RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 USP17L19D6RCP7 530 aa16.26■□□□□ 0.19
HDAC6-215ENST00000465457 USP17L20D6RJB6 530 aa16.26■□□□□ 0.19
HDAC6-215ENST00000465457 IGSF3O75054 1194 aa16.26■□□□□ 0.19
HDAC6-215ENST00000465457 COBLO75128 1261 aa16.26■□□□□ 0.19
HDAC6-215ENST00000465457 HMGB1P09429 215 aaKnown RBP16.26■□□□□ 0.19
HDAC6-215ENST00000465457 CASTP20810 708 aaKnown RBP16.26■□□□□ 0.19
HDAC6-215ENST00000465457 ADORA2AP29274 412 aa16.26■□□□□ 0.19
HDAC6-215ENST00000465457 PBX2P40425 430 aa16.26■□□□□ 0.19
HDAC6-215ENST00000465457 USP17L24Q0WX57 530 aa16.26■□□□□ 0.19
HDAC6-215ENST00000465457 NBR1Q14596 966 aa16.26■□□□□ 0.19
HDAC6-215ENST00000465457 UBE3CQ15386 1083 aa16.26■□□□□ 0.19
HDAC6-215ENST00000465457 TMED8Q6PL24 325 aaPredicted RBP16.26■□□□□ 0.19
HDAC6-215ENST00000465457 CATSPERGQ6ZRH7 1159 aa16.26■□□□□ 0.19
HDAC6-215ENST00000465457 RASEFQ8IZ41 740 aa16.26■□□□□ 0.19
HDAC6-215ENST00000465457 SPRYD3Q8NCJ5 442 aa16.26■□□□□ 0.19
HDAC6-215ENST00000465457 ARRDC4Q8NCT1 418 aa16.26■□□□□ 0.19
HDAC6-215ENST00000465457 FAM122AQ96E09 287 aa16.26■□□□□ 0.19
HDAC6-215ENST00000465457 TMX3Q96JJ7 454 aa16.26■□□□□ 0.19
HDAC6-215ENST00000465457 JAKMIP1Q96N16 626 aaKnown RBP16.26■□□□□ 0.19
HDAC6-215ENST00000465457 TTC14Q96N46 770 aa16.26■□□□□ 0.19
HDAC6-215ENST00000465457 ALDH8A1Q9H2A2 487 aaPredicted RBP16.26■□□□□ 0.19
HDAC6-215ENST00000465457 MYH7P12883 1935 aa16.25■□□□□ 0.19
HDAC6-215ENST00000465457 NAV1Q8NEY1 1877 aa16.25■□□□□ 0.19
HDAC6-215ENST00000465457 GRXCR1A8MXD5 290 aa16.25■□□□□ 0.19
HDAC6-215ENST00000465457 SEPT4O43236 478 aa16.25■□□□□ 0.19
HDAC6-215ENST00000465457 CLTBP09497 229 aa16.25■□□□□ 0.19
HDAC6-215ENST00000465457 PTMSP20962 102 aa16.25■□□□□ 0.19
HDAC6-215ENST00000465457 MAP3K12Q12852 859 aa16.25■□□□□ 0.19
HDAC6-215ENST00000465457 RUFY3Q7L099 469 aa16.25■□□□□ 0.19
HDAC6-215ENST00000465457 LENG1Q96BZ8 264 aaPredicted RBP16.25■□□□□ 0.19
HDAC6-215ENST00000465457 TIFAQ96CG3 184 aa16.25■□□□□ 0.19
HDAC6-215ENST00000465457 TRIM34Q9BYJ4 488 aa16.25■□□□□ 0.19
HDAC6-215ENST00000465457 UPF3BQ9BZI7 483 aaKnown RBP16.25■□□□□ 0.19
HDAC6-215ENST00000465457 PRDM12Q9H4Q4 367 aa16.25■□□□□ 0.19
HDAC6-215ENST00000465457 SH2B1Q9NRF2 756 aaPredicted RBP16.25■□□□□ 0.19
HDAC6-215ENST00000465457 LRP2BPQ9P2M1 347 aa16.25■□□□□ 0.19
HDAC6-215ENST00000465457 LIMCH1Q9UPQ0 1083 aa16.25■□□□□ 0.19
HDAC6-215ENST00000465457 PQBP1O60828 265 aaKnown RBP16.24■□□□□ 0.19
HDAC6-215ENST00000465457 ADD2P35612 726 aa16.24■□□□□ 0.19
HDAC6-215ENST00000465457 DYNLL1P63167 89 aaKnown RBP16.24■□□□□ 0.19
HDAC6-215ENST00000465457 ADGRE1Q14246 886 aa16.24■□□□□ 0.19
HDAC6-215ENST00000465457 RAB3GAP1Q15042 981 aa16.24■□□□□ 0.19
HDAC6-215ENST00000465457 C1orf53Q5VUE5 145 aa16.24■□□□□ 0.19
HDAC6-215ENST00000465457 BLOC1S2Q6QNY1 142 aa16.24■□□□□ 0.19
HDAC6-215ENST00000465457 LBX2Q6XYB7 198 aa16.24■□□□□ 0.19
HDAC6-215ENST00000465457 GBP4Q96PP9 640 aa16.24■□□□□ 0.19
HDAC6-215ENST00000465457 ASB2Q96Q27 587 aa16.24■□□□□ 0.19
HDAC6-215ENST00000465457 MOV10L1Q9BXT6 1211 aaKnown RBP16.24■□□□□ 0.19
HDAC6-215ENST00000465457 RPAP3Q9H6T3 665 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-215ENST00000465457 PDRG1Q9NUG6 133 aa16.24■□□□□ 0.19
HDAC6-215ENST00000465457 THEGQ9P2T0 379 aa16.24■□□□□ 0.19
HDAC6-215ENST00000465457 CYP2E1P05181 493 aaPredicted RBP16.23■□□□□ 0.19
HDAC6-215ENST00000465457 HOXD11P31277 338 aaPredicted RBP16.23■□□□□ 0.19
HDAC6-215ENST00000465457 FPGSQ05932 587 aa16.23■□□□□ 0.19
HDAC6-215ENST00000465457 CCDC85BQ15834 202 aaPredicted RBP16.23■□□□□ 0.19
HDAC6-215ENST00000465457 OLFML2BQ68BL8 750 aa16.23■□□□□ 0.19
HDAC6-215ENST00000465457 NAA16Q6N069 864 aaPredicted RBP16.23■□□□□ 0.19
HDAC6-215ENST00000465457 DPP9Q86TI2 863 aa16.23■□□□□ 0.19
HDAC6-215ENST00000465457 FOXP4Q8IVH2 680 aaPredicted RBP16.23■□□□□ 0.19
HDAC6-215ENST00000465457 UHRF1Q96T88 793 aaPredicted RBP16.23■□□□□ 0.19
HDAC6-215ENST00000465457 PHF24Q9UPV7 400 aa16.23■□□□□ 0.19
HDAC6-215ENST00000465457 MYH8P13535 1937 aa16.23■□□□□ 0.19
HDAC6-215ENST00000465457 KIAA0355O15063 1070 aa16.22■□□□□ 0.19
HDAC6-215ENST00000465457 PGK1P00558 417 aa16.22■□□□□ 0.19
HDAC6-215ENST00000465457 HSPD1P10809 573 aaKnown RBP16.22■□□□□ 0.19
HDAC6-215ENST00000465457 RAG1P15918 1043 aa16.22■□□□□ 0.19
HDAC6-215ENST00000465457 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.22■□□□□ 0.195e-8■■■□□ 16.3
HDAC6-215ENST00000465457 NOL10Q9BSC4 688 aaKnown RBP16.22■□□□□ 0.19
HDAC6-215ENST00000465457 PBX4Q9BYU1 374 aa16.22■□□□□ 0.19
HDAC6-215ENST00000465457 GINM1Q9NU53 330 aa16.22■□□□□ 0.19
HDAC6-215ENST00000465457 MCM3APO60318 1980 aa16.21■□□□□ 0.19
HDAC6-215ENST00000465457 A0A1W2PQ45 241 aaPredicted RBP16.21■□□□□ 0.19
HDAC6-215ENST00000465457 A0A1W2PQY0 241 aa16.21■□□□□ 0.19
HDAC6-215ENST00000465457 DDX11L8A8MPP1 907 aa16.21■□□□□ 0.19
HDAC6-215ENST00000465457 PDIA4P13667 645 aaKnown RBP16.21■□□□□ 0.19
HDAC6-215ENST00000465457 ERCC3P19447 782 aa16.21■□□□□ 0.19
HDAC6-215ENST00000465457 RPS6KB1P23443 525 aa16.21■□□□□ 0.19
HDAC6-215ENST00000465457 GUCY1A2P33402 732 aa16.21■□□□□ 0.19
HDAC6-215ENST00000465457 AK2P54819 239 aa16.21■□□□□ 0.19
HDAC6-215ENST00000465457 PPP4CP60510 307 aa16.21■□□□□ 0.19
HDAC6-215ENST00000465457 EVX2Q03828 476 aa16.21■□□□□ 0.19
HDAC6-215ENST00000465457 SLC9C2Q5TAH2 1124 aa16.21■□□□□ 0.19
HDAC6-215ENST00000465457 TATDN1Q6P1N9 297 aa16.21■□□□□ 0.19
HDAC6-215ENST00000465457 CCDC129Q6ZRS4 1044 aa16.21■□□□□ 0.19
HDAC6-215ENST00000465457 ATXN2LQ8WWM7 1075 aaKnown RBP16.21■□□□□ 0.19
HDAC6-215ENST00000465457 OSBP2Q969R2 916 aa16.21■□□□□ 0.19
HDAC6-215ENST00000465457 SEC62Q99442 399 aaKnown RBP16.21■□□□□ 0.19
HDAC6-215ENST00000465457 KIAA1683Q9H0B3 1180 aa16.21■□□□□ 0.19
HDAC6-215ENST00000465457 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.21■□□□□ 0.19
HDAC6-215ENST00000465457 TACC3Q9Y6A5 838 aa16.21■□□□□ 0.19
HDAC6-215ENST00000465457 ZMYM6O95789 1325 aa16.2■□□□□ 0.18
HDAC6-215ENST00000465457 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-215ENST00000465457 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-215ENST00000465457 M0R2C6 588 aa16.2■□□□□ 0.18
HDAC6-215ENST00000465457 IDH1O75874 414 aaKnown RBP16.2■□□□□ 0.18
HDAC6-215ENST00000465457 PDE6AP16499 860 aa16.2■□□□□ 0.18
HDAC6-215ENST00000465457 TAL1P17542 331 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-215ENST00000465457 FAAP100Q0VG06 881 aa16.2■□□□□ 0.18
HDAC6-215ENST00000465457 ADCK5Q3MIX3 580 aa16.2■□□□□ 0.18
HDAC6-215ENST00000465457 KIAA1755Q5JYT7 1200 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms