RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 SUGT1Q9Y2Z0 365 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 PPRC1Q5VV67 1664 aaKnown RBP5.52□□□□□ -1.53
SF3B1-207ENST00000468925 DUOX2Q9NRD8 1548 aa5.52□□□□□ -1.53
SF3B1-207ENST00000468925 CDC42BPAQ5VT25 1732 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 MYO5CQ9NQX4 1742 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 RPGRIP1LQ68CZ1 1315 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 ARHGEF5Q12774 1597 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 SPATA31D1Q6ZQQ2 1576 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 YTHDC2Q9H6S0 1430 aaKnown RBP5.51□□□□□ -1.53
SF3B1-207ENST00000468925 USP17L15C9J2P7 530 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 USP17L10C9JJH3 530 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 USP17L13C9JLJ4 530 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 USP17L12C9JPN9 530 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 USP17L11C9JVI0 530 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 USP17L21D6R901 530 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 USP17L18D6R9N7 530 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 USP17L22D6RA61 530 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 USP17L17D6RBQ6 530 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 USP17L19D6RCP7 530 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 USP17L20D6RJB6 530 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 LILRB5O75023 590 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 GADD45BO75293 160 aaPredicted RBP5.51□□□□□ -1.53
SF3B1-207ENST00000468925 PPFIA2O75334 1257 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 SNUPNO95149 360 aaKnown RBP5.51□□□□□ -1.53
SF3B1-207ENST00000468925 PECAM1P16284 738 aaPredicted RBP5.51□□□□□ -1.53
SF3B1-207ENST00000468925 SERPINB4P48594 390 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 CCZ1BP86790 482 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 CCZ1P86791 482 aaPredicted RBP5.51□□□□□ -1.53
SF3B1-207ENST00000468925 TAGLNQ01995 201 aaKnown RBP5.51□□□□□ -1.53
SF3B1-207ENST00000468925 MLLT1Q03111 559 aaPredicted RBP5.51□□□□□ -1.53
SF3B1-207ENST00000468925 USP17L24Q0WX57 530 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 SCRN1Q12765 414 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 LRMPQ12912 555 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 NAA30Q147X3 362 aaPredicted RBP5.51□□□□□ -1.53
SF3B1-207ENST00000468925 SLC5A9Q2M3M2 681 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 ANO6Q4KMQ2 910 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 VPS53Q5VIR6 699 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 PSAPL1Q6NUJ1 521 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 SHISA2Q6UWI4 295 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 LRRC31Q6UY01 552 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 FBXO33Q7Z6M2 555 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 NOP9Q86U38 636 aaKnown RBP5.51□□□□□ -1.53
SF3B1-207ENST00000468925 IQCA1Q86XH1 822 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 CEP57L1Q8IYX8 460 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 DRAXINQ8NBI3 349 aaPredicted RBP5.51□□□□□ -1.53
SF3B1-207ENST00000468925 MSANTD4Q8NCY6 345 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 SSH1Q8WYL5 1049 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 FAXDC2Q96IV6 333 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 RPGRIP1Q96KN7 1286 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 PPP1R13BQ96KQ4 1090 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 BAG1Q99933 345 aaPredicted RBP5.51□□□□□ -1.53
SF3B1-207ENST00000468925 ST7Q9NRC1 585 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 DNAJB12Q9NXW2 375 aaKnown RBP5.51□□□□□ -1.53
SF3B1-207ENST00000468925 VPS18Q9P253 973 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 CFDP1Q9UEE9 299 aaPredicted RBP5.51□□□□□ -1.53
SF3B1-207ENST00000468925 NAGPAQ9UK23 515 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 NOB1Q9ULX3 412 aaKnown RBP5.51□□□□□ -1.53
SF3B1-207ENST00000468925 BCS1LQ9Y276 419 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 USP20Q9Y2K6 914 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 TMA7Q9Y2S6 64 aaKnown RBP5.51□□□□□ -1.53
SF3B1-207ENST00000468925 ABCA9Q8IUA7 1624 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 A2MP01023 1474 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 ZNF518AQ6AHZ1 1483 aa5.51□□□□□ -1.53
SF3B1-207ENST00000468925 TROQ12816 1431 aaPredicted RBP5.5□□□□□ -1.53
SF3B1-207ENST00000468925 PDLIM1O00151 329 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 ABLIM1O14639 778 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 ARHGAP6O43182 974 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 AP5Z1O43299 807 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 KINO60870 393 aaKnown RBP5.5□□□□□ -1.53
SF3B1-207ENST00000468925 CDKL5O76039 1030 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 IMPDH2P12268 514 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 CPB1P15086 417 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 GSPT1P15170 499 aaKnown RBP5.5□□□□□ -1.53
SF3B1-207ENST00000468925 YBX3P16989 372 aaKnown RBP eCLIP5.5□□□□□ -1.53
SF3B1-207ENST00000468925 CD151P48509 253 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 AMPHP49418 695 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 KCNQ4P56696 695 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 PPP2R3AQ06190 1150 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 G3BP1Q13283 466 aaKnown RBP eCLIP5.5□□□□□ -1.53
SF3B1-207ENST00000468925 PTK7Q13308 1070 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 DGKZQ13574 1117 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 PDIA5Q14554 519 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 ANKRD1Q15327 319 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 CDC37Q16543 378 aaPredicted RBP5.5□□□□□ -1.53
SF3B1-207ENST00000468925 KIAA0753Q2KHM9 967 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 TSNAXIP1Q2TAA8 658 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 ISM2Q6H9L7 571 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 WDR93Q6P2C0 686 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 POTEAQ6S8J7 498 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 C20orf204Q6ZNR8 217 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 EP400NLQ6ZTU2 488 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 ARMC9Q7Z3E5 817 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 MFN1Q8IWA4 741 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 ZNF483Q8TF39 744 aaPredicted RBP5.5□□□□□ -1.53
SF3B1-207ENST00000468925 LZICQ8WZA0 190 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 N4BP2L2Q92802 583 aaPredicted RBP5.5□□□□□ -1.53
SF3B1-207ENST00000468925 GPATCH3Q96I76 525 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 CRACR2AQ9BSW2 395 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 PARD6BQ9BYG5 372 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 TM6SF1Q9BZW5 370 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms