RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 NBPF4Q96M43 638 aa7.14□□□□□ -1.27
USP25-207ENST00000464435 TM9SF2Q99805 663 aa7.14□□□□□ -1.27
USP25-207ENST00000464435 KRTAP4-11Q9BYQ6 195 aa7.14□□□□□ -1.27
USP25-207ENST00000464435 TRIM55Q9BYV6 548 aa7.14□□□□□ -1.27
USP25-207ENST00000464435 ACTR10Q9NZ32 417 aa7.14□□□□□ -1.27
USP25-207ENST00000464435 ZNF281Q9Y2X9 895 aa7.14□□□□□ -1.27
USP25-207ENST00000464435 PCDHA11Q9Y5I1 949 aa7.14□□□□□ -1.27
USP25-207ENST00000464435 FITM1A5D6W6 292 aa7.13□□□□□ -1.27
USP25-207ENST00000464435 LRRC10BA6NIK2 292 aa7.13□□□□□ -1.27
USP25-207ENST00000464435 ENDOUP21128 410 aaKnown RBP7.13□□□□□ -1.27
USP25-207ENST00000464435 CHRNEQ04844 493 aa7.13□□□□□ -1.27
USP25-207ENST00000464435 ZNF124Q15973 351 aa7.13□□□□□ -1.27
USP25-207ENST00000464435 OR6P1Q8NGX9 317 aa7.13□□□□□ -1.27
USP25-207ENST00000464435 MYLIPQ8WY64 445 aa7.13□□□□□ -1.27
USP25-207ENST00000464435 HDAC8Q9BY41 377 aa7.13□□□□□ -1.27
USP25-207ENST00000464435 ADAMTS10Q9H324 1103 aa7.13□□□□□ -1.27
USP25-207ENST00000464435 SHISA3A0PJX4 238 aa7.12□□□□□ -1.27
USP25-207ENST00000464435 B2RBV5 119 aa7.12□□□□□ -1.27
USP25-207ENST00000464435 ZGLP1P0C6A0 271 aa7.12□□□□□ -1.27
USP25-207ENST00000464435 ACRP10323 421 aa7.12□□□□□ -1.27
USP25-207ENST00000464435 TEKQ02763 1124 aa7.12□□□□□ -1.27
USP25-207ENST00000464435 ZYXQ15942 572 aaKnown RBP7.12□□□□□ -1.27
USP25-207ENST00000464435 PPP2R5EQ16537 467 aa7.12□□□□□ -1.27
USP25-207ENST00000464435 FBLN7Q53RD9 439 aa7.12□□□□□ -1.27
USP25-207ENST00000464435 MICAL1Q8TDZ2 1067 aa7.12□□□□□ -1.27
USP25-207ENST00000464435 SMARCC1Q92922 1105 aaPredicted RBP7.12□□□□□ -1.27
USP25-207ENST00000464435 SLC38A3Q99624 504 aa7.12□□□□□ -1.27
USP25-207ENST00000464435 R3HCC1Q9Y3T6 440 aaKnown RBP7.12□□□□□ -1.27
USP25-207ENST00000464435 FAM86C2PA6NEL3 165 aa7.11□□□□□ -1.27
USP25-207ENST00000464435 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.11□□□□□ -1.27
USP25-207ENST00000464435 POLR2BP30876 1174 aaKnown RBP7.11□□□□□ -1.27
USP25-207ENST00000464435 HK2P52789 917 aa7.11□□□□□ -1.27
USP25-207ENST00000464435 PCBP3P57721 371 aaKnown RBP7.11□□□□□ -1.27
USP25-207ENST00000464435 RASA3Q14644 834 aa7.11□□□□□ -1.27
USP25-207ENST00000464435 SNX17Q15036 470 aa7.11□□□□□ -1.27
USP25-207ENST00000464435 LARP1BQ659C4 914 aaKnown RBP7.11□□□□□ -1.27
USP25-207ENST00000464435 SPOCD1Q6ZMY3 1216 aa7.11□□□□□ -1.27
USP25-207ENST00000464435 ANKS4BQ8N8V4 417 aa7.11□□□□□ -1.27
USP25-207ENST00000464435 LINC00116Q8NCU8 138 aa7.11□□□□□ -1.27
USP25-207ENST00000464435 SLC9A7Q96T83 725 aa7.11□□□□□ -1.27
USP25-207ENST00000464435 ST7Q9NRC1 585 aa7.11□□□□□ -1.27
USP25-207ENST00000464435 SNTG2Q9NY99 539 aa7.11□□□□□ -1.27
USP25-207ENST00000464435 CDK11AQ9UQ88 783 aaPredicted RBP7.11□□□□□ -1.27
USP25-207ENST00000464435 A0A1W2PQH9 124 aa7.1□□□□□ -1.27
USP25-207ENST00000464435 CCDC85CA6NKD9 419 aa7.1□□□□□ -1.27
USP25-207ENST00000464435 DBX1A6NMT0 343 aa7.1□□□□□ -1.27
USP25-207ENST00000464435 SIGLEC6O43699 453 aa7.1□□□□□ -1.27
USP25-207ENST00000464435 GUCY2CP25092 1073 aa7.1□□□□□ -1.27
USP25-207ENST00000464435 CASP7P55210 303 aa7.1□□□□□ -1.27
USP25-207ENST00000464435 MESP2Q0VG99 397 aa7.1□□□□□ -1.27
USP25-207ENST00000464435 DDR2Q16832 855 aa7.1□□□□□ -1.27
USP25-207ENST00000464435 MPZL3Q6UWV2 235 aa7.1□□□□□ -1.27
USP25-207ENST00000464435 NOP9Q86U38 636 aaKnown RBP7.1□□□□□ -1.27
USP25-207ENST00000464435 JAZF1Q86VZ6 243 aa7.1□□□□□ -1.27
USP25-207ENST00000464435 KSR1Q8IVT5 923 aa7.1□□□□□ -1.27
USP25-207ENST00000464435 TMEM192Q8IY95 271 aa7.1□□□□□ -1.27
USP25-207ENST00000464435 USHBP1Q8N6Y0 703 aa7.1□□□□□ -1.27
USP25-207ENST00000464435 C19orf47Q8N9M1 422 aaKnown RBP7.1□□□□□ -1.27
USP25-207ENST00000464435 LINC01599Q8WXQ3 324 aa7.1□□□□□ -1.27
USP25-207ENST00000464435 TCTN2Q96GX1 697 aa7.1□□□□□ -1.27
USP25-207ENST00000464435 CWC22Q9HCG8 908 aaKnown RBP7.1□□□□□ -1.27
USP25-207ENST00000464435 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.1□□□□□ -1.27
USP25-207ENST00000464435 SIRPGQ9P1W8 387 aa7.1□□□□□ -1.27
USP25-207ENST00000464435 SUCOQ9UBS9 1254 aaKnown RBP7.1□□□□□ -1.27
USP25-207ENST00000464435 SSU72P8A0A1W2PR75 194 aa7.09□□□□□ -1.27
USP25-207ENST00000464435 FAM221BA6H8Z2 402 aa7.09□□□□□ -1.27
USP25-207ENST00000464435 RBAK-RBAKDNI3L0D1 243 aa7.09□□□□□ -1.27
USP25-207ENST00000464435 U2SURPO15042 1029 aaKnown RBP7.09□□□□□ -1.27
USP25-207ENST00000464435 PKN1Q16512 942 aa7.09□□□□□ -1.27
USP25-207ENST00000464435 MLANAQ16655 118 aa7.09□□□□□ -1.27
USP25-207ENST00000464435 ANKRD39Q53RE8 183 aa7.09□□□□□ -1.27
USP25-207ENST00000464435 FAM177A1Q8N128 213 aaPredicted RBP7.09□□□□□ -1.27
USP25-207ENST00000464435 LIN37Q96GY3 246 aaPredicted RBP7.09□□□□□ -1.27
USP25-207ENST00000464435 SLC6A18Q96N87 628 aa7.09□□□□□ -1.27
USP25-207ENST00000464435 DEPDC7Q96QD5 511 aa7.09□□□□□ -1.27
USP25-207ENST00000464435 SRPK1Q96SB4 655 aaKnown RBP7.09□□□□□ -1.27
USP25-207ENST00000464435 PPP1R16BQ96T49 567 aa7.09□□□□□ -1.27
USP25-207ENST00000464435 PRDM14Q9GZV8 571 aa7.09□□□□□ -1.27
USP25-207ENST00000464435 MSRB2Q9Y3D2 182 aa7.09□□□□□ -1.27
USP25-207ENST00000464435 PCDHB12Q9Y5F1 795 aa7.09□□□□□ -1.27
USP25-207ENST00000464435 LTBP3Q9NS15 1303 aa7.08□□□□□ -1.28
USP25-207ENST00000464435 KIR2DL1P43626 348 aaPredicted RBP7.08□□□□□ -1.28
USP25-207ENST00000464435 KIR2DL2P43627 348 aaPredicted RBP7.08□□□□□ -1.28
USP25-207ENST00000464435 PMS1P54277 932 aaKnown RBP7.08□□□□□ -1.28
USP25-207ENST00000464435 AUHQ13825 339 aaKnown RBP7.08□□□□□ -1.28
USP25-207ENST00000464435 NFE2L2Q16236 605 aa7.08□□□□□ -1.28
USP25-207ENST00000464435 BBS9Q3SYG4 887 aa7.08□□□□□ -1.28
USP25-207ENST00000464435 TMC3Q7Z5M5 1100 aa7.08□□□□□ -1.28
USP25-207ENST00000464435 MKRN2Q9H000 416 aaKnown RBP7.08□□□□□ -1.28
USP25-207ENST00000464435 SP110Q9HB58 689 aa7.08□□□□□ -1.28
USP25-207ENST00000464435 CHST7Q9NS84 486 aa7.08□□□□□ -1.28
USP25-207ENST00000464435 TCFL5Q9UL49 500 aa7.08□□□□□ -1.28
USP25-207ENST00000464435 TBX22Q9Y458 520 aa7.08□□□□□ -1.28
USP25-207ENST00000464435 SLC12A7Q9Y666 1083 aa7.08□□□□□ -1.28
USP25-207ENST00000464435 GJB6O95452 261 aa7.07□□□□□ -1.28
USP25-207ENST00000464435 MRM1Q6IN84 353 aaKnown RBP7.07□□□□□ -1.28
USP25-207ENST00000464435 C6orf15Q6UXA7 325 aaPredicted RBP7.07□□□□□ -1.28
USP25-207ENST00000464435 UNC5AQ6ZN44 842 aa7.07□□□□□ -1.28
USP25-207ENST00000464435 C7orf61Q8IZ16 206 aa7.07□□□□□ -1.28
USP25-207ENST00000464435 FBXO15Q8NCQ5 510 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms