RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 PCDHA6Q9UN73 950 aa11.77□□□□□ -0.53
UFD1-206ENST00000466373 PCDHA8Q9Y5H6 950 aa11.77□□□□□ -0.53
UFD1-206ENST00000466373 MORC2Q9Y6X9 1032 aaPredicted RBP11.77□□□□□ -0.53
UFD1-206ENST00000466373 RNF225M0QZC1 329 aaPredicted RBP11.77□□□□□ -0.53
UFD1-206ENST00000466373 TUBB4AP04350 444 aa11.77□□□□□ -0.53
UFD1-206ENST00000466373 PRCPP42785 496 aa11.77□□□□□ -0.53
UFD1-206ENST00000466373 CLCN6P51797 869 aa11.77□□□□□ -0.53
UFD1-206ENST00000466373 PAK1Q13153 545 aa11.77□□□□□ -0.53
UFD1-206ENST00000466373 ZNF804AQ7Z570 1209 aa11.77□□□□□ -0.53
UFD1-206ENST00000466373 ST7Q9NRC1 585 aa11.77□□□□□ -0.53
UFD1-206ENST00000466373 MYH8P13535 1937 aa11.77□□□□□ -0.53
UFD1-206ENST00000466373 KLRF2D3W0D1 207 aa11.76□□□□□ -0.53
UFD1-206ENST00000466373 GYPCP04921 128 aa11.76□□□□□ -0.53
UFD1-206ENST00000466373 CCDC175P0C221 793 aa11.76□□□□□ -0.53
UFD1-206ENST00000466373 RASA1P20936 1047 aa11.76□□□□□ -0.53
UFD1-206ENST00000466373 CCDC12Q8WUD4 166 aaPredicted RBP11.76□□□□□ -0.53
UFD1-206ENST00000466373 RPGRQ92834 1020 aaKnown RBP11.76□□□□□ -0.53
UFD1-206ENST00000466373 CTAGE1Q96RT6 745 aa11.76□□□□□ -0.53
UFD1-206ENST00000466373 USP21Q9UK80 565 aa11.76□□□□□ -0.53
UFD1-206ENST00000466373 LEMD3Q9Y2U8 911 aa11.76□□□□□ -0.53
UFD1-206ENST00000466373 BTAF1O14981 1849 aa11.76□□□□□ -0.53
UFD1-206ENST00000466373 LONP1P36776 959 aaKnown RBP11.76□□□□□ -0.53
UFD1-206ENST00000466373 UBA7P41226 1012 aa11.76□□□□□ -0.53
UFD1-206ENST00000466373 NAALADL2Q58DX5 795 aa11.76□□□□□ -0.53
UFD1-206ENST00000466373 EYA3Q99504 573 aa11.76□□□□□ -0.53
UFD1-206ENST00000466373 DISC1Q9NRI5 854 aa11.76□□□□□ -0.53
UFD1-206ENST00000466373 TOM1O60784 492 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 MFAP3LO75121 409 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 PBX1P40424 430 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 LETM2Q2VYF4 491 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 ZNF658Q5TYW1 1059 aaPredicted RBP11.75□□□□□ -0.53
UFD1-206ENST00000466373 ARL6IP4Q66PJ3 421 aaKnown RBP11.75□□□□□ -0.53
UFD1-206ENST00000466373 PRR5LQ6MZQ0 368 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 TEX11Q8IYF3 940 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 PANX2Q96RD6 677 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 RTFDC1Q9BY42 306 aaPredicted RBP11.75□□□□□ -0.53
UFD1-206ENST00000466373 CD209Q9NNX6 404 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.75□□□□□ -0.53
UFD1-206ENST00000466373 KCNJ18B7U540 433 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 STXBP3O00186 592 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 TADA3O75528 432 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 ABL1P00519 1130 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 H2AFXP16104 143 aaPredicted RBP11.75□□□□□ -0.53
UFD1-206ENST00000466373 CDK8P49336 464 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 PMS1P54277 932 aaKnown RBP11.75□□□□□ -0.53
UFD1-206ENST00000466373 NAPAP54920 295 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 GSTO1P78417 241 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 DMTNQ08495 405 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 KCNJ12Q14500 433 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 ACRBPQ8NEB7 543 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 NUP88Q99567 741 aaPredicted RBP11.75□□□□□ -0.53
UFD1-206ENST00000466373 UBA5Q9GZZ9 404 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 BARHL2Q9NY43 387 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 RWDD2AQ9UIY3 292 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 ADGRG1Q9Y653 693 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 GOLGA6L9A6NEM1 432 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 M0R2N6 131 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 COPB1P53618 953 aaKnown RBP11.75□□□□□ -0.53
UFD1-206ENST00000466373 TCP11X2Q5H9J9 407 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 TEX35Q5T0J7 233 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 LRRC15Q8TF66 581 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 KIFC2Q96AC6 838 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 LRRC4BQ9NT99 713 aa11.75□□□□□ -0.53
UFD1-206ENST00000466373 PALM3A6NDB9 673 aaPredicted RBP11.74□□□□□ -0.53
UFD1-206ENST00000466373 CCNT1O60563 726 aaKnown RBP11.74□□□□□ -0.53
UFD1-206ENST00000466373 GNAQP50148 359 aa11.74□□□□□ -0.53
UFD1-206ENST00000466373 EIF6P56537 245 aaKnown RBP11.74□□□□□ -0.53
UFD1-206ENST00000466373 UBXN1Q04323 297 aa11.74□□□□□ -0.53
UFD1-206ENST00000466373 CT47A1Q5JQC4 288 aaPredicted RBP11.74□□□□□ -0.53
UFD1-206ENST00000466373 MFSD14BQ5SR56 506 aa11.74□□□□□ -0.53
UFD1-206ENST00000466373 SH3GLB2Q9NR46 395 aa11.74□□□□□ -0.53
UFD1-206ENST00000466373 PRDM4Q9UKN5 801 aa11.74□□□□□ -0.53
UFD1-206ENST00000466373 F8W031 263 aaPredicted RBP11.74□□□□□ -0.53
UFD1-206ENST00000466373 TFRCP02786 760 aaKnown RBP11.74□□□□□ -0.53
UFD1-206ENST00000466373 LDHCP07864 332 aa11.74□□□□□ -0.53
UFD1-206ENST00000466373 MAP3K9P80192 1104 aa11.74□□□□□ -0.53
UFD1-206ENST00000466373 PPP2R3AQ06190 1150 aa11.74□□□□□ -0.53
UFD1-206ENST00000466373 KRT222Q8N1A0 295 aa11.74□□□□□ -0.53
UFD1-206ENST00000466373 CCDC148Q8NFR7 591 aa11.74□□□□□ -0.53
UFD1-206ENST00000466373 CEP95Q96GE4 821 aa11.74□□□□□ -0.53
UFD1-206ENST00000466373 LTBP4Q8N2S1 1624 aa11.74□□□□□ -0.53
UFD1-206ENST00000466373 COL24A1Q17RW2 1714 aa11.73□□□□□ -0.53
UFD1-206ENST00000466373 UBAP1LF5GYI3 381 aa11.73□□□□□ -0.53
UFD1-206ENST00000466373 RGL2O15211 777 aa11.73□□□□□ -0.53
UFD1-206ENST00000466373 SEC31AO94979 1220 aaKnown RBP11.73□□□□□ -0.53
UFD1-206ENST00000466373 TPM1P09493 284 aa11.73□□□□□ -0.53
UFD1-206ENST00000466373 PPP4CP60510 307 aa11.73□□□□□ -0.53
UFD1-206ENST00000466373 PICALMQ13492 652 aa11.73□□□□□ -0.53
UFD1-206ENST00000466373 CLEC10AQ8IUN9 316 aa11.73□□□□□ -0.53
UFD1-206ENST00000466373 ANKS1AQ92625 1134 aa11.73□□□□□ -0.53
UFD1-206ENST00000466373 RMND1Q9NWS8 449 aa11.73□□□□□ -0.53
UFD1-206ENST00000466373 FRMPD2Q68DX3 1309 aaPredicted RBP11.73□□□□□ -0.53
UFD1-206ENST00000466373 SMCO2A6NFE2 343 aa11.73□□□□□ -0.53
UFD1-206ENST00000466373 C6orf229H3BNL8 230 aa11.73□□□□□ -0.53
UFD1-206ENST00000466373 PARP1P09874 1014 aaKnown RBP11.73□□□□□ -0.53
UFD1-206ENST00000466373 ZNF569Q5MCW4 686 aa11.73□□□□□ -0.53
UFD1-206ENST00000466373 JAKMIP3Q5VZ66 844 aa11.73□□□□□ -0.53
UFD1-206ENST00000466373 CNGA4Q8IV77 575 aa11.73□□□□□ -0.53
UFD1-206ENST00000466373 ANKRD20A12PQ8NF67 263 aa11.73□□□□□ -0.53
UFD1-206ENST00000466373 ZBTB9Q96C00 473 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms