RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 TBC1D10BQ4KMP7 808 aaPredicted RBP7□□□□□ -1.29
CHMP3-206ENST00000466032 GPATCH4Q5T3I0 446 aaKnown RBP7□□□□□ -1.29
CHMP3-206ENST00000466032 APOA5Q6Q788 366 aa7□□□□□ -1.29
CHMP3-206ENST00000466032 CYB5R4Q7L1T6 521 aa7□□□□□ -1.29
CHMP3-206ENST00000466032 CDC37L1Q7L3B6 337 aa7□□□□□ -1.29
CHMP3-206ENST00000466032 USP48Q86UV5 1035 aa7□□□□□ -1.29
CHMP3-206ENST00000466032 TRIM22Q8IYM9 498 aa7□□□□□ -1.29
CHMP3-206ENST00000466032 ENAHQ8N8S7 591 aaPredicted RBP7□□□□□ -1.29
CHMP3-206ENST00000466032 CTCFLQ8NI51 663 aaPredicted RBP7□□□□□ -1.29
CHMP3-206ENST00000466032 GTF3C6Q969F1 213 aa7□□□□□ -1.29
CHMP3-206ENST00000466032 ZNF341Q9BYN7 854 aa7□□□□□ -1.29
CHMP3-206ENST00000466032 LY9Q9HBG7 655 aa7□□□□□ -1.29
CHMP3-206ENST00000466032 AS3MTQ9HBK9 375 aa7□□□□□ -1.29
CHMP3-206ENST00000466032 ARHGEF10LQ9HCE6 1279 aa7□□□□□ -1.29
CHMP3-206ENST00000466032 MTMR4Q9NYA4 1195 aa7□□□□□ -1.29
CHMP3-206ENST00000466032 CHMP5Q9NZZ3 219 aa7□□□□□ -1.29
CHMP3-206ENST00000466032 TPCN1Q9ULQ1 816 aa7□□□□□ -1.29
CHMP3-206ENST00000466032 SMC3Q9UQE7 1217 aa7□□□□□ -1.29
CHMP3-206ENST00000466032 ATP6V1DQ9Y5K8 247 aa7□□□□□ -1.29
CHMP3-206ENST00000466032 CDK5RAP2Q96SN8 1893 aa7□□□□□ -1.29
CHMP3-206ENST00000466032 BAZ2AQ9UIF9 1905 aaKnown RBP6.99□□□□□ -1.29
CHMP3-206ENST00000466032 WDR90Q96KV7 1748 aa6.99□□□□□ -1.29
CHMP3-206ENST00000466032 CNTNAP1P78357 1384 aa6.99□□□□□ -1.29
CHMP3-206ENST00000466032 CYP2D7A0A087X1C5 515 aa6.99□□□□□ -1.29
CHMP3-206ENST00000466032 RRP9O43818 475 aaKnown RBP6.99□□□□□ -1.29
CHMP3-206ENST00000466032 RNF40O75150 1001 aa6.99□□□□□ -1.29
CHMP3-206ENST00000466032 CYP2D6P10635 497 aa6.99□□□□□ -1.29
CHMP3-206ENST00000466032 IFNAR1P17181 557 aa6.99□□□□□ -1.29
CHMP3-206ENST00000466032 SHMT1P34896 483 aa6.99□□□□□ -1.29
CHMP3-206ENST00000466032 USP14P54578 494 aa6.99□□□□□ -1.29
CHMP3-206ENST00000466032 FKBP1BP68106 108 aa6.99□□□□□ -1.29
CHMP3-206ENST00000466032 AKAP17AQ02040 695 aaKnown RBP6.99□□□□□ -1.29
CHMP3-206ENST00000466032 ME3Q16798 604 aa6.99□□□□□ -1.29
CHMP3-206ENST00000466032 ANGEL2Q5VTE6 544 aaKnown RBP6.99□□□□□ -1.29
CHMP3-206ENST00000466032 ZNF654Q8IZM8 581 aa6.99□□□□□ -1.29
CHMP3-206ENST00000466032 FANCBQ8NB91 859 aa6.99□□□□□ -1.29
CHMP3-206ENST00000466032 PNMA1Q8ND90 353 aa6.99□□□□□ -1.29
CHMP3-206ENST00000466032 DYNLL2Q96FJ2 89 aa6.99□□□□□ -1.29
CHMP3-206ENST00000466032 TAF1DQ9H5J8 278 aaPredicted RBP6.99□□□□□ -1.29
CHMP3-206ENST00000466032 GGA3Q9NZ52 723 aa6.99□□□□□ -1.29
CHMP3-206ENST00000466032 PNMA2Q9UL42 364 aa6.99□□□□□ -1.29
CHMP3-206ENST00000466032 STX8Q9UNK0 236 aa6.99□□□□□ -1.29
CHMP3-206ENST00000466032 TAF6LQ9Y6J9 622 aa6.99□□□□□ -1.29
CHMP3-206ENST00000466032 IGKV6D-41A0A0C4DH26 115 aa6.98□□□□□ -1.29
CHMP3-206ENST00000466032 GOLGA8AA7E2F4 631 aa6.98□□□□□ -1.29
CHMP3-206ENST00000466032 GOLGA8BA8MQT2 603 aa6.98□□□□□ -1.29
CHMP3-206ENST00000466032 hCG_1984214I3L0E3 225 aa6.98□□□□□ -1.29
CHMP3-206ENST00000466032 MPHOSPH10O00566 681 aaKnown RBP6.98□□□□□ -1.29
CHMP3-206ENST00000466032 PRDM1O75626 825 aa6.98□□□□□ -1.29
CHMP3-206ENST00000466032 FDX1P10109 184 aa6.98□□□□□ -1.29
CHMP3-206ENST00000466032 CAP2P40123 477 aa6.98□□□□□ -1.29
CHMP3-206ENST00000466032 IREB2P48200 963 aaKnown RBP6.98□□□□□ -1.29
CHMP3-206ENST00000466032 CACNB3P54284 484 aa6.98□□□□□ -1.29
CHMP3-206ENST00000466032 ICA1Q05084 483 aa6.98□□□□□ -1.29
CHMP3-206ENST00000466032 APOBRQ0VD83 1088 aa6.98□□□□□ -1.29
CHMP3-206ENST00000466032 TROAPQ12815 778 aa6.98□□□□□ -1.29
CHMP3-206ENST00000466032 RTN1Q16799 776 aa6.98□□□□□ -1.29
CHMP3-206ENST00000466032 ASPRV1Q53RT3 343 aa6.98□□□□□ -1.29
CHMP3-206ENST00000466032 NOL9Q5SY16 702 aaKnown RBP6.98□□□□□ -1.29
CHMP3-206ENST00000466032 SH3BP5LQ7L8J4 393 aa6.98□□□□□ -1.29
CHMP3-206ENST00000466032 ARMC9Q7Z3E5 817 aa6.98□□□□□ -1.29
CHMP3-206ENST00000466032 LDHDQ86WU2 507 aa6.98□□□□□ -1.29
CHMP3-206ENST00000466032 ZNF713Q8N859 430 aaPredicted RBP6.98□□□□□ -1.29
CHMP3-206ENST00000466032 FAM184AQ8NB25 1140 aa6.98□□□□□ -1.29
CHMP3-206ENST00000466032 GMCL1P1Q8NEA9 526 aa6.98□□□□□ -1.29
CHMP3-206ENST00000466032 TATDN2Q93075 761 aa6.98□□□□□ -1.29
CHMP3-206ENST00000466032 TEPSINQ96N21 525 aa6.98□□□□□ -1.29
CHMP3-206ENST00000466032 SPOCK3Q9BQ16 436 aa6.98□□□□□ -1.29
CHMP3-206ENST00000466032 PRR14Q9BWN1 585 aa6.98□□□□□ -1.29
CHMP3-206ENST00000466032 RNF26Q9BY78 433 aaPredicted RBP6.98□□□□□ -1.29
CHMP3-206ENST00000466032 TMEM39BQ9GZU3 492 aa6.98□□□□□ -1.29
CHMP3-206ENST00000466032 GOPCQ9HD26 462 aa6.98□□□□□ -1.29
CHMP3-206ENST00000466032 ZNF112Q9UJU3 913 aa6.98□□□□□ -1.29
CHMP3-206ENST00000466032 NAP1L2Q9ULW6 460 aaPredicted RBP6.98□□□□□ -1.29
CHMP3-206ENST00000466032 STK36Q9NRP7 1315 aa6.98□□□□□ -1.29
CHMP3-206ENST00000466032 USP17L5A8MUK1 530 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 C19orf81C9J6K1 198 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 PLA2G6O60733 806 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 CD2BP2O95400 341 aaKnown RBP6.97□□□□□ -1.29
CHMP3-206ENST00000466032 DEXIO95424 95 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 ADH1BP00325 375 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 PARP1P09874 1014 aaKnown RBP6.97□□□□□ -1.29
CHMP3-206ENST00000466032 CPA1P15085 419 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 PTMSP20962 102 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 HIRAP54198 1017 aaPredicted RBP6.97□□□□□ -1.29
CHMP3-206ENST00000466032 SSRP1Q08945 709 aaKnown RBP6.97□□□□□ -1.29
CHMP3-206ENST00000466032 MAP3K11Q16584 847 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 FAM47AQ5JRC9 791 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 CHST3Q7LGC8 479 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 KRT26Q7Z3Y9 468 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 CCDC83Q8IWF9 413 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 ZFPM1Q8IX07 1006 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 SNIP1Q8TAD8 396 aaKnown RBP6.97□□□□□ -1.29
CHMP3-206ENST00000466032 SMARCC2Q8TAQ2 1214 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 RBM46Q8TBY0 533 aaKnown RBP6.97□□□□□ -1.29
CHMP3-206ENST00000466032 TRPM4Q8TD43 1214 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 CCDC12Q8WUD4 166 aaPredicted RBP6.97□□□□□ -1.29
CHMP3-206ENST00000466032 DCAF4Q8WV16 495 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 LPAR1Q92633 364 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 CEP95Q96GE4 821 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms