RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 DDX11Q96FC9 970 aa14.66□□□□□ -0.06
COL5A1-207ENST00000469093 CLIP2Q9UDT6 1046 aa14.66□□□□□ -0.06
COL5A1-207ENST00000469093 CNPY2Q9Y2B0 182 aa14.66□□□□□ -0.06
COL5A1-207ENST00000469093 PARP14Q460N5 1801 aa14.66□□□□□ -0.06
COL5A1-207ENST00000469093 MYH8P13535 1937 aa14.65□□□□□ -0.06
COL5A1-207ENST00000469093 IGKV6D-41A0A0C4DH26 115 aa14.65□□□□□ -0.06
COL5A1-207ENST00000469093 A0A1W2PQ45 241 aaPredicted RBP14.65□□□□□ -0.06
COL5A1-207ENST00000469093 A0A1W2PQY0 241 aa14.65□□□□□ -0.06
COL5A1-207ENST00000469093 ATP2A1O14983 1001 aa14.65□□□□□ -0.06
COL5A1-207ENST00000469093 KIAA0355O15063 1070 aa14.65□□□□□ -0.06
COL5A1-207ENST00000469093 RNF113AO15541 343 aaKnown RBP14.65□□□□□ -0.06
COL5A1-207ENST00000469093 SMAD3P84022 425 aaKnown RBP14.65□□□□□ -0.06
COL5A1-207ENST00000469093 MAMDC4Q6UXC1 1216 aa14.65□□□□□ -0.06
COL5A1-207ENST00000469093 KLHDC9Q8NEP7 349 aa14.65□□□□□ -0.06
COL5A1-207ENST00000469093 APPBP2Q92624 585 aa14.65□□□□□ -0.06
COL5A1-207ENST00000469093 MKL1Q969V6 931 aa14.65□□□□□ -0.06
COL5A1-207ENST00000469093 TSEN34Q9BSV6 310 aaKnown RBP14.65□□□□□ -0.06
COL5A1-207ENST00000469093 COL25A1Q9BXS0 654 aaPredicted RBP14.65□□□□□ -0.06
COL5A1-207ENST00000469093 DCTPP1Q9H773 170 aa14.65□□□□□ -0.06
COL5A1-207ENST00000469093 FAM184BQ9ULE4 1060 aa14.65□□□□□ -0.06
COL5A1-207ENST00000469093 COL11A1P12107 1806 aaPredicted RBP14.64□□□□□ -0.07
COL5A1-207ENST00000469093 LTBP2Q14767 1821 aa14.64□□□□□ -0.07
COL5A1-207ENST00000469093 ROBO3Q96MS0 1386 aa14.64□□□□□ -0.07
COL5A1-207ENST00000469093 PQBP1O60828 265 aaKnown RBP14.64□□□□□ -0.07
COL5A1-207ENST00000469093 SLC4A3P48751 1232 aa14.64□□□□□ -0.07
COL5A1-207ENST00000469093 ACLYP53396 1101 aa14.64□□□□□ -0.07
COL5A1-207ENST00000469093 FAAP100Q0VG06 881 aa14.64□□□□□ -0.07
COL5A1-207ENST00000469093 KCNA10Q16322 511 aa14.64□□□□□ -0.07
COL5A1-207ENST00000469093 TSHZ3Q63HK5 1081 aa14.64□□□□□ -0.07
COL5A1-207ENST00000469093 CCSAPQ6IQ19 270 aaPredicted RBP14.64□□□□□ -0.07
COL5A1-207ENST00000469093 ANKRD33Q7Z3H0 272 aa14.64□□□□□ -0.07
COL5A1-207ENST00000469093 ZNF444Q8N0Y2 327 aaPredicted RBP14.64□□□□□ -0.07
COL5A1-207ENST00000469093 CPXCR1Q8N123 301 aa14.64□□□□□ -0.07
COL5A1-207ENST00000469093 TOX2Q96NM4 488 aa14.64□□□□□ -0.07
COL5A1-207ENST00000469093 TTYH1Q9H313 450 aaPredicted RBP14.64□□□□□ -0.07
COL5A1-207ENST00000469093 EPB41L4AQ9HCS5 686 aaPredicted RBP14.64□□□□□ -0.07
COL5A1-207ENST00000469093 SYNGAP1Q96PV0 1343 aa14.64□□□□□ -0.07
COL5A1-207ENST00000469093 LAMA2P24043 3122 aaKnown RBP14.64□□□□□ -0.07
COL5A1-207ENST00000469093 PATL2C9JE40 543 aaKnown RBP14.63□□□□□ -0.07
COL5A1-207ENST00000469093 GPAA1O43292 621 aa14.63□□□□□ -0.07
COL5A1-207ENST00000469093 ZBED4O75132 1171 aa14.63□□□□□ -0.07
COL5A1-207ENST00000469093 PRDM1O75626 825 aa14.63□□□□□ -0.07
COL5A1-207ENST00000469093 RAG1P15918 1043 aa14.63□□□□□ -0.07
COL5A1-207ENST00000469093 ZNF467Q7Z7K2 595 aaPredicted RBP14.63□□□□□ -0.07
COL5A1-207ENST00000469093 KIFC2Q96AC6 838 aa14.63□□□□□ -0.07
COL5A1-207ENST00000469093 CEP95Q96GE4 821 aa14.63□□□□□ -0.07
COL5A1-207ENST00000469093 SLC38A10Q9HBR0 1119 aa14.63□□□□□ -0.07
COL5A1-207ENST00000469093 RAVER2Q9HCJ3 691 aaKnown RBP14.63□□□□□ -0.07
COL5A1-207ENST00000469093 STARD7Q9NQZ5 370 aa14.63□□□□□ -0.07
COL5A1-207ENST00000469093 TMEM39AQ9NV64 488 aa14.63□□□□□ -0.07
COL5A1-207ENST00000469093 MTMR4Q9NYA4 1195 aa14.63□□□□□ -0.07
COL5A1-207ENST00000469093 M0R2C6 588 aa14.62□□□□□ -0.07
COL5A1-207ENST00000469093 DUSP11O75319 330 aaKnown RBP14.62□□□□□ -0.07
COL5A1-207ENST00000469093 APPP05067 770 aa14.62□□□□□ -0.07
COL5A1-207ENST00000469093 ZFYP08048 801 aaPredicted RBP14.62□□□□□ -0.07
COL5A1-207ENST00000469093 GNAT2P19087 354 aa14.62□□□□□ -0.07
COL5A1-207ENST00000469093 IRX5P78411 483 aaPredicted RBP14.62□□□□□ -0.07
COL5A1-207ENST00000469093 ACVR2BQ13705 512 aa14.62□□□□□ -0.07
COL5A1-207ENST00000469093 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.62□□□□□ -0.07
COL5A1-207ENST00000469093 IFNL3Q8IZI9 196 aa14.62□□□□□ -0.07
COL5A1-207ENST00000469093 NUP133Q8WUM0 1156 aa14.62□□□□□ -0.07
COL5A1-207ENST00000469093 FGD4Q96M96 766 aa14.62□□□□□ -0.07
COL5A1-207ENST00000469093 ZNF287Q9HBT7 754 aa14.62□□□□□ -0.07
COL5A1-207ENST00000469093 FEM1BQ9UK73 627 aa14.62□□□□□ -0.07
COL5A1-207ENST00000469093 ZHX1Q9UKY1 873 aaPredicted RBP14.62□□□□□ -0.07
COL5A1-207ENST00000469093 SYNRGQ9UMZ2 1314 aa14.62□□□□□ -0.07
COL5A1-207ENST00000469093 MYADML2A6NDP7 307 aa14.61□□□□□ -0.07
COL5A1-207ENST00000469093 MOXD2PA6NHM9 499 aa14.61□□□□□ -0.07
COL5A1-207ENST00000469093 DCDC2CA8MYV0 355 aa14.61□□□□□ -0.07
COL5A1-207ENST00000469093 TTLL1O95922 423 aa14.61□□□□□ -0.07
COL5A1-207ENST00000469093 TDO2P48775 406 aa14.61□□□□□ -0.07
COL5A1-207ENST00000469093 FPGSQ05932 587 aa14.61□□□□□ -0.07
COL5A1-207ENST00000469093 ANKRD35Q8N283 1001 aa14.61□□□□□ -0.07
COL5A1-207ENST00000469093 GMCL1P1Q8NEA9 526 aa14.61□□□□□ -0.07
COL5A1-207ENST00000469093 CHST13Q8NET6 341 aa14.61□□□□□ -0.07
COL5A1-207ENST00000469093 NEDD1Q8NHV4 660 aa14.61□□□□□ -0.07
COL5A1-207ENST00000469093 GPATCH3Q96I76 525 aa14.61□□□□□ -0.07
COL5A1-207ENST00000469093 RNPC3Q96LT9 517 aaKnown RBP14.61□□□□□ -0.07
COL5A1-207ENST00000469093 ABHD16BQ9H3Z7 469 aa14.61□□□□□ -0.07
COL5A1-207ENST00000469093 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.61□□□□□ -0.07
COL5A1-207ENST00000469093 SYNPO2Q9UMS6 1093 aa14.61□□□□□ -0.07
COL5A1-207ENST00000469093 CTDP1Q9Y5B0 961 aaPredicted RBP14.61□□□□□ -0.07
COL5A1-207ENST00000469093 MYH7P12883 1935 aa14.6□□□□□ -0.07
COL5A1-207ENST00000469093 GREB1LQ9C091 1923 aaPredicted RBP14.6□□□□□ -0.07
COL5A1-207ENST00000469093 ADCY6O43306 1168 aa14.6□□□□□ -0.07
COL5A1-207ENST00000469093 TIMP1P01033 207 aa14.6□□□□□ -0.07
COL5A1-207ENST00000469093 CST5P28325 142 aaPredicted RBP14.6□□□□□ -0.07
COL5A1-207ENST00000469093 CDK7P50613 346 aa14.6□□□□□ -0.07
COL5A1-207ENST00000469093 OAZ1P54368 228 aa14.6□□□□□ -0.07
COL5A1-207ENST00000469093 CCDC144BQ3MJ40 725 aa14.6□□□□□ -0.07
COL5A1-207ENST00000469093 SLFN13Q68D06 897 aa14.6□□□□□ -0.07
COL5A1-207ENST00000469093 LRRC47Q8N1G4 583 aaKnown RBP14.6□□□□□ -0.07
COL5A1-207ENST00000469093 MAFAQ8NHW3 353 aaPredicted RBP14.6□□□□□ -0.07
COL5A1-207ENST00000469093 MYLIPQ8WY64 445 aa14.6□□□□□ -0.07
COL5A1-207ENST00000469093 SEC62Q99442 399 aaKnown RBP14.6□□□□□ -0.07
COL5A1-207ENST00000469093 PLXNA1Q9UIW2 1896 aa14.6□□□□□ -0.07
COL5A1-207ENST00000469093 ELP1O95163 1332 aa14.6□□□□□ -0.07
COL5A1-207ENST00000469093 ASGR1P07306 291 aa14.59□□□□□ -0.07
COL5A1-207ENST00000469093 C6orf222P0C671 652 aaPredicted RBP14.59□□□□□ -0.07
COL5A1-207ENST00000469093 BMP3P12645 472 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms