RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 USP17L20D6RJB6 530 aa12.46□□□□□ -0.41
NUP188-204ENST00000467044 FLOT1O75955 427 aa12.46□□□□□ -0.41
NUP188-204ENST00000467044 SLC10A3P09131 477 aa12.46□□□□□ -0.41
NUP188-204ENST00000467044 CETPP11597 493 aa12.46□□□□□ -0.41
NUP188-204ENST00000467044 USP17L24Q0WX57 530 aa12.46□□□□□ -0.41
NUP188-204ENST00000467044 CCL15Q16663 113 aa12.46□□□□□ -0.41
NUP188-204ENST00000467044 DEFB115Q30KQ5 88 aa12.46□□□□□ -0.41
NUP188-204ENST00000467044 TREML2Q5T2D2 321 aa12.46□□□□□ -0.41
NUP188-204ENST00000467044 SYDE2Q5VT97 1194 aa12.46□□□□□ -0.41
NUP188-204ENST00000467044 FAM160B2Q86V87 743 aa12.46□□□□□ -0.41
NUP188-204ENST00000467044 HOMER1Q86YM7 354 aa12.46□□□□□ -0.41
NUP188-204ENST00000467044 ADGRF4Q8IZF3 695 aa12.46□□□□□ -0.41
NUP188-204ENST00000467044 FAM184AQ8NB25 1140 aa12.46□□□□□ -0.41
NUP188-204ENST00000467044 PROCA1Q8NCQ7 364 aaPredicted RBP12.46□□□□□ -0.41
NUP188-204ENST00000467044 INTS4Q96HW7 963 aaKnown RBP12.46□□□□□ -0.41
NUP188-204ENST00000467044 FBXO28Q9NVF7 368 aa12.46□□□□□ -0.41
NUP188-204ENST00000467044 ORC3Q9UBD5 711 aaPredicted RBP12.46□□□□□ -0.41
NUP188-204ENST00000467044 V9GY48 417 aaPredicted RBP12.46□□□□□ -0.41
NUP188-204ENST00000467044 MYH6P13533 1939 aa12.46□□□□□ -0.42
NUP188-204ENST00000467044 CNTNAP5Q8WYK1 1306 aa12.45□□□□□ -0.42
NUP188-204ENST00000467044 CYTH3O43739 400 aa12.45□□□□□ -0.42
NUP188-204ENST00000467044 FMNL1O95466 1100 aaPredicted RBP12.45□□□□□ -0.42
NUP188-204ENST00000467044 SMARCA1P28370 1054 aa12.45□□□□□ -0.42
NUP188-204ENST00000467044 GJB2P29033 226 aa12.45□□□□□ -0.42
NUP188-204ENST00000467044 SNAP25P60880 206 aa12.45□□□□□ -0.42
NUP188-204ENST00000467044 HMGN5P82970 282 aaKnown RBP12.45□□□□□ -0.42
NUP188-204ENST00000467044 FUT2Q10981 343 aa12.45□□□□□ -0.42
NUP188-204ENST00000467044 PABPC4Q13310 644 aaKnown RBP eCLIP12.45□□□□□ -0.42
NUP188-204ENST00000467044 CYP4F22Q6NT55 531 aa12.45□□□□□ -0.42
NUP188-204ENST00000467044 BTNL9Q6UXG8 535 aa12.45□□□□□ -0.42
NUP188-204ENST00000467044 CATSPERGQ6ZRH7 1159 aa12.45□□□□□ -0.42
NUP188-204ENST00000467044 PRPF38AQ8NAV1 312 aaKnown RBP12.45□□□□□ -0.42
NUP188-204ENST00000467044 SMARCC2Q8TAQ2 1214 aa12.45□□□□□ -0.42
NUP188-204ENST00000467044 RRP36Q96EU6 259 aaKnown RBP12.45□□□□□ -0.42
NUP188-204ENST00000467044 HHIPL1Q96JK4 782 aa12.45□□□□□ -0.42
NUP188-204ENST00000467044 MS4A4AQ96JQ5 239 aa12.45□□□□□ -0.42
NUP188-204ENST00000467044 PIGSQ96S52 555 aa12.45□□□□□ -0.42
NUP188-204ENST00000467044 SLF1Q9BQI6 1058 aa12.45□□□□□ -0.42
NUP188-204ENST00000467044 SPZ1Q9BXG8 430 aa12.45□□□□□ -0.42
NUP188-204ENST00000467044 RNF26Q9BY78 433 aaPredicted RBP12.45□□□□□ -0.42
NUP188-204ENST00000467044 RIOX1Q9H6W3 641 aa12.45□□□□□ -0.42
NUP188-204ENST00000467044 JMJD4Q9H9V9 463 aa12.45□□□□□ -0.42
NUP188-204ENST00000467044 PRR12Q9ULL5 1215 aa12.45□□□□□ -0.42
NUP188-204ENST00000467044 AGTPBP1Q9UPW5 1226 aa12.45□□□□□ -0.42
NUP188-204ENST00000467044 CTDP1Q9Y5B0 961 aaPredicted RBP12.45□□□□□ -0.42
NUP188-204ENST00000467044 MANSC4A6NHS7 340 aaPredicted RBP12.44□□□□□ -0.42
NUP188-204ENST00000467044 PRPF3O43395 683 aaKnown RBP12.44□□□□□ -0.42
NUP188-204ENST00000467044 PLA2G6O60733 806 aa12.44□□□□□ -0.42
NUP188-204ENST00000467044 OSBPP22059 807 aa12.44□□□□□ -0.42
NUP188-204ENST00000467044 FOSBP53539 338 aa12.44□□□□□ -0.42
NUP188-204ENST00000467044 IRX3P78415 501 aaPredicted RBP12.44□□□□□ -0.42
NUP188-204ENST00000467044 MOGSQ13724 837 aa12.44□□□□□ -0.42
NUP188-204ENST00000467044 COG2Q14746 738 aa12.44□□□□□ -0.42
NUP188-204ENST00000467044 SLC35G1Q2M3R5 365 aa12.44□□□□□ -0.42
NUP188-204ENST00000467044 GPAT2Q6NUI2 795 aa12.44□□□□□ -0.42
NUP188-204ENST00000467044 BRI3BPQ8WY22 251 aa12.44□□□□□ -0.42
NUP188-204ENST00000467044 SEC63Q9UGP8 760 aaKnown RBP12.44□□□□□ -0.42
NUP188-204ENST00000467044 LOC285556D6RIA3 1793 aa12.43□□□□□ -0.42
NUP188-204ENST00000467044 FAM155AB1AL88 458 aaPredicted RBP12.43□□□□□ -0.42
NUP188-204ENST00000467044 BTBD19C9JJ37 291 aa12.43□□□□□ -0.42
NUP188-204ENST00000467044 DEXIO95424 95 aa12.43□□□□□ -0.42
NUP188-204ENST00000467044 FDPSP14324 419 aaKnown RBP12.43□□□□□ -0.42
NUP188-204ENST00000467044 HOXA7P31268 230 aaPredicted RBP12.43□□□□□ -0.42
NUP188-204ENST00000467044 DSG3P32926 999 aa12.43□□□□□ -0.42
NUP188-204ENST00000467044 HTRA3P83110 453 aa12.43□□□□□ -0.42
NUP188-204ENST00000467044 CDC37Q16543 378 aaPredicted RBP12.43□□□□□ -0.42
NUP188-204ENST00000467044 CCDC174Q6PII3 467 aa12.43□□□□□ -0.42
NUP188-204ENST00000467044 WASF1Q92558 559 aa12.43□□□□□ -0.42
NUP188-204ENST00000467044 ATG4CQ96DT6 458 aa12.43□□□□□ -0.42
NUP188-204ENST00000467044 CAPNS2Q96L46 248 aa12.43□□□□□ -0.42
NUP188-204ENST00000467044 HOXC10Q9NYD6 342 aa12.43□□□□□ -0.42
NUP188-204ENST00000467044 RBM27Q9P2N5 1060 aaKnown RBP12.43□□□□□ -0.42
NUP188-204ENST00000467044 PPP1R9AQ9ULJ8 1098 aa12.43□□□□□ -0.42
NUP188-204ENST00000467044 KIF3AQ9Y496 699 aa12.43□□□□□ -0.42
NUP188-204ENST00000467044 STK36Q9NRP7 1315 aa12.42□□□□□ -0.42
NUP188-204ENST00000467044 PNMA6FA0A0J9YX94 578 aa12.42□□□□□ -0.42
NUP188-204ENST00000467044 RASSF10A6NK89 507 aa12.42□□□□□ -0.42
NUP188-204ENST00000467044 PDHXO00330 501 aa12.42□□□□□ -0.42
NUP188-204ENST00000467044 ZBTB5O15062 677 aa12.42□□□□□ -0.42
NUP188-204ENST00000467044 ZBED4O75132 1171 aa12.42□□□□□ -0.42
NUP188-204ENST00000467044 KIF23Q02241 960 aaPredicted RBP12.42□□□□□ -0.42
NUP188-204ENST00000467044 QRICH1Q2TAL8 776 aa12.42□□□□□ -0.42
NUP188-204ENST00000467044 ANKRD23Q86SG2 305 aa12.42□□□□□ -0.42
NUP188-204ENST00000467044 AIFM3Q96NN9 605 aa12.42□□□□□ -0.42
NUP188-204ENST00000467044 P2RX7Q99572 595 aaKnown RBP12.42□□□□□ -0.42
NUP188-204ENST00000467044 ALG1Q9BT22 464 aa12.42□□□□□ -0.42
NUP188-204ENST00000467044 ASCC2Q9H1I8 757 aaPredicted RBP12.42□□□□□ -0.42
NUP188-204ENST00000467044 CWC22Q9HCG8 908 aaKnown RBP12.42□□□□□ -0.42
NUP188-204ENST00000467044 PNMA3Q9UL41 463 aa12.42□□□□□ -0.42
NUP188-204ENST00000467044 TESPA1A2RU30 521 aaPredicted RBP12.41□□□□□ -0.42
NUP188-204ENST00000467044 AOC2O75106 756 aa12.41□□□□□ -0.42
NUP188-204ENST00000467044 SCG2P13521 617 aa12.41□□□□□ -0.42
NUP188-204ENST00000467044 INHBEP58166 350 aa12.41□□□□□ -0.42
NUP188-204ENST00000467044 SREBF2Q12772 1141 aa12.41□□□□□ -0.42
NUP188-204ENST00000467044 PKN1Q16512 942 aa12.41□□□□□ -0.42
NUP188-204ENST00000467044 PFKFB3Q16875 520 aaPredicted RBP12.41□□□□□ -0.42
NUP188-204ENST00000467044 LARP1BQ659C4 914 aaKnown RBP12.41□□□□□ -0.42
NUP188-204ENST00000467044 HEATR3Q7Z4Q2 680 aa12.41□□□□□ -0.42
NUP188-204ENST00000467044 FBXO11Q86XK2 927 aa12.41□□□□□ -0.42
NUP188-204ENST00000467044 CPXCR1Q8N123 301 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms