RNA–Protein interactions for RNA: ENST00000466684.5

BRD9-201, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 1,417 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-201ENST00000466684 NUP133Q8WUM0 1156 aa19.45■□□□□ 0.7
BRD9-201ENST00000466684 NUP88Q99567 741 aaPredicted RBP19.45■□□□□ 0.7
BRD9-201ENST00000466684 COL25A1Q9BXS0 654 aaPredicted RBP19.45■□□□□ 0.7
BRD9-201ENST00000466684 ZNF287Q9HBT7 754 aa19.45■□□□□ 0.7
BRD9-201ENST00000466684 FAM184BQ9ULE4 1060 aa19.45■□□□□ 0.7
BRD9-201ENST00000466684 CTDP1Q9Y5B0 961 aaPredicted RBP19.45■□□□□ 0.7
BRD9-201ENST00000466684 A0A0C4DFX4 3053 aa19.45■□□□□ 0.7
BRD9-201ENST00000466684 GSG1L2A8MUP6 293 aa19.44■□□□□ 0.7
BRD9-201ENST00000466684 MINDY4BA8MYZ0 360 aa19.44■□□□□ 0.7
BRD9-201ENST00000466684 ATP2A1O14983 1001 aa19.44■□□□□ 0.7
BRD9-201ENST00000466684 SMARCA5O60264 1052 aaPredicted RBP19.44■□□□□ 0.7
BRD9-201ENST00000466684 ZBED4O75132 1171 aa19.44■□□□□ 0.7
BRD9-201ENST00000466684 ADAMTS4O75173 837 aa19.44■□□□□ 0.7
BRD9-201ENST00000466684 NDUFB10O96000 172 aa19.44■□□□□ 0.7
BRD9-201ENST00000466684 MAMDC4Q6UXC1 1216 aa19.44■□□□□ 0.7
BRD9-201ENST00000466684 KBTBD3Q8NAB2 608 aa19.44■□□□□ 0.7
BRD9-201ENST00000466684 GPATCH3Q96I76 525 aa19.44■□□□□ 0.7
BRD9-201ENST00000466684 RNPC3Q96LT9 517 aaKnown RBP19.44■□□□□ 0.7
BRD9-201ENST00000466684 TOX2Q96NM4 488 aa19.44■□□□□ 0.7
BRD9-201ENST00000466684 STARD7Q9NQZ5 370 aa19.44■□□□□ 0.7
BRD9-201ENST00000466684 TMEM39AQ9NV64 488 aa19.44■□□□□ 0.7
BRD9-201ENST00000466684 RCAN3Q9UKA8 241 aa19.44■□□□□ 0.7
BRD9-201ENST00000466684 MOXD2PA6NHM9 499 aa19.43■□□□□ 0.7
BRD9-201ENST00000466684 DCDC2CA8MYV0 355 aa19.43■□□□□ 0.7
BRD9-201ENST00000466684 GNAT2P19087 354 aa19.43■□□□□ 0.7
BRD9-201ENST00000466684 ITGB8P26012 769 aa19.43■□□□□ 0.7
BRD9-201ENST00000466684 ACLYP53396 1101 aa19.43■□□□□ 0.7
BRD9-201ENST00000466684 ANKRD33Q7Z3H0 272 aa19.43■□□□□ 0.7
BRD9-201ENST00000466684 ZNF467Q7Z7K2 595 aaPredicted RBP19.43■□□□□ 0.7
BRD9-201ENST00000466684 STK11IPQ8N1F8 1099 aa19.43■□□□□ 0.7
BRD9-201ENST00000466684 APPBP2Q92624 585 aa19.43■□□□□ 0.7
BRD9-201ENST00000466684 LENG1Q96BZ8 264 aaPredicted RBP19.43■□□□□ 0.7
BRD9-201ENST00000466684 SYNRGQ9UMZ2 1314 aa19.43■□□□□ 0.7
BRD9-201ENST00000466684 DNAJC25-GNG10A0A024R161 153 aa19.42■□□□□ 0.7
BRD9-201ENST00000466684 TMEM265A0A087WTH1 108 aa19.42■□□□□ 0.7
BRD9-201ENST00000466684 ZFYP08048 801 aaPredicted RBP19.42■□□□□ 0.7
BRD9-201ENST00000466684 FPGSQ05932 587 aa19.42■□□□□ 0.7
BRD9-201ENST00000466684 ZNF444Q8N0Y2 327 aaPredicted RBP19.42■□□□□ 0.7
BRD9-201ENST00000466684 CPXCR1Q8N123 301 aa19.42■□□□□ 0.7
BRD9-201ENST00000466684 MAFAQ8NHW3 353 aaPredicted RBP19.42■□□□□ 0.7
BRD9-201ENST00000466684 CLIP2Q9UDT6 1046 aa19.42■□□□□ 0.7
BRD9-201ENST00000466684 ZHX1Q9UKY1 873 aaPredicted RBP19.42■□□□□ 0.7
BRD9-201ENST00000466684 SYNPO2Q9UMS6 1093 aa19.42■□□□□ 0.7
BRD9-201ENST00000466684 RIPK3Q9Y572 518 aa19.42■□□□□ 0.7
BRD9-201ENST00000466684 RNF113AO15541 343 aaKnown RBP19.42■□□□□ 0.7
BRD9-201ENST00000466684 DUSP11O75319 330 aaKnown RBP19.42■□□□□ 0.7
BRD9-201ENST00000466684 SNAI1O95863 264 aaPredicted RBP19.42■□□□□ 0.7
BRD9-201ENST00000466684 SLC4A3P48751 1232 aa19.42■□□□□ 0.7
BRD9-201ENST00000466684 TDO2P48775 406 aa19.42■□□□□ 0.7
BRD9-201ENST00000466684 KLHDC9Q8NEP7 349 aa19.42■□□□□ 0.7
BRD9-201ENST00000466684 OSBP2Q969R2 916 aa19.42■□□□□ 0.7
BRD9-201ENST00000466684 TTYH1Q9H313 450 aaPredicted RBP19.42■□□□□ 0.7
BRD9-201ENST00000466684 FBXO40Q9UH90 709 aa19.42■□□□□ 0.7
BRD9-201ENST00000466684 IGKV6D-41A0A0C4DH26 115 aa19.41■□□□□ 0.7
BRD9-201ENST00000466684 FAAP100Q0VG06 881 aa19.41■□□□□ 0.7
BRD9-201ENST00000466684 KCNA10Q16322 511 aa19.41■□□□□ 0.7
BRD9-201ENST00000466684 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.41■□□□□ 0.77e-6■□□□□ 10.8
BRD9-201ENST00000466684 ANKRD35Q8N283 1001 aa19.41■□□□□ 0.7
BRD9-201ENST00000466684 MKL1Q969V6 931 aa19.41■□□□□ 0.7
BRD9-201ENST00000466684 KIFC2Q96AC6 838 aa19.41■□□□□ 0.7
BRD9-201ENST00000466684 SPC25Q9HBM1 224 aa19.41■□□□□ 0.7
BRD9-201ENST00000466684 SLC38A10Q9HBR0 1119 aa19.41■□□□□ 0.7
BRD9-201ENST00000466684 FEM1BQ9UK73 627 aa19.41■□□□□ 0.7
BRD9-201ENST00000466684 GPAA1O43292 621 aa19.4■□□□□ 0.7
BRD9-201ENST00000466684 APPP05067 770 aa19.4■□□□□ 0.7
BRD9-201ENST00000466684 CST5P28325 142 aaPredicted RBP19.4■□□□□ 0.7
BRD9-201ENST00000466684 OAZ1P54368 228 aa19.4■□□□□ 0.7
BRD9-201ENST00000466684 EPHB4P54760 987 aa19.4■□□□□ 0.7
BRD9-201ENST00000466684 ACVR2BQ13705 512 aa19.4■□□□□ 0.7
BRD9-201ENST00000466684 LRRFIP1Q32MZ4 808 aaKnown RBP19.4■□□□□ 0.7
BRD9-201ENST00000466684 PCSK9Q8NBP7 692 aaKnown RBP19.4■□□□□ 0.7
BRD9-201ENST00000466684 CHST13Q8NET6 341 aa19.4■□□□□ 0.7
BRD9-201ENST00000466684 MYLIPQ8WY64 445 aa19.4■□□□□ 0.7
BRD9-201ENST00000466684 GLT1D1Q96MS3 346 aa19.4■□□□□ 0.7
BRD9-201ENST00000466684 ABHD16BQ9H3Z7 469 aa19.4■□□□□ 0.7
BRD9-201ENST00000466684 RAVER2Q9HCJ3 691 aaKnown RBP19.4■□□□□ 0.7
BRD9-201ENST00000466684 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.4■□□□□ 0.7
BRD9-201ENST00000466684 MTMR4Q9NYA4 1195 aa19.4■□□□□ 0.7
BRD9-201ENST00000466684 ELP1O95163 1332 aa19.4■□□□□ 0.7
BRD9-201ENST00000466684 MROH7Q68CQ1 1323 aa19.4■□□□□ 0.7
BRD9-201ENST00000466684 MYH4Q9Y623 1939 aa19.4■□□□□ 0.7
BRD9-201ENST00000466684 TTLL1O95922 423 aa19.39■□□□□ 0.69
BRD9-201ENST00000466684 FOSL2P15408 326 aa19.39■□□□□ 0.69
BRD9-201ENST00000466684 CCSAPQ6IQ19 270 aaPredicted RBP19.39■□□□□ 0.69
BRD9-201ENST00000466684 GMCL1P1Q8NEA9 526 aa19.39■□□□□ 0.69
BRD9-201ENST00000466684 CEP95Q96GE4 821 aa19.39■□□□□ 0.69
BRD9-201ENST00000466684 EPB41L4AQ9HCS5 686 aaPredicted RBP19.39■□□□□ 0.69
BRD9-201ENST00000466684 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.38■□□□□ 0.69
BRD9-201ENST00000466684 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.38■□□□□ 0.69
BRD9-201ENST00000466684 PRDM1O75626 825 aa19.38■□□□□ 0.69
BRD9-201ENST00000466684 TIMP1P01033 207 aa19.38■□□□□ 0.69
BRD9-201ENST00000466684 C6orf222P0C671 652 aaPredicted RBP19.38■□□□□ 0.69
BRD9-201ENST00000466684 FDX1P10109 184 aa19.38■□□□□ 0.69
BRD9-201ENST00000466684 NACAP1Q9BZK3 213 aa19.38■□□□□ 0.69
BRD9-201ENST00000466684 PATL2C9JE40 543 aaKnown RBP19.37■□□□□ 0.69
BRD9-201ENST00000466684 C20orf194Q5TEA3 1177 aa19.37■□□□□ 0.69
BRD9-201ENST00000466684 CCDC174Q6PII3 467 aa19.37■□□□□ 0.69
BRD9-201ENST00000466684 DCTPP1Q9H773 170 aa19.37■□□□□ 0.69
BRD9-201ENST00000466684 TBX21Q9UL17 535 aa19.37■□□□□ 0.69
BRD9-201ENST00000466684 MYADML2A6NDP7 307 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms