RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 BMP8BP34820 402 aa6.38□□□□□ -1.39
VPS13D-203ENST00000466732 ZNF445P59923 1031 aa6.38□□□□□ -1.39
VPS13D-203ENST00000466732 SLC7A5Q01650 507 aa6.38□□□□□ -1.39
VPS13D-203ENST00000466732 CRTC3Q6UUV7 619 aa6.38□□□□□ -1.39
VPS13D-203ENST00000466732 ZPBP2Q6X784 338 aa6.38□□□□□ -1.39
VPS13D-203ENST00000466732 BRF1Q92994 677 aa6.38□□□□□ -1.39
VPS13D-203ENST00000466732 LIN37Q96GY3 246 aaPredicted RBP6.38□□□□□ -1.39
VPS13D-203ENST00000466732 C19orf44Q9H6X5 657 aa6.38□□□□□ -1.39
VPS13D-203ENST00000466732 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.38□□□□□ -1.39
VPS13D-203ENST00000466732 ZMYM5Q9UJ78 669 aa6.38□□□□□ -1.39
VPS13D-203ENST00000466732 ZNF205O95201 554 aa6.37□□□□□ -1.39
VPS13D-203ENST00000466732 SSBP05455 408 aaKnown RBP eCLIP6.37□□□□□ -1.39
VPS13D-203ENST00000466732 GSNP06396 782 aa6.37□□□□□ -1.39
VPS13D-203ENST00000466732 VAV1P15498 845 aa6.37□□□□□ -1.39
VPS13D-203ENST00000466732 TCEAL1Q15170 157 aa6.37□□□□□ -1.39
VPS13D-203ENST00000466732 NR0B2Q15466 257 aa6.37□□□□□ -1.39
VPS13D-203ENST00000466732 TIGD5Q53EQ6 642 aa6.37□□□□□ -1.39
VPS13D-203ENST00000466732 NOL9Q5SY16 702 aaKnown RBP6.37□□□□□ -1.39
VPS13D-203ENST00000466732 SPPL2CQ8IUH8 684 aa6.37□□□□□ -1.39
VPS13D-203ENST00000466732 LILRA2Q8N149 483 aa6.37□□□□□ -1.39
VPS13D-203ENST00000466732 ANKS4BQ8N8V4 417 aa6.37□□□□□ -1.39
VPS13D-203ENST00000466732 KLHL6Q8WZ60 621 aa6.37□□□□□ -1.39
VPS13D-203ENST00000466732 HAUS7Q99871 368 aa6.37□□□□□ -1.39
VPS13D-203ENST00000466732 FHOD1Q9Y613 1164 aa6.37□□□□□ -1.39
VPS13D-203ENST00000466732 MRVI1Q9Y6F6 885 aa6.37□□□□□ -1.39
VPS13D-203ENST00000466732 H0Y8X5 98 aa6.36□□□□□ -1.39
VPS13D-203ENST00000466732 ITGA4P13612 1032 aa6.36□□□□□ -1.39
VPS13D-203ENST00000466732 CHRNEQ04844 493 aa6.36□□□□□ -1.39
VPS13D-203ENST00000466732 FIBCD1Q8N539 461 aa6.36□□□□□ -1.39
VPS13D-203ENST00000466732 POU5F2Q8N7G0 328 aa6.36□□□□□ -1.39
VPS13D-203ENST00000466732 MAP6Q96JE9 813 aa6.36□□□□□ -1.39
VPS13D-203ENST00000466732 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.36□□□□□ -1.395e-9■■■□□ 18
VPS13D-203ENST00000466732 FAM53CQ9NYF3 392 aa6.36□□□□□ -1.39
VPS13D-203ENST00000466732 LRRC10BA6NIK2 292 aa6.35□□□□□ -1.39
VPS13D-203ENST00000466732 SMAD7O15105 426 aaKnown RBP6.35□□□□□ -1.39
VPS13D-203ENST00000466732 USP2O75604 605 aaPredicted RBP6.35□□□□□ -1.39
VPS13D-203ENST00000466732 FGRP09769 529 aa6.35□□□□□ -1.39
VPS13D-203ENST00000466732 KIR2DL1P43626 348 aaPredicted RBP6.35□□□□□ -1.39
VPS13D-203ENST00000466732 KIR2DL2P43627 348 aaPredicted RBP6.35□□□□□ -1.39
VPS13D-203ENST00000466732 ARID5AQ03989 594 aa6.35□□□□□ -1.39
VPS13D-203ENST00000466732 MLANAQ16655 118 aa6.35□□□□□ -1.39
VPS13D-203ENST00000466732 CWF19L1Q69YN2 538 aaKnown RBP6.35□□□□□ -1.39
VPS13D-203ENST00000466732 HEATR6Q6AI08 1181 aaKnown RBP6.35□□□□□ -1.39
VPS13D-203ENST00000466732 KIAA1211LQ6NV74 962 aa6.35□□□□□ -1.39
VPS13D-203ENST00000466732 VHLLQ6RSH7 139 aa6.35□□□□□ -1.39
VPS13D-203ENST00000466732 MPZL3Q6UWV2 235 aa6.35□□□□□ -1.39
VPS13D-203ENST00000466732 SLC43A3Q8NBI5 491 aa6.35□□□□□ -1.39
VPS13D-203ENST00000466732 HHIPL1Q96JK4 782 aa6.35□□□□□ -1.39
VPS13D-203ENST00000466732 CDADC1Q9BWV3 514 aa6.35□□□□□ -1.39
VPS13D-203ENST00000466732 SLC12A9Q9BXP2 914 aa6.35□□□□□ -1.39
VPS13D-203ENST00000466732 KRTAP9-2Q9BYQ4 174 aa6.35□□□□□ -1.39
VPS13D-203ENST00000466732 RNF32Q9H0A6 362 aa6.35□□□□□ -1.39
VPS13D-203ENST00000466732 KLHL25Q9H0H3 589 aa6.35□□□□□ -1.39
VPS13D-203ENST00000466732 NOL6Q9H6R4 1146 aaKnown RBP6.35□□□□□ -1.39
VPS13D-203ENST00000466732 WHRNQ9P202 907 aa6.35□□□□□ -1.39
VPS13D-203ENST00000466732 A0A087WZG4 1122 aa6.34□□□□□ -1.39
VPS13D-203ENST00000466732 NOTOA8MTQ0 251 aa6.34□□□□□ -1.39
VPS13D-203ENST00000466732 EPHX1P07099 455 aa6.34□□□□□ -1.39
VPS13D-203ENST00000466732 ENDOUP21128 410 aaKnown RBP6.34□□□□□ -1.39
VPS13D-203ENST00000466732 DNAJA1P31689 397 aaKnown RBP6.34□□□□□ -1.39
VPS13D-203ENST00000466732 ETFBP38117 255 aa6.34□□□□□ -1.39
VPS13D-203ENST00000466732 RTP2Q5QGT7 225 aa6.34□□□□□ -1.39
VPS13D-203ENST00000466732 PRR23BQ6ZRT6 265 aa6.34□□□□□ -1.39
VPS13D-203ENST00000466732 MCF2L2Q86YR7 1114 aa6.34□□□□□ -1.39
VPS13D-203ENST00000466732 FCRL2Q96LA5 508 aaPredicted RBP6.34□□□□□ -1.39
VPS13D-203ENST00000466732 GBP3Q9H0R5 595 aa6.34□□□□□ -1.39
VPS13D-203ENST00000466732 AP5S1Q9NUS5 200 aa6.34□□□□□ -1.39
VPS13D-203ENST00000466732 GPR160Q9UJ42 338 aa6.34□□□□□ -1.39
VPS13D-203ENST00000466732 SF3B6Q9Y3B4 125 aaKnown RBP6.34□□□□□ -1.39
VPS13D-203ENST00000466732 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.33□□□□□ -1.4
VPS13D-203ENST00000466732 PSPNO60542 156 aa6.33□□□□□ -1.4
VPS13D-203ENST00000466732 EFEMP2O95967 443 aa6.33□□□□□ -1.4
VPS13D-203ENST00000466732 GSTM1P09488 218 aa6.33□□□□□ -1.4
VPS13D-203ENST00000466732 PPP2R5DQ14738 602 aa6.33□□□□□ -1.4
VPS13D-203ENST00000466732 TNNI3KQ59H18 835 aa6.33□□□□□ -1.4
VPS13D-203ENST00000466732 CEP128Q6ZU80 1094 aa6.33□□□□□ -1.4
VPS13D-203ENST00000466732 ADAT2Q7Z6V5 191 aaKnown RBP6.33□□□□□ -1.4
VPS13D-203ENST00000466732 ADCY4Q8NFM4 1077 aa6.33□□□□□ -1.4
VPS13D-203ENST00000466732 SHISA4Q96DD7 197 aa6.33□□□□□ -1.4
VPS13D-203ENST00000466732 FGD4Q96M96 766 aa6.33□□□□□ -1.4
VPS13D-203ENST00000466732 ZDHHC15Q96MV8 337 aa6.33□□□□□ -1.4
VPS13D-203ENST00000466732 CWC22Q9HCG8 908 aaKnown RBP6.33□□□□□ -1.4
VPS13D-203ENST00000466732 ERVK13-1Q9NX77 482 aa6.33□□□□□ -1.4
VPS13D-203ENST00000466732 ACTR10Q9NZ32 417 aa6.33□□□□□ -1.4
VPS13D-203ENST00000466732 TNFRSF10DQ9UBN6 386 aa6.33□□□□□ -1.4
VPS13D-203ENST00000466732 PRKAG3Q9UGI9 489 aa6.33□□□□□ -1.4
VPS13D-203ENST00000466732 SUSD2Q9UGT4 822 aa6.33□□□□□ -1.4
VPS13D-203ENST00000466732 DIS3Q9Y2L1 958 aaKnown RBP6.33□□□□□ -1.4
VPS13D-203ENST00000466732 FADS2P1A8MWK0 482 aa6.32□□□□□ -1.4
VPS13D-203ENST00000466732 NRDCO43847 1150 aa6.32□□□□□ -1.4
VPS13D-203ENST00000466732 FARP2O94887 1054 aaPredicted RBP6.32□□□□□ -1.4
VPS13D-203ENST00000466732 CEBPAP49715 358 aaPredicted RBP6.32□□□□□ -1.4
VPS13D-203ENST00000466732 GALK1P51570 392 aa6.32□□□□□ -1.4
VPS13D-203ENST00000466732 MESP2Q0VG99 397 aa6.32□□□□□ -1.4
VPS13D-203ENST00000466732 SNX17Q15036 470 aa6.32□□□□□ -1.4
VPS13D-203ENST00000466732 SLC14A2Q15849 920 aa6.32□□□□□ -1.4
VPS13D-203ENST00000466732 ZNF648Q5T619 568 aaPredicted RBP6.32□□□□□ -1.4
VPS13D-203ENST00000466732 FCRL3Q96P31 734 aaPredicted RBP6.32□□□□□ -1.4
VPS13D-203ENST00000466732 GMLQ99445 158 aa6.32□□□□□ -1.4
VPS13D-203ENST00000466732 ZNF408Q9H9D4 720 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms