RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 ZNF174Q15697 407 aa16.06■□□□□ 0.16
SMARCD3-205ENST00000469154 RAD9BQ6WBX8 426 aa16.06■□□□□ 0.16
SMARCD3-205ENST00000469154 IQUBQ8NA54 791 aa16.06■□□□□ 0.16
SMARCD3-205ENST00000469154 TUBB2BQ9BVA1 445 aa16.06■□□□□ 0.16
SMARCD3-205ENST00000469154 KIF5CO60282 957 aa16.05■□□□□ 0.16
SMARCD3-205ENST00000469154 SPAG1Q07617 926 aa16.05■□□□□ 0.16
SMARCD3-205ENST00000469154 NPY5RQ15761 445 aa16.05■□□□□ 0.16
SMARCD3-205ENST00000469154 CTCFLQ8NI51 663 aaPredicted RBP16.05■□□□□ 0.16
SMARCD3-205ENST00000469154 CTNND2Q9UQB3 1225 aa16.05■□□□□ 0.16
SMARCD3-205ENST00000469154 COL11A2P13942 1736 aaPredicted RBP16.05■□□□□ 0.16
SMARCD3-205ENST00000469154 hCG_1642624A0A1W2PR95 340 aa16.05■□□□□ 0.16
SMARCD3-205ENST00000469154 SEC31AO94979 1220 aaKnown RBP16.05■□□□□ 0.16
SMARCD3-205ENST00000469154 GYG1P46976 350 aa16.05■□□□□ 0.16
SMARCD3-205ENST00000469154 DYNLL1P63167 89 aaKnown RBP16.05■□□□□ 0.16
SMARCD3-205ENST00000469154 CAVIN4Q5BKX8 364 aa16.05■□□□□ 0.16
SMARCD3-205ENST00000469154 RASGRP2Q7LDG7 609 aa16.05■□□□□ 0.16
SMARCD3-205ENST00000469154 LIMA1Q9UHB6 759 aaKnown RBP16.05■□□□□ 0.16
SMARCD3-205ENST00000469154 C10orf71Q711Q0 1435 aa16.05■□□□□ 0.16
SMARCD3-205ENST00000469154 CCDC88AQ3V6T2 1871 aa16.04■□□□□ 0.16
SMARCD3-205ENST00000469154 KIAA1551Q9HCM1 1747 aa16.04■□□□□ 0.16
SMARCD3-205ENST00000469154 WNT7AO00755 349 aa16.04■□□□□ 0.16
SMARCD3-205ENST00000469154 GTPBP6O43824 516 aaPredicted RBP16.04■□□□□ 0.16
SMARCD3-205ENST00000469154 ORC4O43929 436 aa16.04■□□□□ 0.16
SMARCD3-205ENST00000469154 KLRK1P26718 216 aa16.04■□□□□ 0.16
SMARCD3-205ENST00000469154 CASP1P29466 404 aa16.04■□□□□ 0.16
SMARCD3-205ENST00000469154 GPSM2P81274 684 aa16.04■□□□□ 0.16
SMARCD3-205ENST00000469154 PTGDRQ13258 359 aa16.04■□□□□ 0.16
SMARCD3-205ENST00000469154 E2F4Q16254 413 aa16.04■□□□□ 0.16
SMARCD3-205ENST00000469154 UBXN6Q9BZV1 441 aa16.04■□□□□ 0.16
SMARCD3-205ENST00000469154 ARFGAP3Q9NP61 516 aa16.04■□□□□ 0.16
SMARCD3-205ENST00000469154 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.04■□□□□ 0.16
SMARCD3-205ENST00000469154 XDHP47989 1333 aa16.04■□□□□ 0.16
SMARCD3-205ENST00000469154 TBC1D8O95759 1140 aa16.04■□□□□ 0.16
SMARCD3-205ENST00000469154 TXLNAP40222 546 aa16.04■□□□□ 0.16
SMARCD3-205ENST00000469154 TRIM14Q14142 442 aa16.04■□□□□ 0.16
SMARCD3-205ENST00000469154 STYK1Q6J9G0 422 aa16.04■□□□□ 0.16
SMARCD3-205ENST00000469154 CTR9Q6PD62 1173 aa16.04■□□□□ 0.16
SMARCD3-205ENST00000469154 CEP112Q8N8E3 955 aa16.04■□□□□ 0.16
SMARCD3-205ENST00000469154 ANKRD20A12PQ8NF67 263 aa16.04■□□□□ 0.16
SMARCD3-205ENST00000469154 LZTFL1Q9NQ48 299 aa16.04■□□□□ 0.16
SMARCD3-205ENST00000469154 PPP1R1BQ9UD71 204 aaPredicted RBP16.04■□□□□ 0.16
SMARCD3-205ENST00000469154 RWDD2AQ9UIY3 292 aa16.04■□□□□ 0.16
SMARCD3-205ENST00000469154 TTF2Q9UNY4 1162 aaKnown RBP16.04■□□□□ 0.16
SMARCD3-205ENST00000469154 CYP2D7A0A087X1C5 515 aa16.03■□□□□ 0.16
SMARCD3-205ENST00000469154 POTEB2H3BUK9 544 aa16.03■□□□□ 0.16
SMARCD3-205ENST00000469154 SMIM22K7EJ46 135 aa16.03■□□□□ 0.16
SMARCD3-205ENST00000469154 SRGAP1Q7Z6B7 1085 aa16.03■□□□□ 0.16
SMARCD3-205ENST00000469154 TMTC1Q8IUR5 882 aa16.03■□□□□ 0.16
SMARCD3-205ENST00000469154 SP8Q8IXZ3 490 aa16.03■□□□□ 0.16
SMARCD3-205ENST00000469154 SMYD4Q8IYR2 804 aaPredicted RBP16.03■□□□□ 0.16
SMARCD3-205ENST00000469154 CPLX3Q8WVH0 158 aa16.03■□□□□ 0.16
SMARCD3-205ENST00000469154 PARD6BQ9BYG5 372 aa16.03■□□□□ 0.16
SMARCD3-205ENST00000469154 RMND1Q9NWS8 449 aa16.03■□□□□ 0.16
SMARCD3-205ENST00000469154 ATP6V0A2Q9Y487 856 aa16.03■□□□□ 0.16
SMARCD3-205ENST00000469154 SRCAPQ6ZRS2 3230 aa16.03■□□□□ 0.16
SMARCD3-205ENST00000469154 SCG2P13521 617 aa16.03■□□□□ 0.16
SMARCD3-205ENST00000469154 CASP14P31944 242 aa16.03■□□□□ 0.16
SMARCD3-205ENST00000469154 TUBB4BP68371 445 aa16.03■□□□□ 0.16
SMARCD3-205ENST00000469154 BRD3Q15059 726 aa16.03■□□□□ 0.16
SMARCD3-205ENST00000469154 RRAGBQ5VZM2 374 aa16.03■□□□□ 0.16
SMARCD3-205ENST00000469154 PDXDC2PQ6P474 469 aa16.03■□□□□ 0.16
SMARCD3-205ENST00000469154 TMC4Q7Z404 712 aa16.03■□□□□ 0.16
SMARCD3-205ENST00000469154 GPR101Q96P66 508 aaPredicted RBP16.03■□□□□ 0.16
SMARCD3-205ENST00000469154 ZNF219Q9P2Y4 722 aaPredicted RBP16.03■□□□□ 0.16
SMARCD3-205ENST00000469154 CDC23Q9UJX2 597 aa16.03■□□□□ 0.16
SMARCD3-205ENST00000469154 GYPCP04921 128 aa16.02■□□□□ 0.16
SMARCD3-205ENST00000469154 CYP2C19P33261 490 aa16.02■□□□□ 0.16
SMARCD3-205ENST00000469154 NLRP5P59047 1200 aa16.02■□□□□ 0.16
SMARCD3-205ENST00000469154 CHMP4BP1P59074 171 aa16.02■□□□□ 0.16
SMARCD3-205ENST00000469154 KRT31Q15323 416 aa16.02■□□□□ 0.16
SMARCD3-205ENST00000469154 TMED8Q6PL24 325 aaPredicted RBP16.02■□□□□ 0.16
SMARCD3-205ENST00000469154 SRBD1Q8N5C6 995 aaKnown RBP16.02■□□□□ 0.16
SMARCD3-205ENST00000469154 EPC1Q9H2F5 836 aa16.02■□□□□ 0.16
SMARCD3-205ENST00000469154 CCDC151A5D8V7 595 aa16.02■□□□□ 0.15
SMARCD3-205ENST00000469154 UFL1O94874 794 aa16.02■□□□□ 0.15
SMARCD3-205ENST00000469154 PAK1Q13153 545 aa16.02■□□□□ 0.15
SMARCD3-205ENST00000469154 NOM1Q5C9Z4 860 aaKnown RBP16.02■□□□□ 0.15
SMARCD3-205ENST00000469154 TXNRD3Q86VQ6 643 aa16.02■□□□□ 0.15
SMARCD3-205ENST00000469154 CNKSR1Q969H4 720 aa16.02■□□□□ 0.15
SMARCD3-205ENST00000469154 FAM84BQ96KN1 310 aaPredicted RBP16.02■□□□□ 0.15
SMARCD3-205ENST00000469154 SGIP1Q9BQI5 828 aa16.02■□□□□ 0.15
SMARCD3-205ENST00000469154 LEMD3Q9Y2U8 911 aa16.02■□□□□ 0.15
SMARCD3-205ENST00000469154 PDS5AQ29RF7 1337 aaKnown RBP16.01■□□□□ 0.15
SMARCD3-205ENST00000469154 LRRC10BA6NIK2 292 aa16.01■□□□□ 0.15
SMARCD3-205ENST00000469154 N4BP3O15049 544 aa16.01■□□□□ 0.15
SMARCD3-205ENST00000469154 DPEP1P16444 411 aa16.01■□□□□ 0.15
SMARCD3-205ENST00000469154 COPB1P53618 953 aaKnown RBP16.01■□□□□ 0.15
SMARCD3-205ENST00000469154 PFKFB3Q16875 520 aaPredicted RBP16.01■□□□□ 0.15
SMARCD3-205ENST00000469154 ZNF658Q5TYW1 1059 aaPredicted RBP16.01■□□□□ 0.15
SMARCD3-205ENST00000469154 ARL6IP4Q66PJ3 421 aaKnown RBP16.01■□□□□ 0.15
SMARCD3-205ENST00000469154 GGA1Q9UJY5 639 aa16.01■□□□□ 0.15
SMARCD3-205ENST00000469154 USP17L12C9JPN9 530 aa16■□□□□ 0.15
SMARCD3-205ENST00000469154 USP17L21D6R901 530 aa16■□□□□ 0.15
SMARCD3-205ENST00000469154 SASH3O75995 380 aa16■□□□□ 0.15
SMARCD3-205ENST00000469154 CALML3P27482 149 aa16■□□□□ 0.15
SMARCD3-205ENST00000469154 PTGER2P43116 358 aa16■□□□□ 0.15
SMARCD3-205ENST00000469154 FXR1P51114 621 aaKnown RBP eCLIP16■□□□□ 0.15
SMARCD3-205ENST00000469154 ZNF569Q5MCW4 686 aa16■□□□□ 0.15
SMARCD3-205ENST00000469154 PIK3AP1Q6ZUJ8 805 aa16■□□□□ 0.15
SMARCD3-205ENST00000469154 IRX2Q9BZI1 471 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms