RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 CYP4F22Q6NT55 531 aa19.62■□□□□ 0.73
EXOSC3-203ENST00000465229 GPAT2Q6NUI2 795 aa19.62■□□□□ 0.73
EXOSC3-203ENST00000465229 BTNL9Q6UXG8 535 aa19.62■□□□□ 0.73
EXOSC3-203ENST00000465229 BRI3BPQ8WY22 251 aa19.62■□□□□ 0.73
EXOSC3-203ENST00000465229 LZTS2Q9BRK4 669 aa19.62■□□□□ 0.73
EXOSC3-203ENST00000465229 CCL15-CCL14A0A0B4J2E2 113 aa19.61■□□□□ 0.73
EXOSC3-203ENST00000465229 CYTH3O43739 400 aa19.61■□□□□ 0.73
EXOSC3-203ENST00000465229 PLA2G6O60733 806 aa19.61■□□□□ 0.73
EXOSC3-203ENST00000465229 PPFIA3O75145 1194 aa19.61■□□□□ 0.73
EXOSC3-203ENST00000465229 IFNAR1P17181 557 aa19.61■□□□□ 0.73
EXOSC3-203ENST00000465229 CCL15Q16663 113 aa19.61■□□□□ 0.73
EXOSC3-203ENST00000465229 CATSPERGQ6ZRH7 1159 aa19.61■□□□□ 0.73
EXOSC3-203ENST00000465229 PAXIP1Q6ZW49 1069 aaPredicted RBP19.61■□□□□ 0.73
EXOSC3-203ENST00000465229 FBXO28Q9NVF7 368 aa19.61■□□□□ 0.73
EXOSC3-203ENST00000465229 FEM1BQ9UK73 627 aa19.61■□□□□ 0.73
EXOSC3-203ENST00000465229 AGTPBP1Q9UPW5 1226 aa19.61■□□□□ 0.73
EXOSC3-203ENST00000465229 SMC3Q9UQE7 1217 aa19.61■□□□□ 0.73
EXOSC3-203ENST00000465229 BAZ2BQ9UIF8 2168 aaKnown RBP19.6■□□□□ 0.73
EXOSC3-203ENST00000465229 PTPRFP10586 1907 aa19.6■□□□□ 0.73
EXOSC3-203ENST00000465229 USP17L15C9J2P7 530 aa19.6■□□□□ 0.73
EXOSC3-203ENST00000465229 USP17L13C9JLJ4 530 aa19.6■□□□□ 0.73
EXOSC3-203ENST00000465229 USP17L11C9JVI0 530 aa19.6■□□□□ 0.73
EXOSC3-203ENST00000465229 USP17L18D6R9N7 530 aa19.6■□□□□ 0.73
EXOSC3-203ENST00000465229 USP17L22D6RA61 530 aa19.6■□□□□ 0.73
EXOSC3-203ENST00000465229 USP17L17D6RBQ6 530 aa19.6■□□□□ 0.73
EXOSC3-203ENST00000465229 USP17L19D6RCP7 530 aa19.6■□□□□ 0.73
EXOSC3-203ENST00000465229 USP17L20D6RJB6 530 aa19.6■□□□□ 0.73
EXOSC3-203ENST00000465229 SMARCA1P28370 1054 aa19.6■□□□□ 0.73
EXOSC3-203ENST00000465229 HOXA7P31268 230 aaPredicted RBP19.6■□□□□ 0.73
EXOSC3-203ENST00000465229 STAT2P52630 851 aa19.6■□□□□ 0.73
EXOSC3-203ENST00000465229 USP17L24Q0WX57 530 aa19.6■□□□□ 0.73
EXOSC3-203ENST00000465229 CPLX2Q6PUV4 134 aaKnown RBP19.6■□□□□ 0.73
EXOSC3-203ENST00000465229 NSUN7Q8NE18 718 aaKnown RBP19.6■□□□□ 0.73
EXOSC3-203ENST00000465229 CHURC1Q8WUH1 139 aa19.6■□□□□ 0.73
EXOSC3-203ENST00000465229 LLPHQ9BRT6 129 aaKnown RBP19.6■□□□□ 0.73
EXOSC3-203ENST00000465229 TANGO6Q9C0B7 1094 aa19.6■□□□□ 0.73
EXOSC3-203ENST00000465229 RIOX1Q9H6W3 641 aa19.6■□□□□ 0.73
EXOSC3-203ENST00000465229 TESPA1A2RU30 521 aaPredicted RBP19.59■□□□□ 0.73
EXOSC3-203ENST00000465229 JAK2O60674 1132 aa19.59■□□□□ 0.73
EXOSC3-203ENST00000465229 HTRA3P83110 453 aa19.59■□□□□ 0.73
EXOSC3-203ENST00000465229 IKQ13123 557 aaPredicted RBP19.59■□□□□ 0.73
EXOSC3-203ENST00000465229 ADGRF4Q8IZF3 695 aa19.59■□□□□ 0.73
EXOSC3-203ENST00000465229 PHKBQ93100 1093 aa19.59■□□□□ 0.73
EXOSC3-203ENST00000465229 PTPN18Q99952 460 aa19.59■□□□□ 0.73
EXOSC3-203ENST00000465229 SPZ1Q9BXG8 430 aa19.59■□□□□ 0.73
EXOSC3-203ENST00000465229 VAT1LQ9HCJ6 419 aa19.59■□□□□ 0.73
EXOSC3-203ENST00000465229 MANSC4A6NHS7 340 aaPredicted RBP19.58■□□□□ 0.73
EXOSC3-203ENST00000465229 FLOT1O75955 427 aa19.58■□□□□ 0.73
EXOSC3-203ENST00000465229 GRM1Q13255 1194 aa19.58■□□□□ 0.73
EXOSC3-203ENST00000465229 KLHL40Q2TBA0 621 aa19.58■□□□□ 0.73
EXOSC3-203ENST00000465229 SYDE2Q5VT97 1194 aa19.58■□□□□ 0.73
EXOSC3-203ENST00000465229 FAM160B2Q86V87 743 aa19.58■□□□□ 0.73
EXOSC3-203ENST00000465229 ZIC5Q96T25 663 aa19.58■□□□□ 0.73
EXOSC3-203ENST00000465229 JMJD4Q9H9V9 463 aa19.58■□□□□ 0.73
EXOSC3-203ENST00000465229 V9GY48 417 aaPredicted RBP19.58■□□□□ 0.73
EXOSC3-203ENST00000465229 CNTNAP5Q8WYK1 1306 aa19.58■□□□□ 0.72
EXOSC3-203ENST00000465229 BTBD19C9JJ37 291 aa19.58■□□□□ 0.72
EXOSC3-203ENST00000465229 CDKL5O76039 1030 aa19.58■□□□□ 0.72
EXOSC3-203ENST00000465229 MCTP1Q6DN14 999 aa19.58■□□□□ 0.72
EXOSC3-203ENST00000465229 PRPF38AQ8NAV1 312 aaKnown RBP19.58■□□□□ 0.72
EXOSC3-203ENST00000465229 SMARCC2Q8TAQ2 1214 aa19.58■□□□□ 0.72
EXOSC3-203ENST00000465229 KIFC2Q96AC6 838 aa19.58■□□□□ 0.72
EXOSC3-203ENST00000465229 CAPNS2Q96L46 248 aa19.58■□□□□ 0.72
EXOSC3-203ENST00000465229 SLF1Q9BQI6 1058 aa19.58■□□□□ 0.72
EXOSC3-203ENST00000465229 LMBRD1Q9NUN5 540 aa19.58■□□□□ 0.72
EXOSC3-203ENST00000465229 PRR12Q9ULL5 1215 aa19.58■□□□□ 0.72
EXOSC3-203ENST00000465229 hCG_1642624A0A1W2PR95 340 aa19.57■□□□□ 0.72
EXOSC3-203ENST00000465229 PTPDC1A2A3K4 754 aa19.57■□□□□ 0.72
EXOSC3-203ENST00000465229 C1QTNF8P60827 252 aa19.57■□□□□ 0.72
EXOSC3-203ENST00000465229 COG2Q14746 738 aa19.57■□□□□ 0.72
EXOSC3-203ENST00000465229 SLC26A6Q9BXS9 759 aa19.57■□□□□ 0.72
EXOSC3-203ENST00000465229 PPP1R9AQ9ULJ8 1098 aa19.57■□□□□ 0.72
EXOSC3-203ENST00000465229 PRPF3O43395 683 aaKnown RBP19.56■□□□□ 0.72
EXOSC3-203ENST00000465229 FMNL1O95466 1100 aaPredicted RBP19.56■□□□□ 0.72
EXOSC3-203ENST00000465229 FDPSP14324 419 aaKnown RBP19.56■□□□□ 0.72
EXOSC3-203ENST00000465229 INHBEP58166 350 aa19.56■□□□□ 0.72
EXOSC3-203ENST00000465229 SSRP1Q08945 709 aaKnown RBP19.56■□□□□ 0.72
EXOSC3-203ENST00000465229 NOGQ13253 232 aa19.56■□□□□ 0.72
EXOSC3-203ENST00000465229 SAMD1Q6SPF0 538 aaPredicted RBP19.56■□□□□ 0.72
EXOSC3-203ENST00000465229 ANKRD23Q86SG2 305 aa19.56■□□□□ 0.72
EXOSC3-203ENST00000465229 FAM43AQ8N2R8 423 aa19.56■□□□□ 0.72
EXOSC3-203ENST00000465229 PIBF1Q8WXW3 757 aa19.56■□□□□ 0.72
EXOSC3-203ENST00000465229 MTMR8Q96EF0 704 aa19.56■□□□□ 0.72
EXOSC3-203ENST00000465229 DDX11Q96FC9 970 aa19.56■□□□□ 0.72
EXOSC3-203ENST00000465229 RNF26Q9BY78 433 aaPredicted RBP19.56■□□□□ 0.72
EXOSC3-203ENST00000465229 ASCC2Q9H1I8 757 aaPredicted RBP19.56■□□□□ 0.72
EXOSC3-203ENST00000465229 HOXC10Q9NYD6 342 aa19.56■□□□□ 0.72
EXOSC3-203ENST00000465229 STX6O43752 255 aa19.55■□□□□ 0.72
EXOSC3-203ENST00000465229 DSG3P32926 999 aa19.55■□□□□ 0.72
EXOSC3-203ENST00000465229 KIF23Q02241 960 aaPredicted RBP19.55■□□□□ 0.72
EXOSC3-203ENST00000465229 PABPC4Q13310 644 aaKnown RBP eCLIP19.55■□□□□ 0.721e-12■□□□□ 9.3
EXOSC3-203ENST00000465229 PIGSQ96S52 555 aa19.55■□□□□ 0.72
EXOSC3-203ENST00000465229 P2RX7Q99572 595 aaKnown RBP19.55■□□□□ 0.72
EXOSC3-203ENST00000465229 SLC45A1Q9Y2W3 748 aa19.55■□□□□ 0.72
EXOSC3-203ENST00000465229 LOC285556D6RIA3 1793 aa19.55■□□□□ 0.72
EXOSC3-203ENST00000465229 PDHXO00330 501 aa19.54■□□□□ 0.72
EXOSC3-203ENST00000465229 AOC2O75106 756 aa19.54■□□□□ 0.72
EXOSC3-203ENST00000465229 ZSCAN22P10073 491 aaPredicted RBP19.54■□□□□ 0.72
EXOSC3-203ENST00000465229 SYT1P21579 422 aa19.54■□□□□ 0.72
EXOSC3-203ENST00000465229 GJB2P29033 226 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms