RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 PNMA6FA0A0J9YX94 578 aa14.99□□□□□ -0.01
COL4A1-202ENST00000467182 BTBD18B2RXH4 712 aa14.99□□□□□ -0.01
COL4A1-202ENST00000467182 PPP1R12BO60237 982 aaPredicted RBP14.99□□□□□ -0.01
COL4A1-202ENST00000467182 PLA2G6O60733 806 aa14.99□□□□□ -0.01
COL4A1-202ENST00000467182 XBP1P17861 261 aa14.99□□□□□ -0.01
COL4A1-202ENST00000467182 BACE1P56817 501 aa14.99□□□□□ -0.01
COL4A1-202ENST00000467182 FMR1Q06787 632 aaKnown RBP eCLIP14.99□□□□□ -0.01
COL4A1-202ENST00000467182 SPP2Q13103 211 aa14.99□□□□□ -0.01
COL4A1-202ENST00000467182 BRAPQ7Z569 592 aa14.99□□□□□ -0.01
COL4A1-202ENST00000467182 LDHDQ86WU2 507 aa14.99□□□□□ -0.01
COL4A1-202ENST00000467182 HOMER1Q86YM7 354 aa14.99□□□□□ -0.01
COL4A1-202ENST00000467182 FAM177A1Q8N128 213 aaPredicted RBP14.99□□□□□ -0.01
COL4A1-202ENST00000467182 TMEM87AQ8NBN3 555 aa14.99□□□□□ -0.01
COL4A1-202ENST00000467182 ZNF280CQ8ND82 737 aa14.99□□□□□ -0.01
COL4A1-202ENST00000467182 C12orf42Q96LP6 360 aa14.99□□□□□ -0.01
COL4A1-202ENST00000467182 FOXP1Q9H334 677 aaPredicted RBP14.99□□□□□ -0.01
COL4A1-202ENST00000467182 AS3MTQ9HBK9 375 aa14.99□□□□□ -0.01
COL4A1-202ENST00000467182 PICK1Q9NRD5 415 aa14.99□□□□□ -0.01
COL4A1-202ENST00000467182 CLEC11AQ9Y240 323 aa14.99□□□□□ -0.01
COL4A1-202ENST00000467182 AFG3L2Q9Y4W6 797 aa14.99□□□□□ -0.01
COL4A1-202ENST00000467182 LOC285556D6RIA3 1793 aa14.98□□□□□ -0.01
COL4A1-202ENST00000467182 DCAF8L1A6NGE4 600 aa14.98□□□□□ -0.01
COL4A1-202ENST00000467182 hCG_1984214I3L0E3 225 aa14.98□□□□□ -0.01
COL4A1-202ENST00000467182 M0R2N6 131 aa14.98□□□□□ -0.01
COL4A1-202ENST00000467182 TRAF5O00463 557 aa14.98□□□□□ -0.01
COL4A1-202ENST00000467182 ZBTB5O15062 677 aa14.98□□□□□ -0.01
COL4A1-202ENST00000467182 NF2P35240 595 aa14.98□□□□□ -0.01
COL4A1-202ENST00000467182 IREB2P48200 963 aaKnown RBP14.98□□□□□ -0.01
COL4A1-202ENST00000467182 NR5A1Q13285 461 aa14.98□□□□□ -0.01
COL4A1-202ENST00000467182 MTMR2Q13614 643 aa14.98□□□□□ -0.01
COL4A1-202ENST00000467182 QRICH1Q2TAL8 776 aa14.98□□□□□ -0.01
COL4A1-202ENST00000467182 SYDE2Q5VT97 1194 aa14.98□□□□□ -0.01
COL4A1-202ENST00000467182 MYSM1Q5VVJ2 828 aa14.98□□□□□ -0.01
COL4A1-202ENST00000467182 HEATR3Q7Z4Q2 680 aa14.98□□□□□ -0.01
COL4A1-202ENST00000467182 ZNF713Q8N859 430 aaPredicted RBP14.98□□□□□ -0.01
COL4A1-202ENST00000467182 DAGLBQ8NCG7 672 aa14.98□□□□□ -0.01
COL4A1-202ENST00000467182 LPAR1Q92633 364 aa14.98□□□□□ -0.01
COL4A1-202ENST00000467182 FEZ1Q99689 392 aa14.98□□□□□ -0.01
COL4A1-202ENST00000467182 LMBRD1Q9NUN5 540 aa14.98□□□□□ -0.01
COL4A1-202ENST00000467182 PRR12Q9ULL5 1215 aa14.98□□□□□ -0.01
COL4A1-202ENST00000467182 ZHX2Q9Y6X8 837 aa14.98□□□□□ -0.01
COL4A1-202ENST00000467182 DDX11L8A8MPP1 907 aa14.97□□□□□ -0.01
COL4A1-202ENST00000467182 WDR46O15213 610 aaKnown RBP14.97□□□□□ -0.01
COL4A1-202ENST00000467182 KRT2P35908 639 aa14.97□□□□□ -0.01
COL4A1-202ENST00000467182 STAT2P52630 851 aa14.97□□□□□ -0.01
COL4A1-202ENST00000467182 CDC37Q16543 378 aaPredicted RBP14.97□□□□□ -0.01
COL4A1-202ENST00000467182 NOM1Q5C9Z4 860 aaKnown RBP14.97□□□□□ -0.01
COL4A1-202ENST00000467182 EARS2Q5JPH6 523 aaKnown RBP14.97□□□□□ -0.01
COL4A1-202ENST00000467182 LDLRAD1Q5T700 205 aa14.97□□□□□ -0.01
COL4A1-202ENST00000467182 NOSTRINQ8IVI9 506 aa14.97□□□□□ -0.01
COL4A1-202ENST00000467182 CNKSR2Q8WXI2 1034 aa14.97□□□□□ -0.01
COL4A1-202ENST00000467182 COA7Q96BR5 231 aa14.97□□□□□ -0.01
COL4A1-202ENST00000467182 CLMNQ96JQ2 1002 aa14.97□□□□□ -0.01
COL4A1-202ENST00000467182 ZMYND12Q9H0C1 365 aa14.97□□□□□ -0.01
COL4A1-202ENST00000467182 GDPD2Q9HCC8 539 aa14.97□□□□□ -0.01
COL4A1-202ENST00000467182 SEC63Q9UGP8 760 aaKnown RBP14.97□□□□□ -0.01
COL4A1-202ENST00000467182 ESYT2A0FGR8 921 aa14.96□□□□□ -0.01
COL4A1-202ENST00000467182 FAM205CA6NFA0 338 aa14.96□□□□□ -0.01
COL4A1-202ENST00000467182 VCAM1P19320 739 aa14.96□□□□□ -0.01
COL4A1-202ENST00000467182 USP14P54578 494 aa14.96□□□□□ -0.01
COL4A1-202ENST00000467182 NLRP5P59047 1200 aa14.96□□□□□ -0.01
COL4A1-202ENST00000467182 SNAP25P60880 206 aa14.96□□□□□ -0.01
COL4A1-202ENST00000467182 KRT85P78386 507 aa14.96□□□□□ -0.01
COL4A1-202ENST00000467182 SAFBQ15424 915 aaKnown RBP eCLIP14.96□□□□□ -0.01
COL4A1-202ENST00000467182 SH3D19Q5HYK7 790 aa14.96□□□□□ -0.01
COL4A1-202ENST00000467182 ATL3Q6DD88 541 aa14.96□□□□□ -0.01
COL4A1-202ENST00000467182 FAM160B2Q86V87 743 aa14.96□□□□□ -0.01
COL4A1-202ENST00000467182 ANKRD13AQ8IZ07 590 aa14.96□□□□□ -0.01
COL4A1-202ENST00000467182 CCDC148Q8NFR7 591 aa14.96□□□□□ -0.01
COL4A1-202ENST00000467182 USP28Q96RU2 1077 aa14.96□□□□□ -0.01
COL4A1-202ENST00000467182 FTOQ9C0B1 505 aaKnown RBP eCLIP14.96□□□□□ -0.01
COL4A1-202ENST00000467182 RANBP17Q9H2T7 1088 aaKnown RBP14.96□□□□□ -0.01
COL4A1-202ENST00000467182 TFIP11Q9UBB9 837 aaKnown RBP14.96□□□□□ -0.01
COL4A1-202ENST00000467182 FEM1BQ9UK73 627 aa14.96□□□□□ -0.01
COL4A1-202ENST00000467182 ISY1Q9ULR0 285 aaKnown RBP14.96□□□□□ -0.01
COL4A1-202ENST00000467182 PCDHA4Q9UN74 947 aa14.96□□□□□ -0.01
COL4A1-202ENST00000467182 TRIM75PA6NK02 468 aa14.95□□□□□ -0.02
COL4A1-202ENST00000467182 C19orf81C9J6K1 198 aa14.95□□□□□ -0.02
COL4A1-202ENST00000467182 FIBPO43427 364 aa14.95□□□□□ -0.02
COL4A1-202ENST00000467182 PRPF40AO75400 957 aaKnown RBP14.95□□□□□ -0.02
COL4A1-202ENST00000467182 CALML3P27482 149 aa14.95□□□□□ -0.02
COL4A1-202ENST00000467182 TOB1P50616 345 aaPredicted RBP14.95□□□□□ -0.02
COL4A1-202ENST00000467182 NAPAP54920 295 aa14.95□□□□□ -0.02
COL4A1-202ENST00000467182 PPP1R18Q6NYC8 613 aa14.95□□□□□ -0.02
COL4A1-202ENST00000467182 BLIDQ8IZY5 108 aa14.95□□□□□ -0.02
COL4A1-202ENST00000467182 CHURC1Q8WUH1 139 aa14.95□□□□□ -0.02
COL4A1-202ENST00000467182 ZNF396Q96N95 335 aaPredicted RBP14.95□□□□□ -0.02
COL4A1-202ENST00000467182 ELP3Q9H9T3 547 aa14.95□□□□□ -0.02
COL4A1-202ENST00000467182 FBXO28Q9NVF7 368 aa14.95□□□□□ -0.02
COL4A1-202ENST00000467182 CSADQ9Y600 493 aa14.95□□□□□ -0.02
COL4A1-202ENST00000467182 SPDYE5A6NIY4 337 aa14.94□□□□□ -0.02
COL4A1-202ENST00000467182 ITGBL1O95965 494 aaPredicted RBP14.94□□□□□ -0.02
COL4A1-202ENST00000467182 NCLP19338 710 aaKnown RBP14.94□□□□□ -0.02
COL4A1-202ENST00000467182 HMGCS2P54868 508 aa14.94□□□□□ -0.02
COL4A1-202ENST00000467182 PPATQ06203 517 aa14.94□□□□□ -0.02
COL4A1-202ENST00000467182 GALNT17Q6IS24 598 aa14.94□□□□□ -0.02
COL4A1-202ENST00000467182 ARMC9Q7Z3E5 817 aa14.94□□□□□ -0.02
COL4A1-202ENST00000467182 ZNF526Q8TF50 670 aaPredicted RBP14.94□□□□□ -0.02
COL4A1-202ENST00000467182 LEO1Q8WVC0 666 aaPredicted RBP14.94□□□□□ -0.02
COL4A1-202ENST00000467182 RTEL1Q9NZ71 1219 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms