP3-204ENST00000469232 RBM27Q9P2N5 1060 aaKnown RBP9.49□□□□□ -0.89
NPHP3-204ENST00000469232 SMC3Q9UQE7 1217 aa9.49□□□□□ -0.89
NPHP3-204ENST00000469232 AFG3L2Q9Y4W6 797 aa9.49□□□□□ -0.89
NPHP3-204ENST00000469232 PASKQ96RG2 1323 aa9.48□□□□□ -0.89
NPHP3-204ENST00000469232 SPDYE5A6NIY4 337 aa9.48□□□□□ -0.89
NPHP3-204ENST00000469232 CYTH3O43739 400 aa9.48□□□□□ -0.89
NPHP3-204ENST00000469232 PLEKHA8P1O95397 391 aa9.48□□□□□ -0.89
NPHP3-204ENST00000469232 BRD1O95696 1058 aa9.48□□□□□ -0.89
NPHP3-204ENST00000469232 PARP1P09874 1014 aaKnown RBP9.48□□□□□ -0.89
NPHP3-204ENST00000469232 PDCP20941 246 aa9.48□□□□□ -0.89
NPHP3-204ENST00000469232 ECE1P42892 770 aa9.48□□□□□ -0.89
NPHP3-204ENST00000469232 VGLL4Q14135 290 aa9.48□□□□□ -0.89
NPHP3-204ENST00000469232 RAB3GAP1Q15042 981 aa9.48□□□□□ -0.89
NPHP3-204ENST00000469232 PKN1Q16512 942 aa9.48□□□□□ -0.89
NPHP3-204ENST00000469232 SLFN13Q68D06 897 aa9.48□□□□□ -0.89
NPHP3-204ENST00000469232 ANKRD13AQ8IZ07 590 aa9.48□□□□□ -0.89
NPHP3-204ENST00000469232 LRRC47Q8N1G4 583 aaKnown RBP9.48□□□□□ -0.89
NPHP3-204ENST00000469232 PTCD2Q8WV60 388 aaKnown RBP9.48□□□□□ -0.89
NPHP3-204ENST00000469232 ZKSCAN4Q969J2 545 aaPredicted RBP9.48□□□□□ -0.89
NPHP3-204ENST00000469232 KRTAP3-3Q9BYR6 98 aa9.48□□□□□ -0.89
NPHP3-204ENST00000469232 KRTAP3-2Q9BYR7 98 aa9.48□□□□□ -0.89
NPHP3-204ENST00000469232 CHMP5Q9NZZ3 219 aa9.48□□□□□ -0.89
NPHP3-204ENST00000469232 DAXXQ9UER7 740 aaPredicted RBP9.48□□□□□ -0.89
NPHP3-204ENST00000469232 KCNH4Q9UQ05 1017 aa9.48□□□□□ -0.89
NPHP3-204ENST00000469232 ZDHHC9Q9Y397 364 aa9.48□□□□□ -0.89
NPHP3-204ENST00000469232 TRPM7Q96QT4 1865 aa9.48□□□□□ -0.89
NPHP3-204ENST00000469232 PTPRFP10586 1907 aa9.47□□□□□ -0.89
NPHP3-204ENST00000469232 C19orf81C9J6K1 198 aa9.47□□□□□ -0.89
NPHP3-204ENST00000469232 TRAF5O00463 557 aa9.47□□□□□ -0.89
NPHP3-204ENST00000469232 CPLX1O14810 134 aa9.47□□□□□ -0.89
NPHP3-204ENST00000469232 DEXIO95424 95 aa9.47□□□□□ -0.89
NPHP3-204ENST00000469232 SYT1P21579 422 aa9.47□□□□□ -0.89
NPHP3-204ENST00000469232 BACE1P56817 501 aa9.47□□□□□ -0.89
NPHP3-204ENST00000469232 PPATQ06203 517 aa9.47□□□□□ -0.89
NPHP3-204ENST00000469232 USP17L2Q6R6M4 530 aa9.47□□□□□ -0.89
NPHP3-204ENST00000469232 CLEC17AQ6ZS10 378 aa9.47□□□□□ -0.89
NPHP3-204ENST00000469232 ARMC9Q7Z3E5 817 aa9.47□□□□□ -0.89
NPHP3-204ENST00000469232 ERO1BQ86YB8 467 aa9.47□□□□□ -0.89
NPHP3-204ENST00000469232 RAB11FIP4Q86YS3 637 aa9.47□□□□□ -0.89
NPHP3-204ENST00000469232 ZNF280CQ8ND82 737 aa9.47□□□□□ -0.89
NPHP3-204ENST00000469232 RBM46Q8TBY0 533 aaKnown RBP9.47□□□□□ -0.89
NPHP3-204ENST00000469232 NUP133Q8WUM0 1156 aa9.47□□□□□ -0.89
NPHP3-204ENST00000469232 AS3MTQ9HBK9 375 aa9.47□□□□□ -0.89
NPHP3-204ENST00000469232 GOPCQ9HD26 462 aa9.47□□□□□ -0.89
NPHP3-204ENST00000469232 PICK1Q9NRD5 415 aa9.47□□□□□ -0.89
NPHP3-204ENST00000469232 EMILIN3Q9NT22 766 aa9.47□□□□□ -0.89
NPHP3-204ENST00000469232 ORC3Q9UBD5 711 aaPredicted RBP9.47□□□□□ -0.89
NPHP3-204ENST00000469232 KIF3AQ9Y496 699 aa9.47□□□□□ -0.89
NPHP3-204ENST00000469232 RLFQ13129 1914 aa9.46□□□□□ -0.89
NPHP3-204ENST00000469232 LOC285556D6RIA3 1793 aa9.46□□□□□ -0.89
NPHP3-204ENST00000469232 USP17L10C9JJH3 530 aa9.46□□□□□ -0.89
NPHP3-204ENST00000469232 KLRF2D3W0D1 207 aa9.46□□□□□ -0.89
NPHP3-204ENST00000469232 CXCL11O14625 94 aa9.46□□□□□ -0.89
NPHP3-204ENST00000469232 WDR46O15213 610 aaKnown RBP9.46□□□□□ -0.89
NPHP3-204ENST00000469232 USP14P54578 494 aa9.46□□□□□ -0.89
NPHP3-204ENST00000469232 NUCB2P80303 420 aa9.46□□□□□ -0.89
NPHP3-204ENST00000469232 PPP1R15BQ5SWA1 713 aa9.46□□□□□ -0.89
NPHP3-204ENST00000469232 CST9Q5W186 159 aa9.46□□□□□ -0.89
NPHP3-204ENST00000469232 RASGRP2Q7LDG7 609 aa9.46□□□□□ -0.89
NPHP3-204ENST00000469232 TEX2Q8IWB9 1127 aa9.46□□□□□ -0.89
NPHP3-204ENST00000469232 CCDC144CPQ8IYA2 1237 aa9.46□□□□□ -0.89
NPHP3-204ENST00000469232 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.46□□□□□ -0.89
NPHP3-204ENST00000469232 FZD1Q9UP38 647 aa9.46□□□□□ -0.89
NPHP3-204ENST00000469232 MTMR6Q9Y217 621 aa9.46□□□□□ -0.89
NPHP3-204ENST00000469232 HSP90AA1P07900 732 aaKnown RBP9.45□□□□□ -0.9
NPHP3-204ENST00000469232 BMP3P12645 472 aa9.45□□□□□ -0.9
NPHP3-204ENST00000469232 SSRP1Q08945 709 aaKnown RBP9.45□□□□□ -0.9
NPHP3-204ENST00000469232 PPIL2Q13356 520 aa9.45□□□□□ -0.9
NPHP3-204ENST00000469232 MOGSQ13724 837 aa9.45□□□□□ -0.9
NPHP3-204ENST00000469232 PFKFB3Q16875 520 aaPredicted RBP9.45□□□□□ -0.9
NPHP3-204ENST00000469232 FBXO18Q8NFZ0 1043 aa9.45□□□□□ -0.9
NPHP3-204ENST00000469232 PHKBQ93100 1093 aa9.45□□□□□ -0.9
NPHP3-204ENST00000469232 SHISA4Q96DD7 197 aa9.45□□□□□ -0.9
NPHP3-204ENST00000469232 SH3GLB2Q9NR46 395 aa9.45□□□□□ -0.9
NPHP3-204ENST00000469232 CSADQ9Y600 493 aa9.45□□□□□ -0.9
NPHP3-204ENST00000469232 ZHX2Q9Y6X8 837 aa9.45□□□□□ -0.9
NPHP3-204ENST00000469232 PARP14Q460N5 1801 aa9.45□□□□□ -0.9
NPHP3-204ENST00000469232 A0A0G2JLL6 359 aaPredicted RBP9.45□□□□□ -0.9
NPHP3-204ENST00000469232 hCG_1984214I3L0E3 225 aa9.45□□□□□ -0.9
NPHP3-204ENST00000469232 STX6O43752 255 aa9.45□□□□□ -0.9
NPHP3-204ENST00000469232 SLC1A4P43007 532 aa9.45□□□□□ -0.9
NPHP3-204ENST00000469232 FMR1Q06787 632 aaKnown RBP eCLIP9.45□□□□□ -0.9
NPHP3-204ENST00000469232 SPP2Q13103 211 aa9.45□□□□□ -0.9
NPHP3-204ENST00000469232 NPY5RQ15761 445 aa9.45□□□□□ -0.9
NPHP3-204ENST00000469232 MOB2Q70IA6 237 aa9.45□□□□□ -0.9
NPHP3-204ENST00000469232 PRRT2Q7Z6L0 340 aaPredicted RBP9.45□□□□□ -0.9
NPHP3-204ENST00000469232 CCDC84Q86UT8 332 aaPredicted RBP9.45□□□□□ -0.9
NPHP3-204ENST00000469232 FAM160B2Q86V87 743 aa9.45□□□□□ -0.9
NPHP3-204ENST00000469232 TRIM22Q8IYM9 498 aa9.45□□□□□ -0.9
NPHP3-204ENST00000469232 ZNF713Q8N859 430 aaPredicted RBP9.45□□□□□ -0.9
NPHP3-204ENST00000469232 WASF1Q92558 559 aa9.45□□□□□ -0.9
NPHP3-204ENST00000469232 CLMNQ96JQ2 1002 aa9.45□□□□□ -0.9
NPHP3-204ENST00000469232 JMJD4Q9H9V9 463 aa9.45□□□□□ -0.9
NPHP3-204ENST00000469232 GPBP1L1Q9HC44 474 aaPredicted RBP9.45□□□□□ -0.9
NPHP3-204ENST00000469232 GBA2Q9HCG7 927 aaPredicted RBP9.45□□□□□ -0.9
NPHP3-204ENST00000469232 NAP1L2Q9ULW6 460 aaPredicted RBP9.45□□□□□ -0.9
NPHP3-204ENST00000469232 ADAMTS5Q9UNA0 930 aa9.45□□□□□ -0.9
NPHP3-204ENST00000469232 V9GY48 417 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms