RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 KCND1Q9NSA2 647 aa18.47■□□□□ 0.55
SLX4-202ENST00000466154 CCDC175P0C221 793 aa18.46■□□□□ 0.55
SLX4-202ENST00000466154 PRCPP42785 496 aa18.46■□□□□ 0.55
SLX4-202ENST00000466154 UBXN1Q04323 297 aa18.46■□□□□ 0.55
SLX4-202ENST00000466154 ZNF771Q7L3S4 317 aaPredicted RBP18.46■□□□□ 0.55
SLX4-202ENST00000466154 ELOA2Q8IYF1 753 aaPredicted RBP18.46■□□□□ 0.55
SLX4-202ENST00000466154 ANKRD20A12PQ8NF67 263 aa18.46■□□□□ 0.55
SLX4-202ENST00000466154 ADD3Q9UEY8 706 aaKnown RBP18.46■□□□□ 0.55
SLX4-202ENST00000466154 PUF60Q9UHX1 559 aaKnown RBP18.46■□□□□ 0.55
SLX4-202ENST00000466154 DDX41Q9UJV9 622 aaKnown RBP18.46■□□□□ 0.55
SLX4-202ENST00000466154 SEC31AO94979 1220 aaKnown RBP18.46■□□□□ 0.55
SLX4-202ENST00000466154 PARP3Q9Y6F1 533 aa18.46■□□□□ 0.55
SLX4-202ENST00000466154 KCNJ6P48051 423 aa18.45■□□□□ 0.54
SLX4-202ENST00000466154 SLC35G1Q2M3R5 365 aa18.45■□□□□ 0.54
SLX4-202ENST00000466154 PDXDC2PQ6P474 469 aa18.45■□□□□ 0.54
SLX4-202ENST00000466154 DGKHQ86XP1 1220 aa18.45■□□□□ 0.54
SLX4-202ENST00000466154 BIN2Q9UBW5 565 aaPredicted RBP18.45■□□□□ 0.54
SLX4-202ENST00000466154 PCDHA6Q9UN73 950 aa18.45■□□□□ 0.54
SLX4-202ENST00000466154 PCDHA8Q9Y5H6 950 aa18.45■□□□□ 0.54
SLX4-202ENST00000466154 PHLPP2Q6ZVD8 1323 aa18.45■□□□□ 0.54
SLX4-202ENST00000466154 KCNJ18B7U540 433 aa18.45■□□□□ 0.54
SLX4-202ENST00000466154 GSTO1P78417 241 aa18.45■□□□□ 0.54
SLX4-202ENST00000466154 KCNJ12Q14500 433 aa18.45■□□□□ 0.54
SLX4-202ENST00000466154 E2F4Q16254 413 aa18.45■□□□□ 0.54
SLX4-202ENST00000466154 CCDC178Q5BJE1 867 aa18.45■□□□□ 0.54
SLX4-202ENST00000466154 PCMTD1Q96MG8 357 aaPredicted RBP18.45■□□□□ 0.54
SLX4-202ENST00000466154 GTPBP6O43824 516 aaPredicted RBP18.45■□□□□ 0.54
SLX4-202ENST00000466154 CLCN6P51797 869 aa18.45■□□□□ 0.54
SLX4-202ENST00000466154 CCDC93Q567U6 631 aa18.45■□□□□ 0.54
SLX4-202ENST00000466154 CTAGE1Q96RT6 745 aa18.45■□□□□ 0.54
SLX4-202ENST00000466154 RASA1P20936 1047 aa18.44■□□□□ 0.54
SLX4-202ENST00000466154 CDK8P49336 464 aa18.44■□□□□ 0.54
SLX4-202ENST00000466154 ZNF569Q5MCW4 686 aa18.44■□□□□ 0.54
SLX4-202ENST00000466154 TRIM47Q96LD4 638 aa18.44■□□□□ 0.54
SLX4-202ENST00000466154 CD209Q9NNX6 404 aa18.44■□□□□ 0.54
SLX4-202ENST00000466154 DISC1Q9NRI5 854 aa18.44■□□□□ 0.54
SLX4-202ENST00000466154 TFRCP02786 760 aaKnown RBP18.44■□□□□ 0.54
SLX4-202ENST00000466154 LDHCP07864 332 aa18.44■□□□□ 0.54
SLX4-202ENST00000466154 TECP42680 631 aa18.44■□□□□ 0.54
SLX4-202ENST00000466154 VPS72Q15906 364 aa18.44■□□□□ 0.54
SLX4-202ENST00000466154 SOGA3Q5TF21 947 aa18.44■□□□□ 0.54
SLX4-202ENST00000466154 SEC63Q9UGP8 760 aaKnown RBP18.44■□□□□ 0.54
SLX4-202ENST00000466154 SMCO2A6NFE2 343 aa18.44■□□□□ 0.54
SLX4-202ENST00000466154 GYPCP04921 128 aa18.44■□□□□ 0.54
SLX4-202ENST00000466154 PPP2R3AQ06190 1150 aa18.44■□□□□ 0.54
SLX4-202ENST00000466154 APTXQ7Z2E3 356 aaKnown RBP18.44■□□□□ 0.54
SLX4-202ENST00000466154 LRRC47Q8N1G4 583 aaKnown RBP18.44■□□□□ 0.54
SLX4-202ENST00000466154 GGA1Q9UJY5 639 aa18.44■□□□□ 0.54
SLX4-202ENST00000466154 PARP1P09874 1014 aaKnown RBP18.43■□□□□ 0.54
SLX4-202ENST00000466154 TRAPPC10P48553 1259 aa18.43■□□□□ 0.54
SLX4-202ENST00000466154 GRM4Q14833 912 aa18.43■□□□□ 0.54
SLX4-202ENST00000466154 RC3H1Q5TC82 1133 aaKnown RBP18.43■□□□□ 0.54
SLX4-202ENST00000466154 PRR5LQ6MZQ0 368 aa18.43■□□□□ 0.54
SLX4-202ENST00000466154 HPS3Q969F9 1004 aa18.43■□□□□ 0.54
SLX4-202ENST00000466154 PIGSQ96S52 555 aa18.43■□□□□ 0.54
SLX4-202ENST00000466154 ZNF446Q9NWS9 450 aa18.43■□□□□ 0.54
SLX4-202ENST00000466154 LEMD3Q9Y2U8 911 aa18.43■□□□□ 0.54
SLX4-202ENST00000466154 RNF225M0QZC1 329 aaPredicted RBP18.43■□□□□ 0.54
SLX4-202ENST00000466154 ABL1P00519 1130 aa18.43■□□□□ 0.54
SLX4-202ENST00000466154 GNAQP50148 359 aa18.43■□□□□ 0.54
SLX4-202ENST00000466154 GTF2IP78347 998 aa18.43■□□□□ 0.54
SLX4-202ENST00000466154 KRT222Q8N1A0 295 aa18.43■□□□□ 0.54
SLX4-202ENST00000466154 CCDC148Q8NFR7 591 aa18.43■□□□□ 0.54
SLX4-202ENST00000466154 CEP95Q96GE4 821 aa18.43■□□□□ 0.54
SLX4-202ENST00000466154 SLF1Q9BQI6 1058 aa18.43■□□□□ 0.54
SLX4-202ENST00000466154 MFAP3LO75121 409 aa18.42■□□□□ 0.54
SLX4-202ENST00000466154 SLURP2P0DP57 97 aa18.42■□□□□ 0.54
SLX4-202ENST00000466154 KRT9P35527 623 aa18.42■□□□□ 0.54
SLX4-202ENST00000466154 LONP1P36776 959 aaKnown RBP18.42■□□□□ 0.54
SLX4-202ENST00000466154 COPB1P53618 953 aaKnown RBP18.42■□□□□ 0.54
SLX4-202ENST00000466154 PMS1P54277 932 aaKnown RBP18.42■□□□□ 0.54
SLX4-202ENST00000466154 KIF4BQ2VIQ3 1234 aa18.42■□□□□ 0.54
SLX4-202ENST00000466154 CDKAL1Q5VV42 579 aa18.42■□□□□ 0.54
SLX4-202ENST00000466154 SRRTQ9BXP5 876 aaKnown RBP18.42■□□□□ 0.54
SLX4-202ENST00000466154 GPCPD1Q9NPB8 672 aa18.42■□□□□ 0.54
SLX4-202ENST00000466154 TMEM260Q9NX78 707 aa18.42■□□□□ 0.54
SLX4-202ENST00000466154 AHDC1Q5TGY3 1603 aaPredicted RBP18.42■□□□□ 0.54
SLX4-202ENST00000466154 TXKP42681 527 aa18.42■□□□□ 0.54
SLX4-202ENST00000466154 ZNF658Q5TYW1 1059 aaPredicted RBP18.42■□□□□ 0.54
SLX4-202ENST00000466154 TCP11L1Q9NUJ3 509 aa18.42■□□□□ 0.54
SLX4-202ENST00000466154 STXBP3O00186 592 aa18.42■□□□□ 0.54
SLX4-202ENST00000466154 KIF5CO60282 957 aa18.42■□□□□ 0.54
SLX4-202ENST00000466154 ASIC1P78348 528 aa18.42■□□□□ 0.54
SLX4-202ENST00000466154 TMCO3Q6UWJ1 677 aa18.42■□□□□ 0.54
SLX4-202ENST00000466154 COA7Q96BR5 231 aa18.42■□□□□ 0.54
SLX4-202ENST00000466154 MXD3Q9BW11 206 aa18.42■□□□□ 0.54
SLX4-202ENST00000466154 LRRC4BQ9NT99 713 aa18.42■□□□□ 0.54
SLX4-202ENST00000466154 RMND1Q9NWS8 449 aa18.42■□□□□ 0.54
SLX4-202ENST00000466154 USP17L5A8MUK1 530 aa18.41■□□□□ 0.54
SLX4-202ENST00000466154 TCP11X2Q5H9J9 407 aa18.41■□□□□ 0.54
SLX4-202ENST00000466154 FCHSD1Q86WN1 690 aa18.41■□□□□ 0.54
SLX4-202ENST00000466154 ARGLU1Q9NWB6 273 aaPredicted RBP18.41■□□□□ 0.54
SLX4-202ENST00000466154 BARHL2Q9NY43 387 aa18.41■□□□□ 0.54
SLX4-202ENST00000466154 MKRN1Q9UHC7 482 aaKnown RBP18.41■□□□□ 0.54
SLX4-202ENST00000466154 TFR2Q9UP52 801 aa18.41■□□□□ 0.54
SLX4-202ENST00000466154 ADGRG1Q9Y653 693 aa18.41■□□□□ 0.54
SLX4-202ENST00000466154 TXNRD1Q16881 649 aa18.41■□□□□ 0.54
SLX4-202ENST00000466154 RTFDC1Q9BY42 306 aaPredicted RBP18.41■□□□□ 0.54
SLX4-202ENST00000466154 GOLGA6L9A6NEM1 432 aa18.4■□□□□ 0.54
SLX4-202ENST00000466154 MPHOSPH10O00566 681 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms