RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 NUDT12Q9BQG2 462 aa7.8□□□□□ -1.16
UBXN4-205ENST00000467065 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.8□□□□□ -1.16
UBXN4-205ENST00000467065 ARHGEF10LQ9HCE6 1279 aa7.8□□□□□ -1.16
UBXN4-205ENST00000467065 EPB41L4AQ9HCS5 686 aaPredicted RBP7.8□□□□□ -1.16
UBXN4-205ENST00000467065 BTBD7Q9P203 1132 aa7.8□□□□□ -1.16
UBXN4-205ENST00000467065 RABGAP1Q9Y3P9 1069 aa7.8□□□□□ -1.16
UBXN4-205ENST00000467065 MYH6P13533 1939 aa7.8□□□□□ -1.16
UBXN4-205ENST00000467065 CCDC171Q6TFL3 1326 aa7.79□□□□□ -1.16
UBXN4-205ENST00000467065 EPB41L2O43491 1005 aaKnown RBP7.79□□□□□ -1.16
UBXN4-205ENST00000467065 RAD21O60216 631 aa7.79□□□□□ -1.16
UBXN4-205ENST00000467065 FARP2O94887 1054 aaPredicted RBP7.79□□□□□ -1.16
UBXN4-205ENST00000467065 SGPL1O95470 568 aa7.79□□□□□ -1.16
UBXN4-205ENST00000467065 RASA1P20936 1047 aa7.79□□□□□ -1.16
UBXN4-205ENST00000467065 PSMA5P28066 241 aa7.79□□□□□ -1.16
UBXN4-205ENST00000467065 MAPK4P31152 587 aa7.79□□□□□ -1.16
UBXN4-205ENST00000467065 CCL14Q16627 93 aa7.79□□□□□ -1.16
UBXN4-205ENST00000467065 ARSIQ5FYB1 569 aa7.79□□□□□ -1.16
UBXN4-205ENST00000467065 CCDC129Q6ZRS4 1044 aa7.79□□□□□ -1.16
UBXN4-205ENST00000467065 SOCS4Q8WXH5 440 aa7.79□□□□□ -1.16
UBXN4-205ENST00000467065 CCDC17Q96LX7 622 aa7.79□□□□□ -1.16
UBXN4-205ENST00000467065 ESYT1Q9BSJ8 1104 aa7.79□□□□□ -1.16
UBXN4-205ENST00000467065 CNNM2Q9H8M5 875 aa7.79□□□□□ -1.16
UBXN4-205ENST00000467065 PAK6Q9NQU5 681 aaPredicted RBP7.79□□□□□ -1.16
UBXN4-205ENST00000467065 TMX2Q9Y320 296 aa7.79□□□□□ -1.16
UBXN4-205ENST00000467065 RANBP2P49792 3224 aaKnown RBP7.79□□□□□ -1.16
UBXN4-205ENST00000467065 LCTP09848 1927 aa7.78□□□□□ -1.16
UBXN4-205ENST00000467065 WDR46O15213 610 aaKnown RBP7.78□□□□□ -1.16
UBXN4-205ENST00000467065 FLOT1O75955 427 aa7.78□□□□□ -1.16
UBXN4-205ENST00000467065 TFRCP02786 760 aaKnown RBP7.78□□□□□ -1.16
UBXN4-205ENST00000467065 HMGB1P09429 215 aaKnown RBP7.78□□□□□ -1.16
UBXN4-205ENST00000467065 PCP11498 1178 aaKnown RBP7.78□□□□□ -1.16
UBXN4-205ENST00000467065 EEF2P13639 858 aaKnown RBP7.78□□□□□ -1.16
UBXN4-205ENST00000467065 RGS2P41220 211 aa7.78□□□□□ -1.16
UBXN4-205ENST00000467065 NT5C2P49902 561 aa7.78□□□□□ -1.16
UBXN4-205ENST00000467065 CCNA1P78396 465 aa7.78□□□□□ -1.16
UBXN4-205ENST00000467065 SBK1Q52WX2 424 aa7.78□□□□□ -1.16
UBXN4-205ENST00000467065 CCDC178Q5BJE1 867 aa7.78□□□□□ -1.16
UBXN4-205ENST00000467065 MORN1Q5T089 497 aa7.78□□□□□ -1.16
UBXN4-205ENST00000467065 LBX2Q6XYB7 198 aa7.78□□□□□ -1.16
UBXN4-205ENST00000467065 SYNE3Q6ZMZ3 975 aa7.78□□□□□ -1.16
UBXN4-205ENST00000467065 MFSD6Q6ZSS7 791 aa7.78□□□□□ -1.16
UBXN4-205ENST00000467065 UBE2Q1Q7Z7E8 422 aa7.78□□□□□ -1.16
UBXN4-205ENST00000467065 IFNL3Q8IZI9 196 aa7.78□□□□□ -1.16
UBXN4-205ENST00000467065 IL27Q8NEV9 243 aa7.78□□□□□ -1.16
UBXN4-205ENST00000467065 DIS3LQ8TF46 1054 aaKnown RBP7.78□□□□□ -1.16
UBXN4-205ENST00000467065 USP6NLQ92738 828 aa7.78□□□□□ -1.16
UBXN4-205ENST00000467065 CHMP4CQ96CF2 233 aa7.78□□□□□ -1.16
UBXN4-205ENST00000467065 ATG4CQ96DT6 458 aa7.78□□□□□ -1.16
UBXN4-205ENST00000467065 FAM227BQ96M60 508 aa7.78□□□□□ -1.16
UBXN4-205ENST00000467065 APBA2Q99767 749 aa7.78□□□□□ -1.16
UBXN4-205ENST00000467065 DSCC1Q9BVC3 393 aa7.78□□□□□ -1.16
UBXN4-205ENST00000467065 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.78□□□□□ -1.16
UBXN4-205ENST00000467065 KRT23Q9C075 422 aa7.78□□□□□ -1.16
UBXN4-205ENST00000467065 SH2D4AQ9H788 454 aa7.78□□□□□ -1.16
UBXN4-205ENST00000467065 VCPKMTQ9H867 229 aa7.78□□□□□ -1.16
UBXN4-205ENST00000467065 RPTORQ8N122 1335 aa7.78□□□□□ -1.16
UBXN4-205ENST00000467065 H0YGN5 161 aa7.77□□□□□ -1.17
UBXN4-205ENST00000467065 SGSM2O43147 1006 aa7.77□□□□□ -1.17
UBXN4-205ENST00000467065 PRDM1O75626 825 aa7.77□□□□□ -1.17
UBXN4-205ENST00000467065 SLC34A2O95436 690 aa7.77□□□□□ -1.17
UBXN4-205ENST00000467065 HSPD1P10809 573 aaKnown RBP7.77□□□□□ -1.17
UBXN4-205ENST00000467065 XRCC5P13010 732 aaKnown RBP7.77□□□□□ -1.17
UBXN4-205ENST00000467065 PTPREP23469 700 aa7.77□□□□□ -1.17
UBXN4-205ENST00000467065 CCND3P30281 292 aaPredicted RBP7.77□□□□□ -1.17
UBXN4-205ENST00000467065 CACNB2Q08289 660 aaPredicted RBP7.77□□□□□ -1.17
UBXN4-205ENST00000467065 MAP2K5Q13163 448 aa7.77□□□□□ -1.17
UBXN4-205ENST00000467065 PLS1Q14651 629 aa7.77□□□□□ -1.17
UBXN4-205ENST00000467065 COG2Q14746 738 aa7.77□□□□□ -1.17
UBXN4-205ENST00000467065 FAM83BQ5T0W9 1011 aa7.77□□□□□ -1.17
UBXN4-205ENST00000467065 MAP3K21Q5TCX8 1036 aa7.77□□□□□ -1.17
UBXN4-205ENST00000467065 LPAR1Q92633 364 aa7.77□□□□□ -1.17
UBXN4-205ENST00000467065 DPF3Q92784 378 aa7.77□□□□□ -1.17
UBXN4-205ENST00000467065 NUP88Q99567 741 aaPredicted RBP7.77□□□□□ -1.17
UBXN4-205ENST00000467065 MOV10L1Q9BXT6 1211 aaKnown RBP7.77□□□□□ -1.17
UBXN4-205ENST00000467065 CRISPLD2Q9H0B8 497 aa7.77□□□□□ -1.17
UBXN4-205ENST00000467065 KANSL2Q9H9L4 492 aa7.77□□□□□ -1.17
UBXN4-205ENST00000467065 GOPCQ9HD26 462 aa7.77□□□□□ -1.17
UBXN4-205ENST00000467065 HMX1Q9NP08 348 aaPredicted RBP7.77□□□□□ -1.17
UBXN4-205ENST00000467065 FBXO28Q9NVF7 368 aa7.77□□□□□ -1.17
UBXN4-205ENST00000467065 FLRT1Q9NZU1 646 aa7.77□□□□□ -1.17
UBXN4-205ENST00000467065 IVNS1ABPQ9Y6Y0 642 aa7.77□□□□□ -1.17
UBXN4-205ENST00000467065 LRRC37A2A6NM11 1700 aa7.77□□□□□ -1.17
UBXN4-205ENST00000467065 SLC15A5A6NIM6 579 aa7.76□□□□□ -1.17
UBXN4-205ENST00000467065 FOXP2O15409 715 aa7.76□□□□□ -1.17
UBXN4-205ENST00000467065 TSPY3P0CV98 308 aa7.76□□□□□ -1.17
UBXN4-205ENST00000467065 TSPY8P0CW00 308 aa7.76□□□□□ -1.17
UBXN4-205ENST00000467065 ERCC3P19447 782 aa7.76□□□□□ -1.17
UBXN4-205ENST00000467065 PPARAQ07869 468 aa7.76□□□□□ -1.17
UBXN4-205ENST00000467065 GRB14Q14449 540 aa7.76□□□□□ -1.17
UBXN4-205ENST00000467065 ALX1Q15699 326 aa7.76□□□□□ -1.17
UBXN4-205ENST00000467065 RRP12Q5JTH9 1297 aaKnown RBP7.76□□□□□ -1.17
UBXN4-205ENST00000467065 VPS53Q5VIR6 699 aa7.76□□□□□ -1.17
UBXN4-205ENST00000467065 SKAP1Q86WV1 359 aa7.76□□□□□ -1.17
UBXN4-205ENST00000467065 IQCA1Q86XH1 822 aa7.76□□□□□ -1.17
UBXN4-205ENST00000467065 NCAPG2Q86XI2 1143 aa7.76□□□□□ -1.17
UBXN4-205ENST00000467065 LRRC47Q8N1G4 583 aaKnown RBP7.76□□□□□ -1.17
UBXN4-205ENST00000467065 NPLOC4Q8TAT6 608 aa7.76□□□□□ -1.17
UBXN4-205ENST00000467065 ESR2Q92731 530 aa7.76□□□□□ -1.17
UBXN4-205ENST00000467065 PAWRQ96IZ0 340 aaKnown RBP7.76□□□□□ -1.17
UBXN4-205ENST00000467065 UBAC1Q9BSL1 405 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms