RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 ZNF165P49910 485 aa7.68□□□□□ -1.18
PRPF40A-205ENST00000467114 APOBRQ0VD83 1088 aa7.68□□□□□ -1.18
PRPF40A-205ENST00000467114 SLC14A2Q15849 920 aa7.68□□□□□ -1.18
PRPF40A-205ENST00000467114 ADGRF1Q5T601 910 aa7.68□□□□□ -1.18
PRPF40A-205ENST00000467114 GK5Q6ZS86 529 aa7.68□□□□□ -1.18
PRPF40A-205ENST00000467114 SLITRK4Q8IW52 837 aa7.68□□□□□ -1.18
PRPF40A-205ENST00000467114 SIRT2Q8IXJ6 389 aa7.68□□□□□ -1.18
PRPF40A-205ENST00000467114 SGPP1Q9BX95 441 aa7.68□□□□□ -1.18
PRPF40A-205ENST00000467114 NT5C1AQ9BXI3 368 aa7.68□□□□□ -1.18
PRPF40A-205ENST00000467114 FKTNO75072 461 aa7.67□□□□□ -1.18
PRPF40A-205ENST00000467114 PNLIPP16233 465 aa7.67□□□□□ -1.18
PRPF40A-205ENST00000467114 ZPBP2Q6X784 338 aa7.67□□□□□ -1.18
PRPF40A-205ENST00000467114 TMEM192Q8IY95 271 aa7.67□□□□□ -1.18
PRPF40A-205ENST00000467114 ZNF428Q96B54 188 aa7.67□□□□□ -1.18
PRPF40A-205ENST00000467114 ZNF512BQ96KM6 892 aaPredicted RBP7.67□□□□□ -1.18
PRPF40A-205ENST00000467114 FCRL2Q96LA5 508 aaPredicted RBP7.67□□□□□ -1.18
PRPF40A-205ENST00000467114 ANTXR1Q9H6X2 564 aa7.67□□□□□ -1.18
PRPF40A-205ENST00000467114 TNFRSF10DQ9UBN6 386 aa7.67□□□□□ -1.18
PRPF40A-205ENST00000467114 CNOT6Q9ULM6 557 aaKnown RBP7.67□□□□□ -1.18
PRPF40A-205ENST00000467114 FADS2P1A8MWK0 482 aa7.66□□□□□ -1.18
PRPF40A-205ENST00000467114 RTP1P59025 263 aa7.66□□□□□ -1.18
PRPF40A-205ENST00000467114 CHST7Q9NS84 486 aa7.66□□□□□ -1.18
PRPF40A-205ENST00000467114 MBD1Q9UIS9 605 aaPredicted RBP7.66□□□□□ -1.18
PRPF40A-205ENST00000467114 MINPP1Q9UNW1 487 aa7.66□□□□□ -1.18
PRPF40A-205ENST00000467114 KCTD3Q9Y597 815 aa7.66□□□□□ -1.18
PRPF40A-205ENST00000467114 ENDOUP21128 410 aaKnown RBP7.65□□□□□ -1.18
PRPF40A-205ENST00000467114 MCM4P33991 863 aa7.65□□□□□ -1.18
PRPF40A-205ENST00000467114 YBX1P67809 324 aaKnown RBP7.65□□□□□ -1.18
PRPF40A-205ENST00000467114 SRSF3P84103 164 aaKnown RBP7.65□□□□□ -1.18
PRPF40A-205ENST00000467114 ZNF385BQ569K4 471 aa7.65□□□□□ -1.18
PRPF40A-205ENST00000467114 NKD1Q969G9 470 aa7.65□□□□□ -1.18
PRPF40A-205ENST00000467114 SLC6A18Q96N87 628 aa7.65□□□□□ -1.18
PRPF40A-205ENST00000467114 PLCD4Q9BRC7 762 aa7.65□□□□□ -1.18
PRPF40A-205ENST00000467114 KRTAP4-2Q9BYR5 136 aa7.65□□□□□ -1.18
PRPF40A-205ENST00000467114 PRR13Q9NZ81 148 aa7.65□□□□□ -1.18
PRPF40A-205ENST00000467114 RECKO95980 971 aa7.64□□□□□ -1.19
PRPF40A-205ENST00000467114 BMP8BP34820 402 aa7.64□□□□□ -1.19
PRPF40A-205ENST00000467114 CTSKP43235 329 aa7.64□□□□□ -1.19
PRPF40A-205ENST00000467114 EAF1Q96JC9 268 aaPredicted RBP7.64□□□□□ -1.19
PRPF40A-205ENST00000467114 SLC9A7Q96T83 725 aa7.64□□□□□ -1.19
PRPF40A-205ENST00000467114 MKRN2Q9H000 416 aaKnown RBP7.64□□□□□ -1.19
PRPF40A-205ENST00000467114 BCL11AQ9H165 835 aa7.64□□□□□ -1.19
PRPF40A-205ENST00000467114 PCDHB12Q9Y5F1 795 aa7.64□□□□□ -1.19
PRPF40A-205ENST00000467114 NCANO14594 1321 aa7.63□□□□□ -1.19
PRPF40A-205ENST00000467114 RFXAPO00287 272 aa7.63□□□□□ -1.19
PRPF40A-205ENST00000467114 PRRG2O14669 202 aa7.63□□□□□ -1.19
PRPF40A-205ENST00000467114 ZNF205O95201 554 aa7.63□□□□□ -1.19
PRPF40A-205ENST00000467114 ERVFRD-1P60508 538 aa7.63□□□□□ -1.19
PRPF40A-205ENST00000467114 AUHQ13825 339 aaKnown RBP7.63□□□□□ -1.19
PRPF40A-205ENST00000467114 SSPNQ14714 243 aa7.63□□□□□ -1.19
PRPF40A-205ENST00000467114 HSF5Q4G112 596 aaPredicted RBP7.63□□□□□ -1.19
PRPF40A-205ENST00000467114 TCERG1LQ5VWI1 586 aa7.63□□□□□ -1.19
PRPF40A-205ENST00000467114 INTS3Q68E01 1043 aaKnown RBP7.63□□□□□ -1.19
PRPF40A-205ENST00000467114 GALNT18Q6P9A2 607 aa7.63□□□□□ -1.19
PRPF40A-205ENST00000467114 PARD6AQ9NPB6 346 aa7.63□□□□□ -1.19
PRPF40A-205ENST00000467114 ERVK13-1Q9NX77 482 aa7.63□□□□□ -1.19
PRPF40A-205ENST00000467114 ADAMTS20P59510 1910 aa7.62□□□□□ -1.19
PRPF40A-205ENST00000467114 WTIPA6NIX2 430 aaPredicted RBP7.62□□□□□ -1.19
PRPF40A-205ENST00000467114 HOXA5P20719 270 aa7.62□□□□□ -1.19
PRPF40A-205ENST00000467114 VIPR1P32241 457 aa7.62□□□□□ -1.19
PRPF40A-205ENST00000467114 CEBPAP49715 358 aaPredicted RBP7.62□□□□□ -1.19
PRPF40A-205ENST00000467114 SLCO6A1Q86UG4 719 aa7.62□□□□□ -1.19
PRPF40A-205ENST00000467114 KIAA0825Q8IV33 1275 aa7.62□□□□□ -1.19
PRPF40A-205ENST00000467114 TMEM151BQ8IW70 566 aa7.62□□□□□ -1.19
PRPF40A-205ENST00000467114 SIGLEC10Q96LC7 697 aa7.62□□□□□ -1.19
PRPF40A-205ENST00000467114 C20orf173Q96LM9 149 aa7.62□□□□□ -1.19
PRPF40A-205ENST00000467114 CNTD2Q9H8S5 307 aa7.62□□□□□ -1.19
PRPF40A-205ENST00000467114 SIRT5Q9NXA8 310 aa7.62□□□□□ -1.19
PRPF40A-205ENST00000467114 GFOD1Q9NXC2 390 aa7.62□□□□□ -1.19
PRPF40A-205ENST00000467114 GPR55Q9Y2T6 319 aaPredicted RBP7.62□□□□□ -1.19
PRPF40A-205ENST00000467114 B8ZZF3 427 aa7.61□□□□□ -1.19
PRPF40A-205ENST00000467114 ABLIM1O14639 778 aa7.61□□□□□ -1.19
PRPF40A-205ENST00000467114 N4BP3O15049 544 aa7.61□□□□□ -1.19
PRPF40A-205ENST00000467114 VAV1P15498 845 aa7.61□□□□□ -1.19
PRPF40A-205ENST00000467114 SDHBP21912 280 aa7.61□□□□□ -1.19
PRPF40A-205ENST00000467114 CTSWP56202 376 aa7.61□□□□□ -1.19
PRPF40A-205ENST00000467114 MRRFQ96E11 262 aaKnown RBP7.61□□□□□ -1.19
PRPF40A-205ENST00000467114 DHRS1Q96LJ7 313 aa7.61□□□□□ -1.19
PRPF40A-205ENST00000467114 KCNC2Q96PR1 638 aa7.61□□□□□ -1.19
PRPF40A-205ENST00000467114 SPON2Q9BUD6 331 aa7.61□□□□□ -1.19
PRPF40A-205ENST00000467114 SUCOQ9UBS9 1254 aaKnown RBP7.61□□□□□ -1.19
PRPF40A-205ENST00000467114 FBXL21Q9UKT6 434 aa7.61□□□□□ -1.19
PRPF40A-205ENST00000467114 ZNRF3Q9ULT6 936 aa7.61□□□□□ -1.19
PRPF40A-205ENST00000467114 A0A1W2PQ45 241 aaPredicted RBP7.6□□□□□ -1.19
PRPF40A-205ENST00000467114 A0A1W2PQY0 241 aa7.6□□□□□ -1.19
PRPF40A-205ENST00000467114 MEIS1O00470 390 aa7.6□□□□□ -1.19
PRPF40A-205ENST00000467114 ACRP10323 421 aa7.6□□□□□ -1.19
PRPF40A-205ENST00000467114 EPHB3P54753 998 aa7.6□□□□□ -1.19
PRPF40A-205ENST00000467114 LAPTM5Q13571 262 aa7.6□□□□□ -1.19
PRPF40A-205ENST00000467114 KIR3DS1Q14943 382 aa7.6□□□□□ -1.19
PRPF40A-205ENST00000467114 OLFML2BQ68BL8 750 aa7.6□□□□□ -1.19
PRPF40A-205ENST00000467114 CDADC1Q9BWV3 514 aa7.6□□□□□ -1.19
PRPF40A-205ENST00000467114 BACH2Q9BYV9 841 aa7.6□□□□□ -1.19
PRPF40A-205ENST00000467114 IGSF5Q9NSI5 407 aa7.6□□□□□ -1.19
PRPF40A-205ENST00000467114 KLHL14Q9P2G3 628 aa7.6□□□□□ -1.19
PRPF40A-205ENST00000467114 IRAK3Q9Y616 596 aa7.6□□□□□ -1.19
PRPF40A-205ENST00000467114 TAF6LQ9Y6J9 622 aa7.6□□□□□ -1.19
PRPF40A-205ENST00000467114 IRS4O14654 1257 aaPredicted RBP7.59□□□□□ -1.19
PRPF40A-205ENST00000467114 SHOXO15266 292 aa7.59□□□□□ -1.19
PRPF40A-205ENST00000467114 MPOP05164 745 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms