RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 TTBK2Q6IQ55 1244 aa12□□□□□ -0.49
CD40-204ENST00000466205 CCDC174Q6PII3 467 aa12□□□□□ -0.49
CD40-204ENST00000466205 PRPF38AQ8NAV1 312 aaKnown RBP12□□□□□ -0.49
CD40-204ENST00000466205 U2AF1L4Q8WU68 220 aaKnown RBP12□□□□□ -0.49
CD40-204ENST00000466205 MMP19Q99542 508 aa12□□□□□ -0.49
CD40-204ENST00000466205 GPCPD1Q9NPB8 672 aa12□□□□□ -0.49
CD40-204ENST00000466205 HOMER2Q9NSB8 354 aa12□□□□□ -0.49
CD40-204ENST00000466205 CTNNA3Q9UI47 895 aa12□□□□□ -0.49
CD40-204ENST00000466205 ADAMTS5Q9UNA0 930 aa12□□□□□ -0.49
CD40-204ENST00000466205 RIPK3Q9Y572 518 aa12□□□□□ -0.49
CD40-204ENST00000466205 TAF6LQ9Y6J9 622 aa12□□□□□ -0.49
CD40-204ENST00000466205 RBBP6Q7Z6E9 1792 aaKnown RBP12□□□□□ -0.49
CD40-204ENST00000466205 SLC34A2O95436 690 aa11.99□□□□□ -0.49
CD40-204ENST00000466205 TFRCP02786 760 aaKnown RBP11.99□□□□□ -0.49
CD40-204ENST00000466205 GJB1P08034 283 aa11.99□□□□□ -0.49
CD40-204ENST00000466205 TOP1P11387 765 aaKnown RBP11.99□□□□□ -0.49
CD40-204ENST00000466205 CYP2C19P33261 490 aa11.99□□□□□ -0.49
CD40-204ENST00000466205 GJA8P48165 433 aa11.99□□□□□ -0.49
CD40-204ENST00000466205 CACNB2Q08289 660 aaPredicted RBP11.99□□□□□ -0.49
CD40-204ENST00000466205 RIOX2Q8IUF8 465 aa11.99□□□□□ -0.49
CD40-204ENST00000466205 SHCBP1Q8NEM2 672 aa11.99□□□□□ -0.49
CD40-204ENST00000466205 GMCL1Q96IK5 515 aa11.99□□□□□ -0.49
CD40-204ENST00000466205 MROH8Q9H579 483 aa11.99□□□□□ -0.49
CD40-204ENST00000466205 HMX1Q9NP08 348 aaPredicted RBP11.99□□□□□ -0.49
CD40-204ENST00000466205 TNKSO95271 1327 aa11.98□□□□□ -0.49
CD40-204ENST00000466205 RPTORQ8N122 1335 aa11.98□□□□□ -0.49
CD40-204ENST00000466205 SGPL1O95470 568 aa11.98□□□□□ -0.49
CD40-204ENST00000466205 SLC25A27O95847 323 aa11.98□□□□□ -0.49
CD40-204ENST00000466205 CYP21A2P08686 494 aa11.98□□□□□ -0.49
CD40-204ENST00000466205 GOLGA8HP0CJ92 632 aa11.98□□□□□ -0.49
CD40-204ENST00000466205 PCP11498 1178 aaKnown RBP11.98□□□□□ -0.49
CD40-204ENST00000466205 FCER1AP12319 257 aa11.98□□□□□ -0.49
CD40-204ENST00000466205 XRCC5P13010 732 aaKnown RBP11.98□□□□□ -0.49
CD40-204ENST00000466205 CNGA1P29973 690 aa11.98□□□□□ -0.49
CD40-204ENST00000466205 NOVP48745 357 aa11.98□□□□□ -0.49
CD40-204ENST00000466205 PPP4R3BQ5MIZ7 849 aa11.98□□□□□ -0.49
CD40-204ENST00000466205 RCSD1Q6JBY9 416 aa11.98□□□□□ -0.49
CD40-204ENST00000466205 CYB5R4Q7L1T6 521 aa11.98□□□□□ -0.49
CD40-204ENST00000466205 CHST3Q7LGC8 479 aa11.98□□□□□ -0.49
CD40-204ENST00000466205 IQCA1Q86XH1 822 aa11.98□□□□□ -0.49
CD40-204ENST00000466205 TEX13BQ9BXU2 312 aa11.98□□□□□ -0.49
CD40-204ENST00000466205 CPVLQ9H3G5 476 aa11.98□□□□□ -0.49
CD40-204ENST00000466205 SLC38A10Q9HBR0 1119 aa11.98□□□□□ -0.49
CD40-204ENST00000466205 TCP11L1Q9NUJ3 509 aa11.98□□□□□ -0.49
CD40-204ENST00000466205 ZSWIM5Q9P217 1185 aa11.98□□□□□ -0.49
CD40-204ENST00000466205 PRR12Q9ULL5 1215 aa11.98□□□□□ -0.49
CD40-204ENST00000466205 SYNPO2Q9UMS6 1093 aa11.98□□□□□ -0.49
CD40-204ENST00000466205 RBM8AQ9Y5S9 174 aaKnown RBP11.98□□□□□ -0.49
CD40-204ENST00000466205 CENPBP07199 599 aaPredicted RBP11.97□□□□□ -0.49
CD40-204ENST00000466205 PDHBP11177 359 aa11.97□□□□□ -0.49
CD40-204ENST00000466205 KCTD2Q14681 263 aa11.97□□□□□ -0.49
CD40-204ENST00000466205 PRAMEF19Q5SWL8 479 aa11.97□□□□□ -0.49
CD40-204ENST00000466205 MFSD14CQ5VZR4 134 aa11.97□□□□□ -0.49
CD40-204ENST00000466205 ANO1Q5XXA6 986 aa11.97□□□□□ -0.49
CD40-204ENST00000466205 KIAA1211Q6ZU35 1233 aa11.97□□□□□ -0.49
CD40-204ENST00000466205 STOX1Q6ZVD7 989 aa11.97□□□□□ -0.49
CD40-204ENST00000466205 FAM160B2Q86V87 743 aa11.97□□□□□ -0.49
CD40-204ENST00000466205 CHURC1Q8WUH1 139 aa11.97□□□□□ -0.49
CD40-204ENST00000466205 DCAF4Q8WV16 495 aa11.97□□□□□ -0.49
CD40-204ENST00000466205 AGBL1Q96MI9 1066 aa11.97□□□□□ -0.49
CD40-204ENST00000466205 ZSCAN10Q96SZ4 725 aaPredicted RBP11.97□□□□□ -0.49
CD40-204ENST00000466205 ESYT1Q9BSJ8 1104 aa11.97□□□□□ -0.49
CD40-204ENST00000466205 KRT23Q9C075 422 aa11.97□□□□□ -0.49
CD40-204ENST00000466205 KAT14Q9H8E8 782 aa11.97□□□□□ -0.49
CD40-204ENST00000466205 ANO2Q9NQ90 1003 aa11.97□□□□□ -0.49
CD40-204ENST00000466205 PAK6Q9NQU5 681 aaPredicted RBP11.97□□□□□ -0.49
CD40-204ENST00000466205 U3KPZ7 1027 aaPredicted RBP11.97□□□□□ -0.49
CD40-204ENST00000466205 ZNF536O15090 1300 aa11.96□□□□□ -0.49
CD40-204ENST00000466205 STRNO43815 780 aa11.96□□□□□ -0.49
CD40-204ENST00000466205 ALAS1P13196 640 aa11.96□□□□□ -0.49
CD40-204ENST00000466205 TRDNQ13061 729 aa11.96□□□□□ -0.49
CD40-204ENST00000466205 BMP2KLQ5H9B9 411 aa11.96□□□□□ -0.49
CD40-204ENST00000466205 TRMT44Q8IYL2 757 aaKnown RBP11.96□□□□□ -0.49
CD40-204ENST00000466205 DIS3LQ8TF46 1054 aaKnown RBP11.96□□□□□ -0.49
CD40-204ENST00000466205 UBAC1Q9BSL1 405 aa11.96□□□□□ -0.49
CD40-204ENST00000466205 UBA5Q9GZZ9 404 aa11.96□□□□□ -0.49
CD40-204ENST00000466205 LSG1Q9H089 658 aaKnown RBP11.96□□□□□ -0.49
CD40-204ENST00000466205 ZNF236Q9UL36 1845 aa11.95□□□□□ -0.5
CD40-204ENST00000466205 E7EWF7 191 aa11.95□□□□□ -0.5
CD40-204ENST00000466205 FARP2O94887 1054 aaPredicted RBP11.95□□□□□ -0.5
CD40-204ENST00000466205 MYCNP04198 464 aaPredicted RBP11.95□□□□□ -0.5
CD40-204ENST00000466205 HOXC6P09630 235 aa11.95□□□□□ -0.5
CD40-204ENST00000466205 MAP3K21Q5TCX8 1036 aa11.95□□□□□ -0.5
CD40-204ENST00000466205 SYDE2Q5VT97 1194 aa11.95□□□□□ -0.5
CD40-204ENST00000466205 RALYLQ86SE5 291 aaKnown RBP11.95□□□□□ -0.5
CD40-204ENST00000466205 ANKRD35Q8N283 1001 aa11.95□□□□□ -0.5
CD40-204ENST00000466205 ENAHQ8N8S7 591 aaPredicted RBP11.95□□□□□ -0.5
CD40-204ENST00000466205 PNMA1Q8ND90 353 aa11.95□□□□□ -0.5
CD40-204ENST00000466205 TRPV1Q8NER1 839 aa11.95□□□□□ -0.5
CD40-204ENST00000466205 MAP4K1Q92918 833 aa11.95□□□□□ -0.5
CD40-204ENST00000466205 DDX11Q96FC9 970 aa11.95□□□□□ -0.5
CD40-204ENST00000466205 MAML3Q96JK9 1138 aa11.95□□□□□ -0.5
CD40-204ENST00000466205 TTC14Q96N46 770 aa11.95□□□□□ -0.5
CD40-204ENST00000466205 CNNM2Q9H8M5 875 aa11.95□□□□□ -0.5
CD40-204ENST00000466205 RNF146Q9NTX7 359 aa11.95□□□□□ -0.5
CD40-204ENST00000466205 ATP2A1O14983 1001 aa11.94□□□□□ -0.5
CD40-204ENST00000466205 ZNF543Q08ER8 600 aa11.94□□□□□ -0.5
CD40-204ENST00000466205 MUM1L1Q5H9M0 696 aa11.94□□□□□ -0.5
CD40-204ENST00000466205 IFIT1BQ5T764 474 aaKnown RBP11.94□□□□□ -0.5
CD40-204ENST00000466205 DGKHQ86XP1 1220 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms