RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 NUP88Q99567 741 aaPredicted RBP23.65■■□□□ 1.38
VARS-221ENST00000463184 SEMA6BQ9H3T3 888 aa23.65■■□□□ 1.38
VARS-221ENST00000463184 UNC80Q8N2C7 3258 aa23.64■■□□□ 1.38
VARS-221ENST00000463184 SYNGAP1Q96PV0 1343 aa23.64■■□□□ 1.38
VARS-221ENST00000463184 ATP2A1O14983 1001 aa23.64■■□□□ 1.37
VARS-221ENST00000463184 NDUFB10O96000 172 aa23.64■■□□□ 1.37
VARS-221ENST00000463184 MAMDC4Q6UXC1 1216 aa23.64■■□□□ 1.37
VARS-221ENST00000463184 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.64■■□□□ 1.37
VARS-221ENST00000463184 STK11IPQ8N1F8 1099 aa23.64■■□□□ 1.37
VARS-221ENST00000463184 OSBP2Q969R2 916 aa23.64■■□□□ 1.37
VARS-221ENST00000463184 GPATCH3Q96I76 525 aa23.64■■□□□ 1.37
VARS-221ENST00000463184 ZNF287Q9HBT7 754 aa23.64■■□□□ 1.37
VARS-221ENST00000463184 FAM184BQ9ULE4 1060 aa23.64■■□□□ 1.37
VARS-221ENST00000463184 RIPK3Q9Y572 518 aa23.64■■□□□ 1.37
VARS-221ENST00000463184 GREB1LQ9C091 1923 aaPredicted RBP23.64■■□□□ 1.37
VARS-221ENST00000463184 KIAA0355O15063 1070 aa23.63■■□□□ 1.37
VARS-221ENST00000463184 RNF113AO15541 343 aaKnown RBP23.63■■□□□ 1.37
VARS-221ENST00000463184 ZBED4O75132 1171 aa23.63■■□□□ 1.37
VARS-221ENST00000463184 ADAMTS4O75173 837 aa23.63■■□□□ 1.37
VARS-221ENST00000463184 ZFYP08048 801 aaPredicted RBP23.63■■□□□ 1.37
VARS-221ENST00000463184 GNAT2P19087 354 aa23.63■■□□□ 1.37
VARS-221ENST00000463184 ITGB8P26012 769 aa23.63■■□□□ 1.37
VARS-221ENST00000463184 ZNF444Q8N0Y2 327 aaPredicted RBP23.63■■□□□ 1.37
VARS-221ENST00000463184 NUP133Q8WUM0 1156 aa23.63■■□□□ 1.37
VARS-221ENST00000463184 MKL1Q969V6 931 aa23.63■■□□□ 1.37
VARS-221ENST00000463184 TOX2Q96NM4 488 aa23.63■■□□□ 1.37
VARS-221ENST00000463184 CDX2Q99626 313 aaPredicted RBP23.63■■□□□ 1.37
VARS-221ENST00000463184 CLIP2Q9UDT6 1046 aa23.63■■□□□ 1.37
VARS-221ENST00000463184 CTDP1Q9Y5B0 961 aaPredicted RBP23.63■■□□□ 1.37
VARS-221ENST00000463184 DNAJC25-GNG10A0A024R161 153 aa23.62■■□□□ 1.37
VARS-221ENST00000463184 IGKV6D-41A0A0C4DH26 115 aa23.62■■□□□ 1.37
VARS-221ENST00000463184 PQBP1O60828 265 aaKnown RBP23.62■■□□□ 1.37
VARS-221ENST00000463184 SNAI1O95863 264 aaPredicted RBP23.62■■□□□ 1.37
VARS-221ENST00000463184 RAG1P15918 1043 aa23.62■■□□□ 1.37
VARS-221ENST00000463184 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.62■■□□□ 1.37
VARS-221ENST00000463184 ZNF467Q7Z7K2 595 aaPredicted RBP23.62■■□□□ 1.37
VARS-221ENST00000463184 SYNPO2Q9UMS6 1093 aa23.62■■□□□ 1.37
VARS-221ENST00000463184 MOXD2PA6NHM9 499 aa23.61■■□□□ 1.37
VARS-221ENST00000463184 GPAA1O43292 621 aa23.61■■□□□ 1.37
VARS-221ENST00000463184 C20orf194Q5TEA3 1177 aa23.61■■□□□ 1.37
VARS-221ENST00000463184 ANKRD33Q7Z3H0 272 aa23.61■■□□□ 1.37
VARS-221ENST00000463184 CPXCR1Q8N123 301 aa23.61■■□□□ 1.37
VARS-221ENST00000463184 KLHDC9Q8NEP7 349 aa23.61■■□□□ 1.37
VARS-221ENST00000463184 LENG1Q96BZ8 264 aaPredicted RBP23.61■■□□□ 1.37
VARS-221ENST00000463184 DCTPP1Q9H773 170 aa23.61■■□□□ 1.37
VARS-221ENST00000463184 STARD7Q9NQZ5 370 aa23.61■■□□□ 1.37
VARS-221ENST00000463184 TMEM39AQ9NV64 488 aa23.61■■□□□ 1.37
VARS-221ENST00000463184 DCDC2CA8MYV0 355 aa23.6■■□□□ 1.37
VARS-221ENST00000463184 DUSP11O75319 330 aaKnown RBP23.6■■□□□ 1.37
VARS-221ENST00000463184 TDO2P48775 406 aa23.6■■□□□ 1.37
VARS-221ENST00000463184 ACLYP53396 1101 aa23.6■■□□□ 1.37
VARS-221ENST00000463184 SLC38A10Q9HBR0 1119 aa23.6■■□□□ 1.37
VARS-221ENST00000463184 MTMR4Q9NYA4 1195 aa23.6■■□□□ 1.37
VARS-221ENST00000463184 FBXO40Q9UH90 709 aa23.6■■□□□ 1.37
VARS-221ENST00000463184 FEM1BQ9UK73 627 aa23.6■■□□□ 1.37
VARS-221ENST00000463184 ZHX1Q9UKY1 873 aaPredicted RBP23.6■■□□□ 1.37
VARS-221ENST00000463184 SYNRGQ9UMZ2 1314 aa23.59■■□□□ 1.37
VARS-221ENST00000463184 CUL9Q8IWT3 2517 aa23.59■■□□□ 1.37
VARS-221ENST00000463184 PATL2C9JE40 543 aaKnown RBP23.59■■□□□ 1.37
VARS-221ENST00000463184 APPP05067 770 aa23.59■■□□□ 1.37
VARS-221ENST00000463184 SLC4A3P48751 1232 aa23.59■■□□□ 1.37
VARS-221ENST00000463184 FAAP100Q0VG06 881 aa23.59■■□□□ 1.37
VARS-221ENST00000463184 KCNA10Q16322 511 aa23.59■■□□□ 1.37
VARS-221ENST00000463184 LRRFIP1Q32MZ4 808 aaKnown RBP23.59■■□□□ 1.37
VARS-221ENST00000463184 KIFC2Q96AC6 838 aa23.59■■□□□ 1.37
VARS-221ENST00000463184 RNPC3Q96LT9 517 aaKnown RBP23.59■■□□□ 1.37
VARS-221ENST00000463184 COL25A1Q9BXS0 654 aaPredicted RBP23.59■■□□□ 1.37
VARS-221ENST00000463184 EPB41L4AQ9HCS5 686 aaPredicted RBP23.59■■□□□ 1.37
VARS-221ENST00000463184 TTLL1O95922 423 aa23.58■■□□□ 1.37
VARS-221ENST00000463184 OAZ1P54368 228 aa23.58■■□□□ 1.37
VARS-221ENST00000463184 FPGSQ05932 587 aa23.58■■□□□ 1.37
VARS-221ENST00000463184 ACVR2BQ13705 512 aa23.58■■□□□ 1.37
VARS-221ENST00000463184 CCSAPQ6IQ19 270 aaPredicted RBP23.58■■□□□ 1.37
VARS-221ENST00000463184 ANKRD35Q8N283 1001 aa23.58■■□□□ 1.37
VARS-221ENST00000463184 GMCL1P1Q8NEA9 526 aa23.58■■□□□ 1.37
VARS-221ENST00000463184 CHST13Q8NET6 341 aa23.58■■□□□ 1.37
VARS-221ENST00000463184 CEP95Q96GE4 821 aa23.58■■□□□ 1.37
VARS-221ENST00000463184 TTYH1Q9H313 450 aaPredicted RBP23.58■■□□□ 1.37
VARS-221ENST00000463184 ABHD16BQ9H3Z7 469 aa23.58■■□□□ 1.37
VARS-221ENST00000463184 RAVER2Q9HCJ3 691 aaKnown RBP23.58■■□□□ 1.37
VARS-221ENST00000463184 TMEM265A0A087WTH1 108 aa23.57■■□□□ 1.36
VARS-221ENST00000463184 PRDM1O75626 825 aa23.57■■□□□ 1.36
VARS-221ENST00000463184 FDX1P10109 184 aa23.57■■□□□ 1.36
VARS-221ENST00000463184 CST5P28325 142 aaPredicted RBP23.57■■□□□ 1.36
VARS-221ENST00000463184 EPHB4P54760 987 aa23.57■■□□□ 1.36
VARS-221ENST00000463184 PCSK9Q8NBP7 692 aaKnown RBP23.57■■□□□ 1.36
VARS-221ENST00000463184 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.57■■□□□ 1.36
VARS-221ENST00000463184 ELP1O95163 1332 aa23.57■■□□□ 1.36
VARS-221ENST00000463184 M0R2C6 588 aa23.56■■□□□ 1.36
VARS-221ENST00000463184 TSHZ3Q63HK5 1081 aa23.56■■□□□ 1.36
VARS-221ENST00000463184 IFNL3Q8IZI9 196 aa23.56■■□□□ 1.36
VARS-221ENST00000463184 MAFAQ8NHW3 353 aaPredicted RBP23.56■■□□□ 1.36
VARS-221ENST00000463184 GLT1D1Q96MS3 346 aa23.56■■□□□ 1.36
VARS-221ENST00000463184 NACAP1Q9BZK3 213 aa23.56■■□□□ 1.36
VARS-221ENST00000463184 SPC25Q9HBM1 224 aa23.56■■□□□ 1.36
VARS-221ENST00000463184 MROH7Q68CQ1 1323 aa23.56■■□□□ 1.36
VARS-221ENST00000463184 PDE4BQ07343 736 aa23.55■■□□□ 1.36
VARS-221ENST00000463184 NEDD1Q8NHV4 660 aa23.55■■□□□ 1.36
VARS-221ENST00000463184 MYH4Q9Y623 1939 aa23.55■■□□□ 1.36
VARS-221ENST00000463184 TIMP1P01033 207 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms