RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 DHX58Q96C10 678 aa9.83□□□□□ -0.84
SHQ1-203ENST00000463369 FAM227BQ96M60 508 aa9.83□□□□□ -0.84
SHQ1-203ENST00000463369 CCSER2Q9H7U1 834 aa9.83□□□□□ -0.84
SHQ1-203ENST00000463369 NOVA2Q9UNW9 492 aaKnown RBP9.83□□□□□ -0.84
SHQ1-203ENST00000463369 TAF6LQ9Y6J9 622 aa9.83□□□□□ -0.84
SHQ1-203ENST00000463369 LRRC37AA6NMS7 1700 aa9.82□□□□□ -0.84
SHQ1-203ENST00000463369 KIAA1551Q9HCM1 1747 aa9.82□□□□□ -0.84
SHQ1-203ENST00000463369 DNAJC6O75061 913 aa9.82□□□□□ -0.84
SHQ1-203ENST00000463369 ERLIN1O75477 346 aa9.82□□□□□ -0.84
SHQ1-203ENST00000463369 HOXA10P31260 410 aaPredicted RBP9.82□□□□□ -0.84
SHQ1-203ENST00000463369 MAP2K2P36507 400 aa9.82□□□□□ -0.84
SHQ1-203ENST00000463369 UBASH3AP57075 661 aa9.82□□□□□ -0.84
SHQ1-203ENST00000463369 RPS8P62241 208 aaKnown RBP9.82□□□□□ -0.84
SHQ1-203ENST00000463369 TFCP2Q12800 502 aa9.82□□□□□ -0.84
SHQ1-203ENST00000463369 NMIQ13287 307 aaPredicted RBP9.82□□□□□ -0.84
SHQ1-203ENST00000463369 ELOAQ14241 798 aaKnown RBP9.82□□□□□ -0.84
SHQ1-203ENST00000463369 WASHC4Q2M389 1173 aa9.82□□□□□ -0.84
SHQ1-203ENST00000463369 ODR4Q5SWX8 454 aa9.82□□□□□ -0.84
SHQ1-203ENST00000463369 ADALQ6DHV7 355 aa9.82□□□□□ -0.84
SHQ1-203ENST00000463369 SRGAP1Q7Z6B7 1085 aa9.82□□□□□ -0.84
SHQ1-203ENST00000463369 ANKRD18AQ8IVF6 992 aa9.82□□□□□ -0.84
SHQ1-203ENST00000463369 MSANTD4Q8NCY6 345 aa9.82□□□□□ -0.84
SHQ1-203ENST00000463369 C1orf131Q8NDD1 294 aaKnown RBP9.82□□□□□ -0.84
SHQ1-203ENST00000463369 CNNM3Q8NE01 707 aa9.82□□□□□ -0.84
SHQ1-203ENST00000463369 LLPHQ9BRT6 129 aaKnown RBP9.82□□□□□ -0.84
SHQ1-203ENST00000463369 MTFR1LQ9H019 292 aa9.82□□□□□ -0.84
SHQ1-203ENST00000463369 FAM107BQ9H098 131 aa9.82□□□□□ -0.84
SHQ1-203ENST00000463369 HSD3B7Q9H2F3 369 aa9.82□□□□□ -0.84
SHQ1-203ENST00000463369 GPR108Q9NPR9 543 aa9.82□□□□□ -0.84
SHQ1-203ENST00000463369 CNNM1Q9NRU3 951 aa9.82□□□□□ -0.84
SHQ1-203ENST00000463369 HMG20BQ9P0W2 317 aa9.82□□□□□ -0.84
SHQ1-203ENST00000463369 MYO5AQ9Y4I1 1855 aaKnown RBP9.81□□□□□ -0.84
SHQ1-203ENST00000463369 CCDC196A0A1B0GTZ2 297 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 A0A1W2PQ27 194 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 A0A1W2PQ64 194 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 A0A1W2PQD8 194 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 CUTAO60888 179 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 AP1G2O75843 785 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 ATP1A3P13637 1013 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 CHMP4BP1P59074 171 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 TUBB4BP68371 445 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 RPAINQ86UA6 219 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 VSTM4Q8IW00 320 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 MICALL1Q8N3F8 863 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 ANKRD20A12PQ8NF67 263 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 RPGRQ92834 1020 aaKnown RBP9.81□□□□□ -0.84
SHQ1-203ENST00000463369 CELF1Q92879 486 aaKnown RBP9.81□□□□□ -0.84
SHQ1-203ENST00000463369 MPHOSPH6Q99547 160 aaKnown RBP9.81□□□□□ -0.84
SHQ1-203ENST00000463369 PAGR1Q9BTK6 254 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 ABCB6Q9NP58 842 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 MED4Q9NPJ6 270 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 CEP126Q9P2H0 1117 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 PCDHA7Q9UN72 937 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 MYH7P12883 1935 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 NEDD4P46934 1319 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 MROH5Q6ZUA9 1318 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 A0A1B0GVL5 298 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 LDHAP00338 332 aaKnown RBP9.81□□□□□ -0.84
SHQ1-203ENST00000463369 NDUFA8P51970 172 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 PTGDRQ13258 359 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 HSP90B2PQ58FF3 399 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 TTC39BQ5VTQ0 682 aaPredicted RBP9.81□□□□□ -0.84
SHQ1-203ENST00000463369 EP400NLQ6ZTU2 488 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 DPF2Q92785 391 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 EAF2Q96CJ1 260 aaPredicted RBP9.81□□□□□ -0.84
SHQ1-203ENST00000463369 RBM17Q96I25 401 aaKnown RBP9.81□□□□□ -0.84
SHQ1-203ENST00000463369 CRAMP1Q96RY5 1269 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 GMLQ99445 158 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 IER2Q9BTL4 223 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 TGIF2Q9GZN2 237 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 SUFUQ9UMX1 484 aa9.81□□□□□ -0.84
SHQ1-203ENST00000463369 LTBP1Q14766 1721 aa9.8□□□□□ -0.84
SHQ1-203ENST00000463369 STX10O60499 249 aa9.8□□□□□ -0.84
SHQ1-203ENST00000463369 ZBTB7AO95365 584 aa9.8□□□□□ -0.84
SHQ1-203ENST00000463369 SERPINC1P01008 464 aa9.8□□□□□ -0.84
SHQ1-203ENST00000463369 SLC3A2P08195 630 aaKnown RBP9.8□□□□□ -0.84
SHQ1-203ENST00000463369 SRGNP10124 158 aa9.8□□□□□ -0.84
SHQ1-203ENST00000463369 TOP1P11387 765 aaKnown RBP9.8□□□□□ -0.84
SHQ1-203ENST00000463369 GOLGA8FQ08AF8 430 aa9.8□□□□□ -0.84
SHQ1-203ENST00000463369 GOLGA8DPQ0D2H9 430 aa9.8□□□□□ -0.84
SHQ1-203ENST00000463369 CBLBQ13191 982 aa9.8□□□□□ -0.84
SHQ1-203ENST00000463369 GRAPQ13588 217 aa9.8□□□□□ -0.84
SHQ1-203ENST00000463369 KRT32Q14532 448 aa9.8□□□□□ -0.84
SHQ1-203ENST00000463369 CASP8Q14790 479 aa9.8□□□□□ -0.84
SHQ1-203ENST00000463369 TNNI3KQ59H18 835 aa9.8□□□□□ -0.84
SHQ1-203ENST00000463369 METTL24Q5JXM2 366 aa9.8□□□□□ -0.84
SHQ1-203ENST00000463369 CEP112Q8N8E3 955 aa9.8□□□□□ -0.84
SHQ1-203ENST00000463369 VGLL2Q8N8G2 317 aa9.8□□□□□ -0.84
SHQ1-203ENST00000463369 GRAPLQ8TC17 118 aaPredicted RBP9.8□□□□□ -0.84
SHQ1-203ENST00000463369 SLC39A13Q96H72 371 aa9.8□□□□□ -0.84
SHQ1-203ENST00000463369 FAM161BQ96MY7 647 aa9.8□□□□□ -0.84
SHQ1-203ENST00000463369 PNKPQ96T60 521 aa9.8□□□□□ -0.84
SHQ1-203ENST00000463369 BAG1Q99933 345 aaPredicted RBP9.8□□□□□ -0.84
SHQ1-203ENST00000463369 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.8□□□□□ -0.846e-7■■■■■ 159.4
SHQ1-203ENST00000463369 NDUFB9Q9Y6M9 179 aa9.8□□□□□ -0.84
SHQ1-203ENST00000463369 FPGT-TNNI3KV9GXZ4 949 aa9.8□□□□□ -0.84
SHQ1-203ENST00000463369 ZNF609O15014 1411 aa9.8□□□□□ -0.84
SHQ1-203ENST00000463369 C10orf71Q711Q0 1435 aa9.8□□□□□ -0.84
SHQ1-203ENST00000463369 PPP1R3GB7ZBB8 358 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 BIN1O00499 593 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms