RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 CPXCR1Q8N123 301 aa20.36■□□□□ 0.85
TOM1-213ENST00000465529 GMCL1P1Q8NEA9 526 aa20.36■□□□□ 0.85
TOM1-213ENST00000465529 NBPF3Q9H094 633 aa20.36■□□□□ 0.85
TOM1-213ENST00000465529 C11orf49Q9H6J7 331 aa20.36■□□□□ 0.85
TOM1-213ENST00000465529 ISY1Q9ULR0 285 aaKnown RBP20.36■□□□□ 0.85
TOM1-213ENST00000465529 EVI5O60447 810 aa20.35■□□□□ 0.85
TOM1-213ENST00000465529 RRP12Q5JTH9 1297 aaKnown RBP20.35■□□□□ 0.85
TOM1-213ENST00000465529 OLFML2BQ68BL8 750 aa20.35■□□□□ 0.85
TOM1-213ENST00000465529 ABRAQ8N0Z2 381 aa20.35■□□□□ 0.85
TOM1-213ENST00000465529 MAML3Q96JK9 1138 aa20.35■□□□□ 0.85
TOM1-213ENST00000465529 RAVER2Q9HCJ3 691 aaKnown RBP20.35■□□□□ 0.85
TOM1-213ENST00000465529 TOMM22Q9NS69 142 aa20.35■□□□□ 0.85
TOM1-213ENST00000465529 DDX20Q9UHI6 824 aaKnown RBP20.35■□□□□ 0.85
TOM1-213ENST00000465529 STX8Q9UNK0 236 aa20.35■□□□□ 0.85
TOM1-213ENST00000465529 MTMR7Q9Y216 660 aa20.35■□□□□ 0.85
TOM1-213ENST00000465529 BMP3P12645 472 aa20.34■□□□□ 0.85
TOM1-213ENST00000465529 CAPN2P17655 700 aa20.34■□□□□ 0.85
TOM1-213ENST00000465529 CWC27Q6UX04 472 aaKnown RBP20.34■□□□□ 0.85
TOM1-213ENST00000465529 C7orf61Q8IZ16 206 aa20.34■□□□□ 0.85
TOM1-213ENST00000465529 PRPF38AQ8NAV1 312 aaKnown RBP20.34■□□□□ 0.85
TOM1-213ENST00000465529 LAMA4Q16363 1823 aa20.34■□□□□ 0.85
TOM1-213ENST00000465529 SMCHD1A6NHR9 2005 aa20.33■□□□□ 0.85
TOM1-213ENST00000465529 TMEM232C9JQI7 657 aa20.33■□□□□ 0.85
TOM1-213ENST00000465529 ORC4O43929 436 aa20.33■□□□□ 0.85
TOM1-213ENST00000465529 FGRP09769 529 aa20.33■□□□□ 0.85
TOM1-213ENST00000465529 MCCP23508 829 aa20.33■□□□□ 0.85
TOM1-213ENST00000465529 TBC1D10CQ8IV04 446 aa20.33■□□□□ 0.85
TOM1-213ENST00000465529 TEX13BQ9BXU2 312 aa20.33■□□□□ 0.85
TOM1-213ENST00000465529 SLC38A10Q9HBR0 1119 aa20.33■□□□□ 0.85
TOM1-213ENST00000465529 FEM1BQ9UK73 627 aa20.33■□□□□ 0.85
TOM1-213ENST00000465529 KCTD2Q14681 263 aa20.32■□□□□ 0.84
TOM1-213ENST00000465529 ZNF792Q3KQV3 632 aa20.32■□□□□ 0.84
TOM1-213ENST00000465529 KCTD1Q719H9 257 aa20.32■□□□□ 0.84
TOM1-213ENST00000465529 IL25Q9H293 177 aa20.32■□□□□ 0.84
TOM1-213ENST00000465529 ZMYND8Q9ULU4 1186 aaPredicted RBP20.32■□□□□ 0.84
TOM1-213ENST00000465529 SYNPO2Q9UMS6 1093 aa20.32■□□□□ 0.84
TOM1-213ENST00000465529 NR2E3Q9Y5X4 410 aa20.32■□□□□ 0.84
TOM1-213ENST00000465529 ZMYM6O95789 1325 aa20.31■□□□□ 0.84
TOM1-213ENST00000465529 ZBED4O75132 1171 aa20.31■□□□□ 0.84
TOM1-213ENST00000465529 COL6A1P12109 1028 aa20.31■□□□□ 0.84
TOM1-213ENST00000465529 GSPT1P15170 499 aaKnown RBP20.31■□□□□ 0.84
TOM1-213ENST00000465529 SLC1A4P43007 532 aa20.31■□□□□ 0.84
TOM1-213ENST00000465529 SNAP25P60880 206 aa20.31■□□□□ 0.84
TOM1-213ENST00000465529 DIAPH3Q9NSV4 1193 aa20.31■□□□□ 0.84
TOM1-213ENST00000465529 SLC5A4Q9NY91 659 aa20.31■□□□□ 0.84
TOM1-213ENST00000465529 RBM27Q9P2N5 1060 aaKnown RBP20.31■□□□□ 0.84
TOM1-213ENST00000465529 MCM3APO60318 1980 aa20.31■□□□□ 0.84
TOM1-213ENST00000465529 NEDD4P46934 1319 aa20.3■□□□□ 0.84
TOM1-213ENST00000465529 TRIOBPQ9H2D6 2365 aa20.3■□□□□ 0.84
TOM1-213ENST00000465529 TAL1P17542 331 aaPredicted RBP20.3■□□□□ 0.84
TOM1-213ENST00000465529 TICAM2Q86XR7 235 aa20.3■□□□□ 0.84
TOM1-213ENST00000465529 GMCL1Q96IK5 515 aa20.3■□□□□ 0.84
TOM1-213ENST00000465529 CTDP1Q9Y5B0 961 aaPredicted RBP20.3■□□□□ 0.84
TOM1-213ENST00000465529 ATP2A1O14983 1001 aa20.29■□□□□ 0.84
TOM1-213ENST00000465529 SYN1P17600 705 aa20.29■□□□□ 0.84
TOM1-213ENST00000465529 COPB2P35606 906 aa20.29■□□□□ 0.84
TOM1-213ENST00000465529 NOVP48745 357 aa20.29■□□□□ 0.84
TOM1-213ENST00000465529 STAT2P52630 851 aa20.29■□□□□ 0.84
TOM1-213ENST00000465529 IKQ13123 557 aaPredicted RBP20.29■□□□□ 0.84
TOM1-213ENST00000465529 LRRC26Q2I0M4 334 aa20.29■□□□□ 0.84
TOM1-213ENST00000465529 GJC2Q5T442 439 aaPredicted RBP20.29■□□□□ 0.84
TOM1-213ENST00000465529 HOMER2Q9NSB8 354 aa20.29■□□□□ 0.84
TOM1-213ENST00000465529 ZNF536O15090 1300 aa20.28■□□□□ 0.84
TOM1-213ENST00000465529 SEPT4O43236 478 aa20.28■□□□□ 0.84
TOM1-213ENST00000465529 AKNAD1Q5T1N1 836 aa20.28■□□□□ 0.84
TOM1-213ENST00000465529 TTBK2Q6IQ55 1244 aa20.28■□□□□ 0.84
TOM1-213ENST00000465529 STAG1Q8WVM7 1258 aa20.28■□□□□ 0.84
TOM1-213ENST00000465529 LENG1Q96BZ8 264 aaPredicted RBP20.28■□□□□ 0.84
TOM1-213ENST00000465529 AGBL1Q96MI9 1066 aa20.28■□□□□ 0.84
TOM1-213ENST00000465529 TMEM47Q9BQJ4 181 aa20.28■□□□□ 0.84
TOM1-213ENST00000465529 TINF2Q9BSI4 451 aa20.28■□□□□ 0.84
TOM1-213ENST00000465529 PRO3102Q9H379 93 aa20.28■□□□□ 0.84
TOM1-213ENST00000465529 MSCO60682 206 aa20.27■□□□□ 0.84
TOM1-213ENST00000465529 MYCNP04198 464 aaPredicted RBP20.27■□□□□ 0.84
TOM1-213ENST00000465529 FXR1P51114 621 aaKnown RBP eCLIP20.27■□□□□ 0.84
TOM1-213ENST00000465529 CCDC96Q2M329 555 aa20.27■□□□□ 0.84
TOM1-213ENST00000465529 TTC22Q5TAA0 569 aa20.27■□□□□ 0.84
TOM1-213ENST00000465529 RCSD1Q6JBY9 416 aa20.27■□□□□ 0.84
TOM1-213ENST00000465529 CCDC174Q6PII3 467 aa20.27■□□□□ 0.84
TOM1-213ENST00000465529 DDX11Q96FC9 970 aa20.27■□□□□ 0.84
TOM1-213ENST00000465529 FGD4Q96M96 766 aa20.27■□□□□ 0.84
TOM1-213ENST00000465529 SENP6Q9GZR1 1112 aaPredicted RBP20.27■□□□□ 0.84
TOM1-213ENST00000465529 RANBP2P49792 3224 aaKnown RBP20.27■□□□□ 0.84
TOM1-213ENST00000465529 FRMPD2Q68DX3 1309 aaPredicted RBP20.27■□□□□ 0.83
TOM1-213ENST00000465529 DNAJC25-GNG10A0A024R161 153 aa20.26■□□□□ 0.83
TOM1-213ENST00000465529 SLC16A2P36021 539 aa20.26■□□□□ 0.83
TOM1-213ENST00000465529 ATN1P54259 1190 aaPredicted RBP20.26■□□□□ 0.83
TOM1-213ENST00000465529 MFAP1P55081 439 aaKnown RBP20.26■□□□□ 0.83
TOM1-213ENST00000465529 MFSD6Q6ZSS7 791 aa20.26■□□□□ 0.83
TOM1-213ENST00000465529 FAM160B2Q86V87 743 aa20.26■□□□□ 0.83
TOM1-213ENST00000465529 ZKSCAN3Q9BRR0 538 aa20.26■□□□□ 0.83
TOM1-213ENST00000465529 PRR12Q9ULL5 1215 aa20.26■□□□□ 0.83
TOM1-213ENST00000465529 DIS3Q9Y2L1 958 aaKnown RBP20.26■□□□□ 0.83
TOM1-213ENST00000465529 DNAH12Q6ZR08 3092 aa20.25■□□□□ 0.83
TOM1-213ENST00000465529 LCTP09848 1927 aa20.25■□□□□ 0.83
TOM1-213ENST00000465529 ZNF865P0CJ78 1059 aaPredicted RBP20.25■□□□□ 0.83
TOM1-213ENST00000465529 OAZ1P54368 228 aa20.25■□□□□ 0.83
TOM1-213ENST00000465529 PPP4R3BQ5MIZ7 849 aa20.25■□□□□ 0.83
TOM1-213ENST00000465529 CHURC1Q8WUH1 139 aa20.25■□□□□ 0.83
TOM1-213ENST00000465529 TCP11L1Q9NUJ3 509 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms