RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 PORCNQ9H237 461 aa13.24□□□□□ -0.29
COL4A6-205ENST00000468338 BTBD7Q9P203 1132 aa13.24□□□□□ -0.29
COL4A6-205ENST00000468338 PDE4DIPQ5VU43 2346 aa13.24□□□□□ -0.29
COL4A6-205ENST00000468338 A0A0G2JMZ2 1700 aa13.24□□□□□ -0.29
COL4A6-205ENST00000468338 F5H6K3 240 aa13.23□□□□□ -0.29
COL4A6-205ENST00000468338 ADCY3O60266 1144 aa13.23□□□□□ -0.29
COL4A6-205ENST00000468338 MAPK4P31152 587 aa13.23□□□□□ -0.29
COL4A6-205ENST00000468338 MFAP1P55081 439 aaKnown RBP13.23□□□□□ -0.29
COL4A6-205ENST00000468338 TFAP4Q01664 338 aa13.23□□□□□ -0.29
COL4A6-205ENST00000468338 CTDSPL2Q05D32 466 aa13.23□□□□□ -0.29
COL4A6-205ENST00000468338 KLRC3Q07444 240 aa13.23□□□□□ -0.29
COL4A6-205ENST00000468338 CWC27Q6UX04 472 aaKnown RBP13.23□□□□□ -0.29
COL4A6-205ENST00000468338 SPICE1Q8N0Z3 855 aa13.23□□□□□ -0.29
COL4A6-205ENST00000468338 MB21D1Q8N884 522 aa13.23□□□□□ -0.29
COL4A6-205ENST00000468338 PAGR1Q9BTK6 254 aa13.23□□□□□ -0.29
COL4A6-205ENST00000468338 INCENPQ9NQS7 918 aa13.23□□□□□ -0.29
COL4A6-205ENST00000468338 BRCA2P51587 3418 aa13.23□□□□□ -0.29
COL4A6-205ENST00000468338 TTLL1O95922 423 aa13.22□□□□□ -0.29
COL4A6-205ENST00000468338 NDUFB10O96000 172 aa13.22□□□□□ -0.29
COL4A6-205ENST00000468338 XRCC5P13010 732 aaKnown RBP13.22□□□□□ -0.29
COL4A6-205ENST00000468338 CCNA1P78396 465 aa13.22□□□□□ -0.29
COL4A6-205ENST00000468338 ATP2B2Q01814 1243 aa13.22□□□□□ -0.29
COL4A6-205ENST00000468338 MLLT1Q03111 559 aaPredicted RBP13.22□□□□□ -0.29
COL4A6-205ENST00000468338 FAM47AQ5JRC9 791 aa13.22□□□□□ -0.29
COL4A6-205ENST00000468338 MORN1Q5T089 497 aa13.22□□□□□ -0.29
COL4A6-205ENST00000468338 DSCC1Q9BVC3 393 aa13.22□□□□□ -0.29
COL4A6-205ENST00000468338 TANGO6Q9C0B7 1094 aa13.22□□□□□ -0.29
COL4A6-205ENST00000468338 NBPF3Q9H094 633 aa13.22□□□□□ -0.29
COL4A6-205ENST00000468338 IL25Q9H293 177 aa13.22□□□□□ -0.29
COL4A6-205ENST00000468338 CDHR5Q9HBB8 845 aa13.22□□□□□ -0.29
COL4A6-205ENST00000468338 NPDC1Q9NQX5 325 aaPredicted RBP13.22□□□□□ -0.29
COL4A6-205ENST00000468338 IL17RBQ9NRM6 502 aa13.22□□□□□ -0.29
COL4A6-205ENST00000468338 DIAPH3Q9NSV4 1193 aa13.22□□□□□ -0.29
COL4A6-205ENST00000468338 CLIP2Q9UDT6 1046 aa13.22□□□□□ -0.29
COL4A6-205ENST00000468338 FLOT1O75955 427 aa13.21□□□□□ -0.29
COL4A6-205ENST00000468338 TSPY3P0CV98 308 aa13.21□□□□□ -0.29
COL4A6-205ENST00000468338 TSPY8P0CW00 308 aa13.21□□□□□ -0.29
COL4A6-205ENST00000468338 PCP11498 1178 aaKnown RBP13.21□□□□□ -0.29
COL4A6-205ENST00000468338 MTFR1Q15390 333 aa13.21□□□□□ -0.29
COL4A6-205ENST00000468338 GPR142Q7Z601 462 aa13.21□□□□□ -0.29
COL4A6-205ENST00000468338 GMCL1P1Q8NEA9 526 aa13.21□□□□□ -0.29
COL4A6-205ENST00000468338 SOCS4Q8WXH5 440 aa13.21□□□□□ -0.29
COL4A6-205ENST00000468338 ATG4CQ96DT6 458 aa13.21□□□□□ -0.29
COL4A6-205ENST00000468338 GPCPD1Q9NPB8 672 aa13.21□□□□□ -0.29
COL4A6-205ENST00000468338 FBXO28Q9NVF7 368 aa13.21□□□□□ -0.29
COL4A6-205ENST00000468338 PPP1R9AQ9ULJ8 1098 aa13.21□□□□□ -0.29
COL4A6-205ENST00000468338 ELNP15502 786 aa13.2□□□□□ -0.3
COL4A6-205ENST00000468338 CHMLP26374 656 aa13.2□□□□□ -0.3
COL4A6-205ENST00000468338 PPP4R3BQ5MIZ7 849 aa13.2□□□□□ -0.3
COL4A6-205ENST00000468338 FAM83BQ5T0W9 1011 aa13.2□□□□□ -0.3
COL4A6-205ENST00000468338 AKNAD1Q5T1N1 836 aa13.2□□□□□ -0.3
COL4A6-205ENST00000468338 TYW1BQ6NUM6 668 aa13.2□□□□□ -0.3
COL4A6-205ENST00000468338 CENPQQ7L2Z9 268 aaPredicted RBP13.2□□□□□ -0.3
COL4A6-205ENST00000468338 PLEKHH3Q7Z736 793 aa13.2□□□□□ -0.3
COL4A6-205ENST00000468338 SHCBP1Q8NEM2 672 aa13.2□□□□□ -0.3
COL4A6-205ENST00000468338 REPS2Q8NFH8 660 aa13.2□□□□□ -0.3
COL4A6-205ENST00000468338 STAG1Q8WVM7 1258 aa13.2□□□□□ -0.3
COL4A6-205ENST00000468338 NUDT12Q9BQG2 462 aa13.2□□□□□ -0.3
COL4A6-205ENST00000468338 REPIN1Q9BWE0 567 aaKnown RBP13.2□□□□□ -0.3
COL4A6-205ENST00000468338 MOV10L1Q9BXT6 1211 aaKnown RBP13.2□□□□□ -0.3
COL4A6-205ENST00000468338 SPATC1LQ9H0A9 340 aa13.2□□□□□ -0.3
COL4A6-205ENST00000468338 TCP11L1Q9NUJ3 509 aa13.2□□□□□ -0.3
COL4A6-205ENST00000468338 COL11A1P12107 1806 aaPredicted RBP13.2□□□□□ -0.3
COL4A6-205ENST00000468338 RAD50Q92878 1312 aa13.19□□□□□ -0.3
COL4A6-205ENST00000468338 LAMA4Q16363 1823 aa13.19□□□□□ -0.3
COL4A6-205ENST00000468338 SLC15A5A6NIM6 579 aa13.19□□□□□ -0.3
COL4A6-205ENST00000468338 TSPY2A6NKD2 308 aa13.19□□□□□ -0.3
COL4A6-205ENST00000468338 IGHA2P01877 340 aa13.19□□□□□ -0.3
COL4A6-205ENST00000468338 GJB1P08034 283 aa13.19□□□□□ -0.3
COL4A6-205ENST00000468338 HOXC6P09630 235 aa13.19□□□□□ -0.3
COL4A6-205ENST00000468338 EN2P19622 333 aaPredicted RBP13.19□□□□□ -0.3
COL4A6-205ENST00000468338 PTPREP23469 700 aa13.19□□□□□ -0.3
COL4A6-205ENST00000468338 NT5C2P49902 561 aa13.19□□□□□ -0.3
COL4A6-205ENST00000468338 UBXN2AP68543 259 aa13.19□□□□□ -0.3
COL4A6-205ENST00000468338 GRB14Q14449 540 aa13.19□□□□□ -0.3
COL4A6-205ENST00000468338 TBC1D10CQ8IV04 446 aa13.19□□□□□ -0.3
COL4A6-205ENST00000468338 NKX2-3Q8TAU0 364 aa13.19□□□□□ -0.3
COL4A6-205ENST00000468338 VWA5AO00534 786 aa13.18□□□□□ -0.3
COL4A6-205ENST00000468338 RANBP6O60518 1105 aaKnown RBP13.18□□□□□ -0.3
COL4A6-205ENST00000468338 NMT2O60551 498 aa13.18□□□□□ -0.3
COL4A6-205ENST00000468338 HMGCRP04035 888 aa13.18□□□□□ -0.3
COL4A6-205ENST00000468338 INHAP05111 366 aa13.18□□□□□ -0.3
COL4A6-205ENST00000468338 CCL5P13501 91 aa13.18□□□□□ -0.3
COL4A6-205ENST00000468338 CYP2B6P20813 491 aa13.18□□□□□ -0.3
COL4A6-205ENST00000468338 HAND2P61296 217 aa13.18□□□□□ -0.3
COL4A6-205ENST00000468338 MDM2Q00987 491 aaPredicted RBP13.18□□□□□ -0.3
COL4A6-205ENST00000468338 TMEM132BQ14DG7 1078 aa13.18□□□□□ -0.3
COL4A6-205ENST00000468338 MAP3K21Q5TCX8 1036 aa13.18□□□□□ -0.3
COL4A6-205ENST00000468338 MFSD6Q6ZSS7 791 aa13.18□□□□□ -0.3
COL4A6-205ENST00000468338 CCAR1Q8IX12 1150 aaKnown RBP13.18□□□□□ -0.3
COL4A6-205ENST00000468338 PRPF38AQ8NAV1 312 aaKnown RBP13.18□□□□□ -0.3
COL4A6-205ENST00000468338 TRIB2Q92519 343 aa13.18□□□□□ -0.3
COL4A6-205ENST00000468338 NUP88Q99567 741 aaPredicted RBP13.18□□□□□ -0.3
COL4A6-205ENST00000468338 RNF41Q9H4P4 317 aaPredicted RBP13.18□□□□□ -0.3
COL4A6-205ENST00000468338 PAK6Q9NQU5 681 aaPredicted RBP13.18□□□□□ -0.3
COL4A6-205ENST00000468338 ZNF214Q9UL59 606 aaPredicted RBP13.18□□□□□ -0.3
COL4A6-205ENST00000468338 PCDHGA10Q9Y5H3 936 aa13.18□□□□□ -0.3
COL4A6-205ENST00000468338 ZNF236Q9UL36 1845 aa13.18□□□□□ -0.3
COL4A6-205ENST00000468338 ZNFX1Q9P2E3 1918 aaKnown RBP13.17□□□□□ -0.3
COL4A6-205ENST00000468338 ZNF213O14771 459 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms