RNA–Protein interactions for RNA: ENST00000463764.2

TRANK1-202, Transcript of tetratricopeptide repeat and ankyrin repeat containing 1, humanhuman

TSL 2

Gene TRANK1, Length 476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1-202ENST00000463764 KIFC2Q96AC6 838 aa13.39□□□□□ -0.27
TRANK1-202ENST00000463764 NUP88Q99567 741 aaPredicted RBP13.39□□□□□ -0.27
TRANK1-202ENST00000463764 NUDT12Q9BQG2 462 aa13.39□□□□□ -0.27
TRANK1-202ENST00000463764 FBXO40Q9UH90 709 aa13.39□□□□□ -0.27
TRANK1-202ENST00000463764 CCDC69A6NI79 296 aa13.38□□□□□ -0.27
TRANK1-202ENST00000463764 DDAH1O94760 285 aa13.38□□□□□ -0.27
TRANK1-202ENST00000463764 KIF5BP33176 963 aa13.38□□□□□ -0.27
TRANK1-202ENST00000463764 STAT3P40763 770 aa13.38□□□□□ -0.27
TRANK1-202ENST00000463764 RGS2P41220 211 aa13.38□□□□□ -0.27
TRANK1-202ENST00000463764 ZNF543Q08ER8 600 aa13.38□□□□□ -0.27
TRANK1-202ENST00000463764 TKFCQ3LXA3 575 aa13.38□□□□□ -0.27
TRANK1-202ENST00000463764 WDR78Q5VTH9 848 aa13.38□□□□□ -0.27
TRANK1-202ENST00000463764 SAMD1Q6SPF0 538 aaPredicted RBP13.38□□□□□ -0.27
TRANK1-202ENST00000463764 SYNE3Q6ZMZ3 975 aa13.38□□□□□ -0.27
TRANK1-202ENST00000463764 STOX1Q6ZVD7 989 aa13.38□□□□□ -0.27
TRANK1-202ENST00000463764 CYB5R4Q7L1T6 521 aa13.38□□□□□ -0.27
TRANK1-202ENST00000463764 DHX32Q7L7V1 743 aaKnown RBP13.38□□□□□ -0.27
TRANK1-202ENST00000463764 RIOX2Q8IUF8 465 aa13.38□□□□□ -0.27
TRANK1-202ENST00000463764 KCNB2Q92953 911 aa13.38□□□□□ -0.27
TRANK1-202ENST00000463764 MAP3K14Q99558 947 aa13.38□□□□□ -0.27
TRANK1-202ENST00000463764 SLC38A10Q9HBR0 1119 aa13.38□□□□□ -0.27
TRANK1-202ENST00000463764 TXNRD2Q9NNW7 524 aa13.38□□□□□ -0.27
TRANK1-202ENST00000463764 FBXO28Q9NVF7 368 aa13.38□□□□□ -0.27
TRANK1-202ENST00000463764 MYH6P13533 1939 aa13.37□□□□□ -0.27
TRANK1-202ENST00000463764 ZSWIM8A7E2V4 1837 aa13.37□□□□□ -0.27
TRANK1-202ENST00000463764 SLC15A5A6NIM6 579 aa13.37□□□□□ -0.27
TRANK1-202ENST00000463764 CNMDO75829 334 aa13.37□□□□□ -0.27
TRANK1-202ENST00000463764 XRCC5P13010 732 aaKnown RBP13.37□□□□□ -0.27
TRANK1-202ENST00000463764 ANAPC15P60006 121 aa13.37□□□□□ -0.27
TRANK1-202ENST00000463764 FGD1P98174 961 aa13.37□□□□□ -0.27
TRANK1-202ENST00000463764 SLC9C1Q4G0N8 1177 aa13.37□□□□□ -0.27
TRANK1-202ENST00000463764 SYDE2Q5VT97 1194 aa13.37□□□□□ -0.27
TRANK1-202ENST00000463764 BLOC1S2Q6QNY1 142 aa13.37□□□□□ -0.27
TRANK1-202ENST00000463764 NFXL1Q6ZNB6 911 aa13.37□□□□□ -0.27
TRANK1-202ENST00000463764 KCTD1Q719H9 257 aa13.37□□□□□ -0.27
TRANK1-202ENST00000463764 GPR142Q7Z601 462 aa13.37□□□□□ -0.27
TRANK1-202ENST00000463764 CTCFLQ8NI51 663 aaPredicted RBP13.37□□□□□ -0.27
TRANK1-202ENST00000463764 PXYLP1Q8TE99 480 aa13.37□□□□□ -0.27
TRANK1-202ENST00000463764 MOV10L1Q9BXT6 1211 aaKnown RBP13.37□□□□□ -0.27
TRANK1-202ENST00000463764 MAF1Q9H063 256 aa13.37□□□□□ -0.27
TRANK1-202ENST00000463764 BTBD7Q9P203 1132 aa13.37□□□□□ -0.27
TRANK1-202ENST00000463764 ZNF214Q9UL59 606 aaPredicted RBP13.37□□□□□ -0.27
TRANK1-202ENST00000463764 MTMR7Q9Y216 660 aa13.37□□□□□ -0.27
TRANK1-202ENST00000463764 DOCK3Q8IZD9 2030 aa13.37□□□□□ -0.27
TRANK1-202ENST00000463764 FCER1AP12319 257 aa13.36□□□□□ -0.27
TRANK1-202ENST00000463764 CAPN2P17655 700 aa13.36□□□□□ -0.27
TRANK1-202ENST00000463764 GNAQP50148 359 aa13.36□□□□□ -0.27
TRANK1-202ENST00000463764 RCAN1P53805 252 aa13.36□□□□□ -0.27
TRANK1-202ENST00000463764 UBXN2AP68543 259 aa13.36□□□□□ -0.27
TRANK1-202ENST00000463764 KCTD2Q14681 263 aa13.36□□□□□ -0.27
TRANK1-202ENST00000463764 TMEM132BQ14DG7 1078 aa13.36□□□□□ -0.27
TRANK1-202ENST00000463764 SNRNP48Q6IEG0 339 aaKnown RBP13.36□□□□□ -0.27
TRANK1-202ENST00000463764 NCAPG2Q86XI2 1143 aa13.36□□□□□ -0.27
TRANK1-202ENST00000463764 CHST13Q8NET6 341 aa13.36□□□□□ -0.27
TRANK1-202ENST00000463764 APBA2Q99767 749 aa13.36□□□□□ -0.27
TRANK1-202ENST00000463764 LZTS2Q9BRK4 669 aa13.36□□□□□ -0.27
TRANK1-202ENST00000463764 ARHGAP39Q9C0H5 1083 aa13.36□□□□□ -0.27
TRANK1-202ENST00000463764 PRR12Q9ULL5 1215 aa13.36□□□□□ -0.27
TRANK1-202ENST00000463764 SH2B2O14492 632 aaPredicted RBP13.35□□□□□ -0.27
TRANK1-202ENST00000463764 ERCC3P19447 782 aa13.35□□□□□ -0.27
TRANK1-202ENST00000463764 PTPREP23469 700 aa13.35□□□□□ -0.27
TRANK1-202ENST00000463764 GRK4P32298 578 aa13.35□□□□□ -0.27
TRANK1-202ENST00000463764 FLT3LGP49771 235 aa13.35□□□□□ -0.27
TRANK1-202ENST00000463764 PRKCZQ05513 592 aa13.35□□□□□ -0.27
TRANK1-202ENST00000463764 GRB14Q14449 540 aa13.35□□□□□ -0.27
TRANK1-202ENST00000463764 PPP2R5BQ15173 497 aa13.35□□□□□ -0.27
TRANK1-202ENST00000463764 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRANK1-202ENST00000463764 SGMS1Q86VZ5 419 aa13.35□□□□□ -0.27
TRANK1-202ENST00000463764 REPS2Q8NFH8 660 aa13.35□□□□□ -0.27
TRANK1-202ENST00000463764 IGDCC4Q8TDY8 1250 aa13.35□□□□□ -0.27
TRANK1-202ENST00000463764 ARMC5Q96C12 935 aa13.35□□□□□ -0.27
TRANK1-202ENST00000463764 ABHD8Q96I13 439 aa13.35□□□□□ -0.27
TRANK1-202ENST00000463764 JAKMIP1Q96N16 626 aaKnown RBP13.35□□□□□ -0.27
TRANK1-202ENST00000463764 USP26Q9BXU7 913 aa13.35□□□□□ -0.27
TRANK1-202ENST00000463764 TM6SF1Q9BZW5 370 aa13.35□□□□□ -0.27
TRANK1-202ENST00000463764 PORCNQ9H237 461 aa13.35□□□□□ -0.27
TRANK1-202ENST00000463764 RANBP17Q9H2T7 1088 aaKnown RBP13.35□□□□□ -0.27
TRANK1-202ENST00000463764 UPF2Q9HAU5 1272 aaKnown RBP13.35□□□□□ -0.27
TRANK1-202ENST00000463764 LY9Q9HBG7 655 aa13.35□□□□□ -0.27
TRANK1-202ENST00000463764 HPS5Q9UPZ3 1129 aa13.35□□□□□ -0.27
TRANK1-202ENST00000463764 SLC12A7Q9Y666 1083 aa13.35□□□□□ -0.27
TRANK1-202ENST00000463764 FRMPD2Q68DX3 1309 aaPredicted RBP13.35□□□□□ -0.27
TRANK1-202ENST00000463764 DHX16O60231 1041 aaKnown RBP13.34□□□□□ -0.27
TRANK1-202ENST00000463764 ICAM1P05362 532 aa13.34□□□□□ -0.27
TRANK1-202ENST00000463764 HOXC6P09630 235 aa13.34□□□□□ -0.27
TRANK1-202ENST00000463764 ANTXR2P58335 489 aa13.34□□□□□ -0.27
TRANK1-202ENST00000463764 MAP2K5Q13163 448 aa13.34□□□□□ -0.27
TRANK1-202ENST00000463764 GRM4Q14833 912 aa13.34□□□□□ -0.27
TRANK1-202ENST00000463764 Q3C1V9 767 aa13.34□□□□□ -0.27
TRANK1-202ENST00000463764 MORN1Q5T089 497 aa13.34□□□□□ -0.27
TRANK1-202ENST00000463764 ZNF654Q8IZM8 581 aa13.34□□□□□ -0.27
TRANK1-202ENST00000463764 CPXCR1Q8N123 301 aa13.34□□□□□ -0.27
TRANK1-202ENST00000463764 MMP19Q99542 508 aa13.34□□□□□ -0.27
TRANK1-202ENST00000463764 ACAD9Q9H845 621 aa13.34□□□□□ -0.27
TRANK1-202ENST00000463764 GPCPD1Q9NPB8 672 aa13.34□□□□□ -0.27
TRANK1-202ENST00000463764 SNX14Q9Y5W7 946 aa13.34□□□□□ -0.27
TRANK1-202ENST00000463764 PTCH2Q9Y6C5 1203 aa13.34□□□□□ -0.27
TRANK1-202ENST00000463764 TAF6LQ9Y6J9 622 aa13.34□□□□□ -0.27
TRANK1-202ENST00000463764 RBBP6Q7Z6E9 1792 aaKnown RBP13.34□□□□□ -0.27
TRANK1-202ENST00000463764 PFASO15067 1338 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms