RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 POTEFA5A3E0 1075 aa20■□□□□ 0.79
VPS52-215ENST00000464425 SLC15A5A6NIM6 579 aa20■□□□□ 0.79
VPS52-215ENST00000464425 INHAP05111 366 aa20■□□□□ 0.79
VPS52-215ENST00000464425 RGS2P41220 211 aa20■□□□□ 0.79
VPS52-215ENST00000464425 TTBK2Q6IQ55 1244 aa20■□□□□ 0.79
VPS52-215ENST00000464425 FAM160B2Q86V87 743 aa20■□□□□ 0.79
VPS52-215ENST00000464425 RIOX2Q8IUF8 465 aa20■□□□□ 0.79
VPS52-215ENST00000464425 ENAHQ8N8S7 591 aaPredicted RBP20■□□□□ 0.79
VPS52-215ENST00000464425 TMEM106CQ9BVX2 250 aa20■□□□□ 0.79
VPS52-215ENST00000464425 MROH8Q9H579 483 aa20■□□□□ 0.79
VPS52-215ENST00000464425 RAVER2Q9HCJ3 691 aaKnown RBP20■□□□□ 0.79
VPS52-215ENST00000464425 GPCPD1Q9NPB8 672 aa20■□□□□ 0.79
VPS52-215ENST00000464425 ZNF214Q9UL59 606 aaPredicted RBP20■□□□□ 0.79
VPS52-215ENST00000464425 TNKSO95271 1327 aa20■□□□□ 0.79
VPS52-215ENST00000464425 PARP14Q460N5 1801 aa19.99■□□□□ 0.79
VPS52-215ENST00000464425 SLC27A2O14975 620 aa19.99■□□□□ 0.79
VPS52-215ENST00000464425 SLC25A27O95847 323 aa19.99■□□□□ 0.79
VPS52-215ENST00000464425 PDHBP11177 359 aa19.99■□□□□ 0.79
VPS52-215ENST00000464425 SLC16A2P36021 539 aa19.99■□□□□ 0.79
VPS52-215ENST00000464425 SNAP25P60880 206 aa19.99■□□□□ 0.79
VPS52-215ENST00000464425 UBXN2AP68543 259 aa19.99■□□□□ 0.79
VPS52-215ENST00000464425 MAP2K5Q13163 448 aa19.99■□□□□ 0.79
VPS52-215ENST00000464425 GRB14Q14449 540 aa19.99■□□□□ 0.79
VPS52-215ENST00000464425 CHST3Q7LGC8 479 aa19.99■□□□□ 0.79
VPS52-215ENST00000464425 RALYLQ86SE5 291 aaKnown RBP19.99■□□□□ 0.79
VPS52-215ENST00000464425 NCOA7Q8NI08 942 aa19.99■□□□□ 0.79
VPS52-215ENST00000464425 ANKS1AQ92625 1134 aa19.99■□□□□ 0.79
VPS52-215ENST00000464425 KAT14Q9H8E8 782 aa19.99■□□□□ 0.79
VPS52-215ENST00000464425 SLC38A10Q9HBR0 1119 aa19.99■□□□□ 0.79
VPS52-215ENST00000464425 A0A0G2JMZ2 1700 aa19.99■□□□□ 0.79
VPS52-215ENST00000464425 KIAA0100Q14667 2235 aaKnown RBP19.98■□□□□ 0.79
VPS52-215ENST00000464425 PLA2G6O60733 806 aa19.98■□□□□ 0.79
VPS52-215ENST00000464425 EIF5BO60841 1220 aaKnown RBP19.98■□□□□ 0.79
VPS52-215ENST00000464425 REC8O95072 547 aa19.98■□□□□ 0.79
VPS52-215ENST00000464425 XRCC5P13010 732 aaKnown RBP19.98■□□□□ 0.79
VPS52-215ENST00000464425 CCL5P13501 91 aa19.98■□□□□ 0.79
VPS52-215ENST00000464425 TRIM32Q13049 653 aa19.98■□□□□ 0.79
VPS52-215ENST00000464425 NECTIN1Q15223 517 aa19.98■□□□□ 0.79
VPS52-215ENST00000464425 CCL14Q16627 93 aa19.98■□□□□ 0.79
VPS52-215ENST00000464425 CREB3L3Q68CJ9 461 aa19.98■□□□□ 0.79
VPS52-215ENST00000464425 SNRNP48Q6IEG0 339 aaKnown RBP19.98■□□□□ 0.79
VPS52-215ENST00000464425 PNMA1Q8ND90 353 aa19.98■□□□□ 0.79
VPS52-215ENST00000464425 TRIB2Q92519 343 aa19.98■□□□□ 0.79
VPS52-215ENST00000464425 TEX13BQ9BXU2 312 aa19.98■□□□□ 0.79
VPS52-215ENST00000464425 RIPK3Q9Y572 518 aa19.98■□□□□ 0.79
VPS52-215ENST00000464425 PLXNB2O15031 1838 aa19.97■□□□□ 0.79
VPS52-215ENST00000464425 COL11A1P12107 1806 aaPredicted RBP19.97■□□□□ 0.79
VPS52-215ENST00000464425 EPB41L2O43491 1005 aaKnown RBP19.97■□□□□ 0.79
VPS52-215ENST00000464425 STRNO43815 780 aa19.97■□□□□ 0.79
VPS52-215ENST00000464425 ADORA2AP29274 412 aa19.97■□□□□ 0.79
VPS52-215ENST00000464425 IFIT1BQ5T764 474 aaKnown RBP19.97■□□□□ 0.79
VPS52-215ENST00000464425 DPP9Q86TI2 863 aa19.97■□□□□ 0.79
VPS52-215ENST00000464425 APBA2Q99767 749 aa19.97■□□□□ 0.79
VPS52-215ENST00000464425 RNF208Q9H0X6 261 aa19.97■□□□□ 0.79
VPS52-215ENST00000464425 UNC93B1Q9H1C4 597 aa19.97■□□□□ 0.79
VPS52-215ENST00000464425 PRR12Q9ULL5 1215 aa19.97■□□□□ 0.79
VPS52-215ENST00000464425 IFIT3O14879 490 aaKnown RBP19.96■□□□□ 0.79
VPS52-215ENST00000464425 ATP2A1O14983 1001 aa19.96■□□□□ 0.79
VPS52-215ENST00000464425 HMGCRP04035 888 aa19.96■□□□□ 0.79
VPS52-215ENST00000464425 GOLGA8HP0CJ92 632 aa19.96■□□□□ 0.79
VPS52-215ENST00000464425 FCER1AP12319 257 aa19.96■□□□□ 0.79
VPS52-215ENST00000464425 ZKSCAN1P17029 563 aaPredicted RBP19.96■□□□□ 0.79
VPS52-215ENST00000464425 EN2P19622 333 aaPredicted RBP19.96■□□□□ 0.79
VPS52-215ENST00000464425 ZNF543Q08ER8 600 aa19.96■□□□□ 0.79
VPS52-215ENST00000464425 CCDC174Q6PII3 467 aa19.96■□□□□ 0.79
VPS52-215ENST00000464425 NPLOC4Q8TAT6 608 aa19.96■□□□□ 0.79
VPS52-215ENST00000464425 MMP19Q99542 508 aa19.96■□□□□ 0.79
VPS52-215ENST00000464425 COBLO75128 1261 aa19.95■□□□□ 0.78
VPS52-215ENST00000464425 SNHG28P0DPA3 235 aa19.95■□□□□ 0.78
VPS52-215ENST00000464425 FDX1P10109 184 aa19.95■□□□□ 0.78
VPS52-215ENST00000464425 COPB2P35606 906 aa19.95■□□□□ 0.78
VPS52-215ENST00000464425 SEC23AQ15436 765 aa19.95■□□□□ 0.78
VPS52-215ENST00000464425 SYDE2Q5VT97 1194 aa19.95■□□□□ 0.78
VPS52-215ENST00000464425 MB21D2Q8IYB1 491 aaPredicted RBP19.95■□□□□ 0.78
VPS52-215ENST00000464425 AGBL1Q96MI9 1066 aa19.95■□□□□ 0.78
VPS52-215ENST00000464425 FLRT1Q9NZU1 646 aa19.95■□□□□ 0.78
VPS52-215ENST00000464425 BRCA2P51587 3418 aa19.95■□□□□ 0.78
VPS52-215ENST00000464425 ERICH2A1L162 156 aa19.94■□□□□ 0.78
VPS52-215ENST00000464425 RGS19P49795 217 aa19.94■□□□□ 0.78
VPS52-215ENST00000464425 OAZ1P54368 228 aa19.94■□□□□ 0.78
VPS52-215ENST00000464425 ANTXR2P58335 489 aa19.94■□□□□ 0.78
VPS52-215ENST00000464425 KCTD2Q14681 263 aa19.94■□□□□ 0.78
VPS52-215ENST00000464425 BTNL9Q6UXG8 535 aa19.94■□□□□ 0.78
VPS52-215ENST00000464425 TRMT44Q8IYL2 757 aaKnown RBP19.94■□□□□ 0.78
VPS52-215ENST00000464425 ABRAQ8N0Z2 381 aa19.94■□□□□ 0.78
VPS52-215ENST00000464425 SENP2Q9HC62 589 aa19.94■□□□□ 0.78
VPS52-215ENST00000464425 HOMER2Q9NSB8 354 aa19.94■□□□□ 0.78
VPS52-215ENST00000464425 ZNF536O15090 1300 aa19.94■□□□□ 0.78
VPS52-215ENST00000464425 PGK2P07205 417 aa19.93■□□□□ 0.78
VPS52-215ENST00000464425 HOXC6P09630 235 aa19.93■□□□□ 0.78
VPS52-215ENST00000464425 PRKAR2AP13861 404 aaKnown RBP19.93■□□□□ 0.78
VPS52-215ENST00000464425 COL9A3Q14050 684 aaPredicted RBP19.93■□□□□ 0.78
VPS52-215ENST00000464425 SART3Q15020 963 aaKnown RBP19.93■□□□□ 0.78
VPS52-215ENST00000464425 RNF20Q5VTR2 975 aa19.93■□□□□ 0.78
VPS52-215ENST00000464425 UBA5Q9GZZ9 404 aa19.93■□□□□ 0.78
VPS52-215ENST00000464425 CPVLQ9H3G5 476 aa19.93■□□□□ 0.78
VPS52-215ENST00000464425 TAL1P17542 331 aaPredicted RBP19.92■□□□□ 0.78
VPS52-215ENST00000464425 WTAPQ15007 396 aa19.92■□□□□ 0.78
VPS52-215ENST00000464425 C8orf34Q49A92 452 aa19.92■□□□□ 0.78
VPS52-215ENST00000464425 TMEM67Q5HYA8 995 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms