RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 GOLGA8HP0CJ92 632 aa15.42■□□□□ 0.06
PDCD11-202ENST00000466959 ADD1P35611 737 aaKnown RBP15.42■□□□□ 0.06
PDCD11-202ENST00000466959 KIF23Q02241 960 aaPredicted RBP15.42■□□□□ 0.06
PDCD11-202ENST00000466959 CUL4AQ13619 759 aa15.42■□□□□ 0.06
PDCD11-202ENST00000466959 CCDC83Q8IWF9 413 aa15.42■□□□□ 0.06
PDCD11-202ENST00000466959 ZIC5Q96T25 663 aa15.42■□□□□ 0.06
PDCD11-202ENST00000466959 GPCPD1Q9NPB8 672 aa15.42■□□□□ 0.06
PDCD11-202ENST00000466959 AGTPBP1Q9UPW5 1226 aa15.42■□□□□ 0.06
PDCD11-202ENST00000466959 CCL15-CCL14A0A0B4J2E2 113 aa15.41■□□□□ 0.06
PDCD11-202ENST00000466959 MANSC4A6NHS7 340 aaPredicted RBP15.41■□□□□ 0.06
PDCD11-202ENST00000466959 USP17L15C9J2P7 530 aa15.41■□□□□ 0.06
PDCD11-202ENST00000466959 USP17L13C9JLJ4 530 aa15.41■□□□□ 0.06
PDCD11-202ENST00000466959 TMEM232C9JQI7 657 aa15.41■□□□□ 0.06
PDCD11-202ENST00000466959 USP17L11C9JVI0 530 aa15.41■□□□□ 0.06
PDCD11-202ENST00000466959 USP17L18D6R9N7 530 aa15.41■□□□□ 0.06
PDCD11-202ENST00000466959 USP17L22D6RA61 530 aa15.41■□□□□ 0.06
PDCD11-202ENST00000466959 USP17L17D6RBQ6 530 aa15.41■□□□□ 0.06
PDCD11-202ENST00000466959 USP17L19D6RCP7 530 aa15.41■□□□□ 0.06
PDCD11-202ENST00000466959 USP17L20D6RJB6 530 aa15.41■□□□□ 0.06
PDCD11-202ENST00000466959 PLEKHA8P1O95397 391 aa15.41■□□□□ 0.06
PDCD11-202ENST00000466959 USP17L24Q0WX57 530 aa15.41■□□□□ 0.06
PDCD11-202ENST00000466959 CCL15Q16663 113 aa15.41■□□□□ 0.06
PDCD11-202ENST00000466959 TREML2Q5T2D2 321 aa15.41■□□□□ 0.06
PDCD11-202ENST00000466959 TTBK2Q6IQ55 1244 aa15.41■□□□□ 0.06
PDCD11-202ENST00000466959 CPLX2Q6PUV4 134 aaKnown RBP15.41■□□□□ 0.06
PDCD11-202ENST00000466959 BTNL9Q6UXG8 535 aa15.41■□□□□ 0.06
PDCD11-202ENST00000466959 FAM160B2Q86V87 743 aa15.41■□□□□ 0.06
PDCD11-202ENST00000466959 CHURC1Q8WUH1 139 aa15.41■□□□□ 0.06
PDCD11-202ENST00000466959 BRI3BPQ8WY22 251 aa15.41■□□□□ 0.06
PDCD11-202ENST00000466959 SPZ1Q9BXG8 430 aa15.41■□□□□ 0.06
PDCD11-202ENST00000466959 TANGO6Q9C0B7 1094 aa15.41■□□□□ 0.06
PDCD11-202ENST00000466959 RNF186Q9NXI6 227 aa15.41■□□□□ 0.06
PDCD11-202ENST00000466959 FEM1BQ9UK73 627 aa15.41■□□□□ 0.06
PDCD11-202ENST00000466959 TESPA1A2RU30 521 aaPredicted RBP15.4■□□□□ 0.06
PDCD11-202ENST00000466959 CPLX1O14810 134 aa15.4■□□□□ 0.06
PDCD11-202ENST00000466959 CDKL5O76039 1030 aa15.4■□□□□ 0.06
PDCD11-202ENST00000466959 IFNAR1P17181 557 aa15.4■□□□□ 0.06
PDCD11-202ENST00000466959 SMARCA1P28370 1054 aa15.4■□□□□ 0.06
PDCD11-202ENST00000466959 HOXA7P31268 230 aaPredicted RBP15.4■□□□□ 0.06
PDCD11-202ENST00000466959 STAT2P52630 851 aa15.4■□□□□ 0.06
PDCD11-202ENST00000466959 FUT2Q10981 343 aa15.4■□□□□ 0.06
PDCD11-202ENST00000466959 IKQ13123 557 aaPredicted RBP15.4■□□□□ 0.06
PDCD11-202ENST00000466959 PABPC4Q13310 644 aaKnown RBP eCLIP15.4■□□□□ 0.06
PDCD11-202ENST00000466959 NTRK3Q16288 839 aa15.4■□□□□ 0.06
PDCD11-202ENST00000466959 GPAT2Q6NUI2 795 aa15.4■□□□□ 0.06
PDCD11-202ENST00000466959 CATSPERGQ6ZRH7 1159 aa15.4■□□□□ 0.06
PDCD11-202ENST00000466959 REM2Q8IYK8 340 aaPredicted RBP15.4■□□□□ 0.06
PDCD11-202ENST00000466959 SRBD1Q8N5C6 995 aaKnown RBP15.4■□□□□ 0.06
PDCD11-202ENST00000466959 CNTNAP5Q8WYK1 1306 aa15.4■□□□□ 0.06
PDCD11-202ENST00000466959 A0A0G2JMZ2 1700 aa15.4■□□□□ 0.06
PDCD11-202ENST00000466959 CTDNEP1O95476 244 aa15.39■□□□□ 0.05
PDCD11-202ENST00000466959 SLC16A2P36021 539 aa15.39■□□□□ 0.05
PDCD11-202ENST00000466959 PKN2Q16513 984 aaKnown RBP15.39■□□□□ 0.05
PDCD11-202ENST00000466959 SLC35G1Q2M3R5 365 aa15.39■□□□□ 0.05
PDCD11-202ENST00000466959 SYDE2Q5VT97 1194 aa15.39■□□□□ 0.05
PDCD11-202ENST00000466959 ANKRD23Q86SG2 305 aa15.39■□□□□ 0.05
PDCD11-202ENST00000466959 NBPF11Q86T75 865 aa15.39■□□□□ 0.05
PDCD11-202ENST00000466959 SLF1Q9BQI6 1058 aa15.39■□□□□ 0.05
PDCD11-202ENST00000466959 LLPHQ9BRT6 129 aaKnown RBP15.39■□□□□ 0.05
PDCD11-202ENST00000466959 UBA5Q9GZZ9 404 aa15.39■□□□□ 0.05
PDCD11-202ENST00000466959 RIOX1Q9H6W3 641 aa15.39■□□□□ 0.05
PDCD11-202ENST00000466959 FBXO28Q9NVF7 368 aa15.39■□□□□ 0.05
PDCD11-202ENST00000466959 SLC45A1Q9Y2W3 748 aa15.39■□□□□ 0.05
PDCD11-202ENST00000466959 BAZ2BQ9UIF8 2168 aaKnown RBP15.39■□□□□ 0.05
PDCD11-202ENST00000466959 MYPNQ86TC9 1320 aa15.39■□□□□ 0.05
PDCD11-202ENST00000466959 COL11A1P12107 1806 aaPredicted RBP15.38■□□□□ 0.05
PDCD11-202ENST00000466959 BTBD19C9JJ37 291 aa15.38■□□□□ 0.05
PDCD11-202ENST00000466959 CYTH3O43739 400 aa15.38■□□□□ 0.05
PDCD11-202ENST00000466959 FLOT1O75955 427 aa15.38■□□□□ 0.05
PDCD11-202ENST00000466959 INHBEP58166 350 aa15.38■□□□□ 0.05
PDCD11-202ENST00000466959 SREBF2Q12772 1141 aa15.38■□□□□ 0.05
PDCD11-202ENST00000466959 ADGRF4Q8IZF3 695 aa15.38■□□□□ 0.05
PDCD11-202ENST00000466959 CMTR1Q8N1G2 835 aaKnown RBP15.38■□□□□ 0.05
PDCD11-202ENST00000466959 NSUN7Q8NE18 718 aaKnown RBP15.38■□□□□ 0.05
PDCD11-202ENST00000466959 CPVLQ9H3G5 476 aa15.38■□□□□ 0.05
PDCD11-202ENST00000466959 PPP1R9AQ9ULJ8 1098 aa15.38■□□□□ 0.05
PDCD11-202ENST00000466959 PRR12Q9ULL5 1215 aa15.38■□□□□ 0.05
PDCD11-202ENST00000466959 PTPDC1A2A3K4 754 aa15.37■□□□□ 0.05
PDCD11-202ENST00000466959 FMNL1O95466 1100 aaPredicted RBP15.37■□□□□ 0.05
PDCD11-202ENST00000466959 OSBPP22059 807 aa15.37■□□□□ 0.05
PDCD11-202ENST00000466959 IRX3P78415 501 aaPredicted RBP15.37■□□□□ 0.05
PDCD11-202ENST00000466959 SSRP1Q08945 709 aaKnown RBP15.37■□□□□ 0.05
PDCD11-202ENST00000466959 COG2Q14746 738 aa15.37■□□□□ 0.05
PDCD11-202ENST00000466959 CCDC82Q8N4S0 544 aa15.37■□□□□ 0.05
PDCD11-202ENST00000466959 PRPF38AQ8NAV1 312 aaKnown RBP15.37■□□□□ 0.05
PDCD11-202ENST00000466959 SMARCC2Q8TAQ2 1214 aa15.37■□□□□ 0.05
PDCD11-202ENST00000466959 PHKBQ93100 1093 aa15.37■□□□□ 0.05
PDCD11-202ENST00000466959 KIFC2Q96AC6 838 aa15.37■□□□□ 0.05
PDCD11-202ENST00000466959 INTS4Q96HW7 963 aaKnown RBP15.37■□□□□ 0.05
PDCD11-202ENST00000466959 RNF26Q9BY78 433 aaPredicted RBP15.37■□□□□ 0.05
PDCD11-202ENST00000466959 JMJD4Q9H9V9 463 aa15.37■□□□□ 0.05
PDCD11-202ENST00000466959 ZCCHC17Q9NP64 241 aaKnown RBP15.37■□□□□ 0.05
PDCD11-202ENST00000466959 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.37■□□□□ 0.05
PDCD11-202ENST00000466959 STK36Q9NRP7 1315 aa15.37■□□□□ 0.05
PDCD11-202ENST00000466959 PDHXO00330 501 aa15.36■□□□□ 0.05
PDCD11-202ENST00000466959 PRPF3O43395 683 aaKnown RBP15.36■□□□□ 0.05
PDCD11-202ENST00000466959 FDX1P10109 184 aa15.36■□□□□ 0.05
PDCD11-202ENST00000466959 DSG3P32926 999 aa15.36■□□□□ 0.05
PDCD11-202ENST00000466959 HMGN5P82970 282 aaKnown RBP15.36■□□□□ 0.05
PDCD11-202ENST00000466959 TRIM22Q8IYM9 498 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms