RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 hCG_1984214I3L0E3 225 aa13.11□□□□□ -0.31
MSH5-214ENST00000468602 K7ELQ4 463 aaPredicted RBP13.11□□□□□ -0.31
MSH5-214ENST00000468602 CYTH3O43739 400 aa13.11□□□□□ -0.31
MSH5-214ENST00000468602 ST3GAL1Q11201 340 aa13.11□□□□□ -0.31
MSH5-214ENST00000468602 SCRN1Q12765 414 aa13.11□□□□□ -0.31
MSH5-214ENST00000468602 SLC35G1Q2M3R5 365 aa13.11□□□□□ -0.31
MSH5-214ENST00000468602 NOM1Q5C9Z4 860 aaKnown RBP13.11□□□□□ -0.31
MSH5-214ENST00000468602 FAM83BQ5T0W9 1011 aa13.11□□□□□ -0.31
MSH5-214ENST00000468602 TREML2Q5T2D2 321 aa13.11□□□□□ -0.31
MSH5-214ENST00000468602 OTUD7BQ6GQQ9 843 aa13.11□□□□□ -0.31
MSH5-214ENST00000468602 CYP4F22Q6NT55 531 aa13.11□□□□□ -0.31
MSH5-214ENST00000468602 NBPF11Q86T75 865 aa13.11□□□□□ -0.31
MSH5-214ENST00000468602 MICU3Q86XE3 530 aa13.11□□□□□ -0.31
MSH5-214ENST00000468602 IFNL1Q8IU54 200 aa13.11□□□□□ -0.31
MSH5-214ENST00000468602 STAG2Q8N3U4 1231 aa13.11□□□□□ -0.31
MSH5-214ENST00000468602 ZNF713Q8N859 430 aaPredicted RBP13.11□□□□□ -0.31
MSH5-214ENST00000468602 REPS2Q8NFH8 660 aa13.11□□□□□ -0.31
MSH5-214ENST00000468602 SMARCC2Q8TAQ2 1214 aa13.11□□□□□ -0.31
MSH5-214ENST00000468602 SLF1Q9BQI6 1058 aa13.11□□□□□ -0.31
MSH5-214ENST00000468602 RNF26Q9BY78 433 aaPredicted RBP13.11□□□□□ -0.31
MSH5-214ENST00000468602 SLKQ9H2G2 1235 aaPredicted RBP13.11□□□□□ -0.31
MSH5-214ENST00000468602 RANBP17Q9H2T7 1088 aaKnown RBP13.11□□□□□ -0.31
MSH5-214ENST00000468602 RPAP3Q9H6T3 665 aaPredicted RBP13.11□□□□□ -0.31
MSH5-214ENST00000468602 TMEM232C9JQI7 657 aa13.1□□□□□ -0.31
MSH5-214ENST00000468602 PRPF3O43395 683 aaKnown RBP13.1□□□□□ -0.31
MSH5-214ENST00000468602 CDKL5O76039 1030 aa13.1□□□□□ -0.31
MSH5-214ENST00000468602 VEGFBP49765 207 aa13.1□□□□□ -0.31
MSH5-214ENST00000468602 KIF23Q02241 960 aaPredicted RBP13.1□□□□□ -0.31
MSH5-214ENST00000468602 SPICE1Q8N0Z3 855 aa13.1□□□□□ -0.31
MSH5-214ENST00000468602 SRBD1Q8N5C6 995 aaKnown RBP13.1□□□□□ -0.31
MSH5-214ENST00000468602 SLC38A10Q9HBR0 1119 aa13.1□□□□□ -0.31
MSH5-214ENST00000468602 SPDYE16A6NNV3 312 aaPredicted RBP13.09□□□□□ -0.31
MSH5-214ENST00000468602 IGF2BP3O00425 579 aaKnown RBP eCLIP13.09□□□□□ -0.31
MSH5-214ENST00000468602 VWA5AO00534 786 aa13.09□□□□□ -0.31
MSH5-214ENST00000468602 LARGE1O95461 756 aa13.09□□□□□ -0.31
MSH5-214ENST00000468602 OSBPP22059 807 aa13.09□□□□□ -0.31
MSH5-214ENST00000468602 ADD1P35611 737 aaKnown RBP13.09□□□□□ -0.31
MSH5-214ENST00000468602 GCLCP48506 637 aaPredicted RBP13.09□□□□□ -0.31
MSH5-214ENST00000468602 GHRHRQ02643 423 aa13.09□□□□□ -0.31
MSH5-214ENST00000468602 TRAF1Q13077 416 aa13.09□□□□□ -0.31
MSH5-214ENST00000468602 SYDE2Q5VT97 1194 aa13.09□□□□□ -0.31
MSH5-214ENST00000468602 CPLX2Q6PUV4 134 aaKnown RBP13.09□□□□□ -0.31
MSH5-214ENST00000468602 KCTD1Q719H9 257 aa13.09□□□□□ -0.31
MSH5-214ENST00000468602 FAM43AQ8N2R8 423 aa13.09□□□□□ -0.31
MSH5-214ENST00000468602 NUP133Q8WUM0 1156 aa13.09□□□□□ -0.31
MSH5-214ENST00000468602 MYL10Q9BUA6 226 aa13.09□□□□□ -0.31
MSH5-214ENST00000468602 ASCC2Q9H1I8 757 aaPredicted RBP13.09□□□□□ -0.31
MSH5-214ENST00000468602 JMJD4Q9H9V9 463 aa13.09□□□□□ -0.31
MSH5-214ENST00000468602 TSHZ2Q9NRE2 1034 aa13.09□□□□□ -0.31
MSH5-214ENST00000468602 SAGE1Q9NXZ1 904 aa13.09□□□□□ -0.31
MSH5-214ENST00000468602 MORF4L1Q9UBU8 362 aa13.09□□□□□ -0.31
MSH5-214ENST00000468602 PRR12Q9ULL5 1215 aa13.09□□□□□ -0.31
MSH5-214ENST00000468602 CNTNAP5Q8WYK1 1306 aa13.09□□□□□ -0.31
MSH5-214ENST00000468602 PDHXO00330 501 aa13.08□□□□□ -0.32
MSH5-214ENST00000468602 ZBTB5O15062 677 aa13.08□□□□□ -0.32
MSH5-214ENST00000468602 CA12O43570 354 aa13.08□□□□□ -0.32
MSH5-214ENST00000468602 FMNL1O95466 1100 aaPredicted RBP13.08□□□□□ -0.32
MSH5-214ENST00000468602 CTDNEP1O95476 244 aa13.08□□□□□ -0.32
MSH5-214ENST00000468602 PDIA4P13667 645 aaKnown RBP13.08□□□□□ -0.32
MSH5-214ENST00000468602 HERVK_113P62684 666 aa13.08□□□□□ -0.32
MSH5-214ENST00000468602 HMGN5P82970 282 aaKnown RBP13.08□□□□□ -0.32
MSH5-214ENST00000468602 DGKZQ13574 1117 aa13.08□□□□□ -0.32
MSH5-214ENST00000468602 ZYXQ15942 572 aaKnown RBP13.08□□□□□ -0.32
MSH5-214ENST00000468602 TTBK2Q6IQ55 1244 aa13.08□□□□□ -0.32
MSH5-214ENST00000468602 POTEEQ6S8J3 1075 aa13.08□□□□□ -0.32
MSH5-214ENST00000468602 GADL1Q6ZQY3 521 aa13.08□□□□□ -0.32
MSH5-214ENST00000468602 RASGRP2Q7LDG7 609 aa13.08□□□□□ -0.32
MSH5-214ENST00000468602 ADGRF4Q8IZF3 695 aa13.08□□□□□ -0.32
MSH5-214ENST00000468602 SAMD3Q8N6K7 520 aa13.08□□□□□ -0.32
MSH5-214ENST00000468602 NSUN7Q8NE18 718 aaKnown RBP13.08□□□□□ -0.32
MSH5-214ENST00000468602 PARK7Q99497 189 aaKnown RBP13.08□□□□□ -0.32
MSH5-214ENST00000468602 RABGAP1Q9Y3P9 1069 aa13.08□□□□□ -0.32
MSH5-214ENST00000468602 BAZ2BQ9UIF8 2168 aaKnown RBP13.07□□□□□ -0.32
MSH5-214ENST00000468602 PNMA6FA0A0J9YX94 578 aa13.07□□□□□ -0.32
MSH5-214ENST00000468602 TLR2O60603 784 aa13.07□□□□□ -0.32
MSH5-214ENST00000468602 FLOT1O75955 427 aa13.07□□□□□ -0.32
MSH5-214ENST00000468602 PLEKHA8P1O95397 391 aa13.07□□□□□ -0.32
MSH5-214ENST00000468602 COPB2P35606 906 aa13.07□□□□□ -0.32
MSH5-214ENST00000468602 IRX3P78415 501 aaPredicted RBP13.07□□□□□ -0.32
MSH5-214ENST00000468602 MLLT1Q03111 559 aaPredicted RBP13.07□□□□□ -0.32
MSH5-214ENST00000468602 CCDC96Q2M329 555 aa13.07□□□□□ -0.32
MSH5-214ENST00000468602 TKFCQ3LXA3 575 aa13.07□□□□□ -0.32
MSH5-214ENST00000468602 HSCBQ8IWL3 235 aa13.07□□□□□ -0.32
MSH5-214ENST00000468602 ZIC5Q96T25 663 aa13.07□□□□□ -0.32
MSH5-214ENST00000468602 NUP88Q99567 741 aaPredicted RBP13.07□□□□□ -0.32
MSH5-214ENST00000468602 P2RX7Q99572 595 aaKnown RBP13.07□□□□□ -0.32
MSH5-214ENST00000468602 SH3GLB2Q9NR46 395 aa13.07□□□□□ -0.32
MSH5-214ENST00000468602 ZNF214Q9UL59 606 aaPredicted RBP13.07□□□□□ -0.32
MSH5-214ENST00000468602 ZNF536O15090 1300 aa13.07□□□□□ -0.32
MSH5-214ENST00000468602 CPLX1O14810 134 aa13.06□□□□□ -0.32
MSH5-214ENST00000468602 DEXIO95424 95 aa13.06□□□□□ -0.32
MSH5-214ENST00000468602 ICAM1P05362 532 aa13.06□□□□□ -0.32
MSH5-214ENST00000468602 GOLGA8HP0CJ92 632 aa13.06□□□□□ -0.32
MSH5-214ENST00000468602 BCRP11274 1271 aa13.06□□□□□ -0.32
MSH5-214ENST00000468602 RXRAP19793 462 aa13.06□□□□□ -0.32
MSH5-214ENST00000468602 CCT2P78371 535 aaKnown RBP13.06□□□□□ -0.32
MSH5-214ENST00000468602 BECN1Q14457 450 aa13.06□□□□□ -0.32
MSH5-214ENST00000468602 PKN1Q16512 942 aa13.06□□□□□ -0.32
MSH5-214ENST00000468602 FAM110CQ1W6H9 321 aa13.06□□□□□ -0.32
MSH5-214ENST00000468602 C17orf99Q6UX52 265 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms