RNA–Protein interactions for RNA: ENST00000464576.1

PTPN18-209, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 5

Gene PTPN18, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-209ENST00000464576 KIFC2Q96AC6 838 aa11.26□□□□□ -0.61
PTPN18-209ENST00000464576 NUP88Q99567 741 aaPredicted RBP11.26□□□□□ -0.61
PTPN18-209ENST00000464576 NYAP2Q9P242 653 aa11.26□□□□□ -0.61
PTPN18-209ENST00000464576 ZHX1Q9UKY1 873 aaPredicted RBP11.26□□□□□ -0.61
PTPN18-209ENST00000464576 FAM184BQ9ULE4 1060 aa11.26□□□□□ -0.61
PTPN18-209ENST00000464576 ADAMTS5Q9UNA0 930 aa11.26□□□□□ -0.61
PTPN18-209ENST00000464576 GSG1L2A8MUP6 293 aa11.25□□□□□ -0.61
PTPN18-209ENST00000464576 SMIM22K7EJ46 135 aa11.25□□□□□ -0.61
PTPN18-209ENST00000464576 ERC2O15083 957 aa11.25□□□□□ -0.61
PTPN18-209ENST00000464576 IGHA2P01877 340 aa11.25□□□□□ -0.61
PTPN18-209ENST00000464576 TSPY3P0CV98 308 aa11.25□□□□□ -0.61
PTPN18-209ENST00000464576 TSPY8P0CW00 308 aa11.25□□□□□ -0.61
PTPN18-209ENST00000464576 SHHQ15465 462 aa11.25□□□□□ -0.61
PTPN18-209ENST00000464576 ZNF792Q3KQV3 632 aa11.25□□□□□ -0.61
PTPN18-209ENST00000464576 MSL3Q8N5Y2 521 aaKnown RBP11.25□□□□□ -0.61
PTPN18-209ENST00000464576 STARD7Q9NQZ5 370 aa11.25□□□□□ -0.61
PTPN18-209ENST00000464576 TMEM39AQ9NV64 488 aa11.25□□□□□ -0.61
PTPN18-209ENST00000464576 FBXO40Q9UH90 709 aa11.25□□□□□ -0.61
PTPN18-209ENST00000464576 ZNF214Q9UL59 606 aaPredicted RBP11.25□□□□□ -0.61
PTPN18-209ENST00000464576 PHF24Q9UPV7 400 aa11.25□□□□□ -0.61
PTPN18-209ENST00000464576 LTBP2Q14767 1821 aa11.25□□□□□ -0.61
PTPN18-209ENST00000464576 A0A1W2PQ45 241 aaPredicted RBP11.24□□□□□ -0.61
PTPN18-209ENST00000464576 A0A1W2PQY0 241 aa11.24□□□□□ -0.61
PTPN18-209ENST00000464576 PATL2C9JE40 543 aaKnown RBP11.24□□□□□ -0.61
PTPN18-209ENST00000464576 POTEB2H3BUK9 544 aa11.24□□□□□ -0.61
PTPN18-209ENST00000464576 GPAA1O43292 621 aa11.24□□□□□ -0.61
PTPN18-209ENST00000464576 PRDM1O75626 825 aa11.24□□□□□ -0.61
PTPN18-209ENST00000464576 TTLL1O95922 423 aa11.24□□□□□ -0.61
PTPN18-209ENST00000464576 NDUFB10O96000 172 aa11.24□□□□□ -0.61
PTPN18-209ENST00000464576 RASA1P20936 1047 aa11.24□□□□□ -0.61
PTPN18-209ENST00000464576 SNX17Q15036 470 aa11.24□□□□□ -0.61
PTPN18-209ENST00000464576 PPP4R3BQ5MIZ7 849 aa11.24□□□□□ -0.61
PTPN18-209ENST00000464576 C20orf194Q5TEA3 1177 aa11.24□□□□□ -0.61
PTPN18-209ENST00000464576 C1orf53Q5VUE5 145 aa11.24□□□□□ -0.61
PTPN18-209ENST00000464576 NOL8Q76FK4 1167 aaKnown RBP11.24□□□□□ -0.61
PTPN18-209ENST00000464576 PCSK9Q8NBP7 692 aaKnown RBP11.24□□□□□ -0.61
PTPN18-209ENST00000464576 TSEN34Q9BSV6 310 aaKnown RBP11.24□□□□□ -0.61
PTPN18-209ENST00000464576 NAPBQ9H115 298 aa11.24□□□□□ -0.61
PTPN18-209ENST00000464576 PDLIM7Q9NR12 457 aa11.24□□□□□ -0.61
PTPN18-209ENST00000464576 FEM1BQ9UK73 627 aa11.24□□□□□ -0.61
PTPN18-209ENST00000464576 SYNGAP1Q96PV0 1343 aa11.24□□□□□ -0.61
PTPN18-209ENST00000464576 TRIM43BA6NCK2 446 aa11.23□□□□□ -0.61
PTPN18-209ENST00000464576 C6orf222P0C671 652 aaPredicted RBP11.23□□□□□ -0.61
PTPN18-209ENST00000464576 FDX1P10109 184 aa11.23□□□□□ -0.61
PTPN18-209ENST00000464576 BMP3P12645 472 aa11.23□□□□□ -0.61
PTPN18-209ENST00000464576 TAL1P17542 331 aaPredicted RBP11.23□□□□□ -0.61
PTPN18-209ENST00000464576 ACLYP53396 1101 aa11.23□□□□□ -0.61
PTPN18-209ENST00000464576 FPGSQ05932 587 aa11.23□□□□□ -0.61
PTPN18-209ENST00000464576 TSHZ3Q63HK5 1081 aa11.23□□□□□ -0.61
PTPN18-209ENST00000464576 CCDC174Q6PII3 467 aa11.23□□□□□ -0.61
PTPN18-209ENST00000464576 SH3RF1Q7Z6J0 888 aa11.23□□□□□ -0.61
PTPN18-209ENST00000464576 CHST13Q8NET6 341 aa11.23□□□□□ -0.61
PTPN18-209ENST00000464576 OSBP2Q969R2 916 aa11.23□□□□□ -0.61
PTPN18-209ENST00000464576 TRIM43Q96BQ3 446 aaPredicted RBP11.23□□□□□ -0.61
PTPN18-209ENST00000464576 CEP95Q96GE4 821 aa11.23□□□□□ -0.61
PTPN18-209ENST00000464576 RNPC3Q96LT9 517 aaKnown RBP11.23□□□□□ -0.61
PTPN18-209ENST00000464576 GLT1D1Q96MS3 346 aa11.23□□□□□ -0.61
PTPN18-209ENST00000464576 FSD1Q9BTV5 496 aa11.23□□□□□ -0.61
PTPN18-209ENST00000464576 DCTPP1Q9H773 170 aa11.23□□□□□ -0.61
PTPN18-209ENST00000464576 RAVER2Q9HCJ3 691 aaKnown RBP11.23□□□□□ -0.61
PTPN18-209ENST00000464576 HOMER2Q9NSB8 354 aa11.23□□□□□ -0.61
PTPN18-209ENST00000464576 MROH7Q68CQ1 1323 aa11.23□□□□□ -0.61
PTPN18-209ENST00000464576 MOXD2PA6NHM9 499 aa11.22□□□□□ -0.61
PTPN18-209ENST00000464576 DUSP11O75319 330 aaKnown RBP11.22□□□□□ -0.61
PTPN18-209ENST00000464576 ZNF865P0CJ78 1059 aaPredicted RBP11.22□□□□□ -0.61
PTPN18-209ENST00000464576 SMAD3P84022 425 aaKnown RBP11.22□□□□□ -0.61
PTPN18-209ENST00000464576 ACVR2BQ13705 512 aa11.22□□□□□ -0.61
PTPN18-209ENST00000464576 KCNA10Q16322 511 aa11.22□□□□□ -0.61
PTPN18-209ENST00000464576 C9orf50Q5SZB4 431 aa11.22□□□□□ -0.61
PTPN18-209ENST00000464576 SLFN13Q68D06 897 aa11.22□□□□□ -0.61
PTPN18-209ENST00000464576 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.22□□□□□ -0.61
PTPN18-209ENST00000464576 IFNL3Q8IZI9 196 aa11.22□□□□□ -0.61
PTPN18-209ENST00000464576 LRRC47Q8N1G4 583 aaKnown RBP11.22□□□□□ -0.61
PTPN18-209ENST00000464576 REPS2Q8NFH8 660 aa11.22□□□□□ -0.61
PTPN18-209ENST00000464576 CHURC1Q8WUH1 139 aa11.22□□□□□ -0.61
PTPN18-209ENST00000464576 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.22□□□□□ -0.61
PTPN18-209ENST00000464576 SEMA6BQ9H3T3 888 aa11.22□□□□□ -0.61
PTPN18-209ENST00000464576 ABHD16BQ9H3Z7 469 aa11.22□□□□□ -0.61
PTPN18-209ENST00000464576 MTMR4Q9NYA4 1195 aa11.22□□□□□ -0.61
PTPN18-209ENST00000464576 SYNPO2Q9UMS6 1093 aa11.22□□□□□ -0.61
PTPN18-209ENST00000464576 MCM3APO60318 1980 aa11.21□□□□□ -0.61
PTPN18-209ENST00000464576 GREB1LQ9C091 1923 aaPredicted RBP11.21□□□□□ -0.61
PTPN18-209ENST00000464576 ROBO3Q96MS0 1386 aa11.21□□□□□ -0.61
PTPN18-209ENST00000464576 TTC41PQ6P2S7 1318 aa11.21□□□□□ -0.61
PTPN18-209ENST00000464576 SYNRGQ9UMZ2 1314 aa11.21□□□□□ -0.61
PTPN18-209ENST00000464576 TMEM232C9JQI7 657 aa11.21□□□□□ -0.61
PTPN18-209ENST00000464576 M0R2C6 588 aa11.21□□□□□ -0.61
PTPN18-209ENST00000464576 ATP2A1O14983 1001 aa11.21□□□□□ -0.61
PTPN18-209ENST00000464576 KIAA0355O15063 1070 aa11.21□□□□□ -0.61
PTPN18-209ENST00000464576 TLR3O15455 904 aaKnown RBP11.21□□□□□ -0.61
PTPN18-209ENST00000464576 SLC1A4P43007 532 aa11.21□□□□□ -0.61
PTPN18-209ENST00000464576 STAT2P52630 851 aa11.21□□□□□ -0.61
PTPN18-209ENST00000464576 OAZ1P54368 228 aa11.21□□□□□ -0.61
PTPN18-209ENST00000464576 TFAP4Q01664 338 aa11.21□□□□□ -0.61
PTPN18-209ENST00000464576 GNASQ5JWF2 1037 aa11.21□□□□□ -0.61
PTPN18-209ENST00000464576 MAMDC4Q6UXC1 1216 aa11.21□□□□□ -0.61
PTPN18-209ENST00000464576 ZNF467Q7Z7K2 595 aaPredicted RBP11.21□□□□□ -0.61
PTPN18-209ENST00000464576 GMCL1P1Q8NEA9 526 aa11.21□□□□□ -0.61
PTPN18-209ENST00000464576 MKL1Q969V6 931 aa11.21□□□□□ -0.61
PTPN18-209ENST00000464576 LENG1Q96BZ8 264 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms