RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 ZNF653Q96CK0 615 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 STAMBPL1Q96FJ0 436 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 L3MBTL3Q96JM7 780 aaPredicted RBP10.28□□□□□ -0.76
LCA5-203ENST00000467898 SH3GL1Q99961 368 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 BHMT2Q9H2M3 363 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 DACT1Q9NYF0 836 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 N6AMT1Q9Y5N5 214 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 SPATA31A3Q5VYP0 1347 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 TARSL2A2RTX5 802 aaKnown RBP10.28□□□□□ -0.76
LCA5-203ENST00000467898 ZC3H6P61129 1189 aaKnown RBP10.28□□□□□ -0.76
LCA5-203ENST00000467898 NBPF14Q5TI25 921 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 THOC7Q6I9Y2 204 aaKnown RBP10.28□□□□□ -0.76
LCA5-203ENST00000467898 MPRIPQ6WCQ1 1025 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 CCAR1Q8IX12 1150 aaKnown RBP10.28□□□□□ -0.76
LCA5-203ENST00000467898 CKAP2LQ8IYA6 745 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 DHTKD1Q96HY7 919 aaPredicted RBP10.28□□□□□ -0.76
LCA5-203ENST00000467898 MAML3Q96JK9 1138 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 VCX3BQ9H321 246 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 VCX3AQ9NNX9 186 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 A0A1B0GVG6 124 aa10.27□□□□□ -0.77
LCA5-203ENST00000467898 EIF3FO00303 357 aaPredicted RBP10.27□□□□□ -0.77
LCA5-203ENST00000467898 CREB3L3Q68CJ9 461 aa10.27□□□□□ -0.77
LCA5-203ENST00000467898 DZIP1Q86YF9 867 aaKnown RBP10.27□□□□□ -0.77
LCA5-203ENST00000467898 TTC14Q96N46 770 aa10.27□□□□□ -0.77
LCA5-203ENST00000467898 CCDC85AQ96PX6 553 aaPredicted RBP10.27□□□□□ -0.77
LCA5-203ENST00000467898 SUGCTQ9HAC7 445 aa10.27□□□□□ -0.77
LCA5-203ENST00000467898 ZNF148Q9UQR1 794 aa10.27□□□□□ -0.77
LCA5-203ENST00000467898 MTMR7Q9Y216 660 aa10.27□□□□□ -0.77
LCA5-203ENST00000467898 KDM6AO15550 1401 aaPredicted RBP10.27□□□□□ -0.77
LCA5-203ENST00000467898 GOLGA6L4A6NEF3 574 aa10.27□□□□□ -0.77
LCA5-203ENST00000467898 ATP9BO43861 1147 aa10.27□□□□□ -0.77
LCA5-203ENST00000467898 CAMK4Q16566 473 aa10.27□□□□□ -0.77
LCA5-203ENST00000467898 ANKRD20A8PQ5CZ79 823 aa10.27□□□□□ -0.77
LCA5-203ENST00000467898 DHX40Q8IX18 779 aaKnown RBP10.27□□□□□ -0.77
LCA5-203ENST00000467898 SMC6Q96SB8 1091 aa10.27□□□□□ -0.77
LCA5-203ENST00000467898 PHAXQ9H814 394 aaKnown RBP10.27□□□□□ -0.77
LCA5-203ENST00000467898 PREBQ9HCU5 417 aa10.27□□□□□ -0.77
LCA5-203ENST00000467898 TFIP11Q9UBB9 837 aaKnown RBP10.27□□□□□ -0.77
LCA5-203ENST00000467898 PPP2R2CQ9Y2T4 447 aa10.27□□□□□ -0.77
LCA5-203ENST00000467898 SH3GLB1Q9Y371 365 aa10.27□□□□□ -0.77
LCA5-203ENST00000467898 SLC4A7Q9Y6M7 1214 aa10.27□□□□□ -0.77
LCA5-203ENST00000467898 MRC1P22897 1456 aa10.27□□□□□ -0.77
LCA5-203ENST00000467898 CPDO75976 1380 aa10.26□□□□□ -0.77
LCA5-203ENST00000467898 PARP4Q9UKK3 1724 aaKnown RBP10.26□□□□□ -0.77
LCA5-203ENST00000467898 CBFA2T2O43439 604 aa10.26□□□□□ -0.77
LCA5-203ENST00000467898 FLOT1O75955 427 aa10.26□□□□□ -0.77
LCA5-203ENST00000467898 ALADP13716 330 aa10.26□□□□□ -0.77
LCA5-203ENST00000467898 ELF3P78545 371 aaPredicted RBP10.26□□□□□ -0.77
LCA5-203ENST00000467898 DNM1Q05193 864 aaKnown RBP10.26□□□□□ -0.77
LCA5-203ENST00000467898 SEPT2Q15019 361 aa10.26□□□□□ -0.77
LCA5-203ENST00000467898 RCN1Q15293 331 aa10.26□□□□□ -0.77
LCA5-203ENST00000467898 TBC1D10BQ4KMP7 808 aaPredicted RBP10.26□□□□□ -0.77
LCA5-203ENST00000467898 SLC4A10Q6U841 1118 aa10.26□□□□□ -0.77
LCA5-203ENST00000467898 KCTD17Q8N5Z5 321 aa10.26□□□□□ -0.77
LCA5-203ENST00000467898 TRIML1Q8N9V2 468 aa10.26□□□□□ -0.77
LCA5-203ENST00000467898 ZNF473Q8WTR7 871 aaKnown RBP10.26□□□□□ -0.77
LCA5-203ENST00000467898 DDX12PQ92771 950 aa10.26□□□□□ -0.77
LCA5-203ENST00000467898 HAUS2Q9NVX0 235 aa10.26□□□□□ -0.77
LCA5-203ENST00000467898 RABL2AQ9UBK7 228 aaPredicted RBP10.26□□□□□ -0.77
LCA5-203ENST00000467898 GLI3P10071 1580 aa10.26□□□□□ -0.77
LCA5-203ENST00000467898 P4HA2O15460 535 aa10.26□□□□□ -0.77
LCA5-203ENST00000467898 TBC1D12O60347 775 aa10.26□□□□□ -0.77
LCA5-203ENST00000467898 NAT2P11245 290 aa10.26□□□□□ -0.77
LCA5-203ENST00000467898 ARPC4P59998 168 aa10.26□□□□□ -0.77
LCA5-203ENST00000467898 SULT2A1Q06520 285 aa10.26□□□□□ -0.77
LCA5-203ENST00000467898 KIF5AQ12840 1032 aa10.26□□□□□ -0.77
LCA5-203ENST00000467898 MSL1Q68DK7 614 aa10.26□□□□□ -0.77
LCA5-203ENST00000467898 ANKK1Q8NFD2 765 aa10.26□□□□□ -0.77
LCA5-203ENST00000467898 SYTL4Q96C24 671 aaPredicted RBP10.26□□□□□ -0.77
LCA5-203ENST00000467898 WDR24Q96S15 920 aa10.26□□□□□ -0.77
LCA5-203ENST00000467898 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.26□□□□□ -0.77
LCA5-203ENST00000467898 BTBD11A6QL63 1104 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 N4BP3O15049 544 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 BIRC5O15392 142 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 FAM107AO95990 144 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 HOXD10P28358 340 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 COPB2P35606 906 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 GGCXP38435 758 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 CCT6AP40227 531 aaKnown RBP10.25□□□□□ -0.77
LCA5-203ENST00000467898 CCT8P50990 548 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 BRINP3Q76B58 766 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 SLC15A3Q8IY34 581 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 C16orf71Q8IYS4 520 aaPredicted RBP10.25□□□□□ -0.77
LCA5-203ENST00000467898 CTNNBL1Q8WYA6 563 aaPredicted RBP10.25□□□□□ -0.77
LCA5-203ENST00000467898 RUBCNQ92622 972 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 HELLSQ9NRZ9 838 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 NLRP2Q9NX02 1062 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 MAGEC2Q9UBF1 373 aaPredicted RBP10.25□□□□□ -0.77
LCA5-203ENST00000467898 CTAGE15A4D2H0 777 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 CFAP73A6NFT4 308 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 KDM1AO60341 852 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 GSTA2P09210 222 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 CTAGE8P0CG41 777 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 CCND1P24385 295 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 HDLBPQ00341 1268 aaKnown RBP10.25□□□□□ -0.77
LCA5-203ENST00000467898 PDE4BQ07343 736 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 SPECC1Q5M775 1068 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 CTAGE6Q86UF2 777 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 ERICH1Q86X53 443 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 CTAGE4Q8IX94 777 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms