RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 MFAP3LO75121 409 aa14.02□□□□□ -0.17
HDAC4-208ENST00000463007 EIF3JO75822 258 aaKnown RBP14.02□□□□□ -0.17
HDAC4-208ENST00000463007 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.02□□□□□ -0.17
HDAC4-208ENST00000463007 CRACR2BQ8N4Y2 399 aaPredicted RBP14.02□□□□□ -0.17
HDAC4-208ENST00000463007 CEP112Q8N8E3 955 aa14.02□□□□□ -0.17
HDAC4-208ENST00000463007 NSUN4Q96CB9 384 aaKnown RBP14.02□□□□□ -0.17
HDAC4-208ENST00000463007 PAGE5Q96GU1 130 aa14.02□□□□□ -0.17
HDAC4-208ENST00000463007 NAPGQ99747 312 aaPredicted RBP14.02□□□□□ -0.17
HDAC4-208ENST00000463007 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.02□□□□□ -0.17
HDAC4-208ENST00000463007 GDAQ9Y2T3 454 aa14.02□□□□□ -0.17
HDAC4-208ENST00000463007 A0A1B0GTH6 734 aa14.01□□□□□ -0.17
HDAC4-208ENST00000463007 MACROD2A1Z1Q3 448 aa14.01□□□□□ -0.17
HDAC4-208ENST00000463007 MAGEB6P1A0A0J9YX57 407 aa14.01□□□□□ -0.17
HDAC4-208ENST00000463007 PLEKHA8P1O95397 391 aa14.01□□□□□ -0.17
HDAC4-208ENST00000463007 BRD3Q15059 726 aa14.01□□□□□ -0.17
HDAC4-208ENST00000463007 KRT31Q15323 416 aa14.01□□□□□ -0.17
HDAC4-208ENST00000463007 SPATA1Q5VX52 437 aa14.01□□□□□ -0.17
HDAC4-208ENST00000463007 ZNF654Q8IZM8 581 aa14.01□□□□□ -0.17
HDAC4-208ENST00000463007 FANCBQ8NB91 859 aa14.01□□□□□ -0.17
HDAC4-208ENST00000463007 GOLGA5Q8TBA6 731 aa14.01□□□□□ -0.17
HDAC4-208ENST00000463007 RNF41Q9H4P4 317 aaPredicted RBP14.01□□□□□ -0.17
HDAC4-208ENST00000463007 JAG2Q9Y219 1238 aa14.01□□□□□ -0.17
HDAC4-208ENST00000463007 ZNF185O15231 689 aa14□□□□□ -0.17
HDAC4-208ENST00000463007 EXOC4Q96A65 974 aa14□□□□□ -0.17
HDAC4-208ENST00000463007 ADD3Q9UEY8 706 aaKnown RBP14□□□□□ -0.17
HDAC4-208ENST00000463007 SRP68Q9UHB9 627 aaKnown RBP14□□□□□ -0.17
HDAC4-208ENST00000463007 PTGDRQ13258 359 aa14□□□□□ -0.17
HDAC4-208ENST00000463007 CUL4BQ13620 913 aa14□□□□□ -0.17
HDAC4-208ENST00000463007 SRLQ86TD4 932 aa14□□□□□ -0.17
HDAC4-208ENST00000463007 ELOA2Q8IYF1 753 aaPredicted RBP14□□□□□ -0.17
HDAC4-208ENST00000463007 TMTC2Q8N394 836 aa14□□□□□ -0.17
HDAC4-208ENST00000463007 ENAHQ8N8S7 591 aaPredicted RBP14□□□□□ -0.17
HDAC4-208ENST00000463007 LRRC37AA6NMS7 1700 aa13.99□□□□□ -0.17
HDAC4-208ENST00000463007 CYP27A1Q02318 531 aa13.99□□□□□ -0.17
HDAC4-208ENST00000463007 EVX2Q03828 476 aa13.99□□□□□ -0.17
HDAC4-208ENST00000463007 PIK3AP1Q6ZUJ8 805 aa13.99□□□□□ -0.17
HDAC4-208ENST00000463007 FOXP1Q9H334 677 aaPredicted RBP13.99□□□□□ -0.17
HDAC4-208ENST00000463007 JADE2Q9NQC1 790 aa13.99□□□□□ -0.17
HDAC4-208ENST00000463007 L1RE1Q9UN81 338 aa13.99□□□□□ -0.17
HDAC4-208ENST00000463007 PCP11498 1178 aaKnown RBP13.99□□□□□ -0.17
HDAC4-208ENST00000463007 VEGFAP15692 232 aaPredicted RBP13.99□□□□□ -0.17
HDAC4-208ENST00000463007 DYNLL1P63167 89 aaKnown RBP13.99□□□□□ -0.17
HDAC4-208ENST00000463007 PKN1Q16512 942 aa13.99□□□□□ -0.17
HDAC4-208ENST00000463007 CCDC122Q5T0U0 273 aa13.99□□□□□ -0.17
HDAC4-208ENST00000463007 CTR9Q6PD62 1173 aa13.99□□□□□ -0.17
HDAC4-208ENST00000463007 KIAA1328Q86T90 577 aa13.99□□□□□ -0.17
HDAC4-208ENST00000463007 WASF1Q92558 559 aa13.99□□□□□ -0.17
HDAC4-208ENST00000463007 NYXQ9GZU5 481 aa13.99□□□□□ -0.17
HDAC4-208ENST00000463007 GNL3LQ9NVN8 582 aaKnown RBP13.99□□□□□ -0.17
HDAC4-208ENST00000463007 MYO6Q9UM54 1294 aa13.99□□□□□ -0.17
HDAC4-208ENST00000463007 SRPRBQ9Y5M8 271 aaKnown RBP13.99□□□□□ -0.17
HDAC4-208ENST00000463007 DUSP10Q9Y6W6 482 aa13.99□□□□□ -0.17
HDAC4-208ENST00000463007 TNKSO95271 1327 aa13.99□□□□□ -0.17
HDAC4-208ENST00000463007 NMT2O60551 498 aa13.99□□□□□ -0.17
HDAC4-208ENST00000463007 RASGRP4Q8TDF6 673 aa13.99□□□□□ -0.17
HDAC4-208ENST00000463007 UBXN6Q9BZV1 441 aa13.99□□□□□ -0.17
HDAC4-208ENST00000463007 EHD4Q9H223 541 aa13.99□□□□□ -0.17
HDAC4-208ENST00000463007 NAV1Q8NEY1 1877 aa13.98□□□□□ -0.17
HDAC4-208ENST00000463007 ATP8B1O43520 1251 aa13.98□□□□□ -0.17
HDAC4-208ENST00000463007 RNF40O75150 1001 aa13.98□□□□□ -0.17
HDAC4-208ENST00000463007 ZPR1O75312 459 aa13.98□□□□□ -0.17
HDAC4-208ENST00000463007 DEXIO95424 95 aa13.98□□□□□ -0.17
HDAC4-208ENST00000463007 SARSP49591 514 aaKnown RBP13.98□□□□□ -0.17
HDAC4-208ENST00000463007 RPS8P62241 208 aaKnown RBP13.98□□□□□ -0.17
HDAC4-208ENST00000463007 TMED8Q6PL24 325 aaPredicted RBP13.98□□□□□ -0.17
HDAC4-208ENST00000463007 MMS19Q96T76 1030 aa13.98□□□□□ -0.17
HDAC4-208ENST00000463007 TROAPQ12815 778 aa13.98□□□□□ -0.17
HDAC4-208ENST00000463007 PPP2R5BQ15173 497 aa13.98□□□□□ -0.17
HDAC4-208ENST00000463007 NPY5RQ15761 445 aa13.98□□□□□ -0.17
HDAC4-208ENST00000463007 CNGA4Q8IV77 575 aa13.98□□□□□ -0.17
HDAC4-208ENST00000463007 CCDC148Q8NFR7 591 aa13.98□□□□□ -0.17
HDAC4-208ENST00000463007 PANX2Q96RD6 677 aa13.98□□□□□ -0.17
HDAC4-208ENST00000463007 MKRN1Q9UHC7 482 aaKnown RBP13.98□□□□□ -0.17
HDAC4-208ENST00000463007 FAM170AA1A519 330 aa13.97□□□□□ -0.17
HDAC4-208ENST00000463007 MAP2K7O14733 419 aa13.97□□□□□ -0.17
HDAC4-208ENST00000463007 TOM1O60784 492 aa13.97□□□□□ -0.17
HDAC4-208ENST00000463007 ATP1A1P05023 1023 aaKnown RBP13.97□□□□□ -0.17
HDAC4-208ENST00000463007 IBSPP21815 317 aaPredicted RBP13.97□□□□□ -0.17
HDAC4-208ENST00000463007 MECOMQ03112 1051 aa13.97□□□□□ -0.17
HDAC4-208ENST00000463007 CAVIN4Q5BKX8 364 aa13.97□□□□□ -0.17
HDAC4-208ENST00000463007 NELFBQ8WX92 580 aa13.97□□□□□ -0.17
HDAC4-208ENST00000463007 RNF26Q9BY78 433 aaPredicted RBP13.97□□□□□ -0.17
HDAC4-208ENST00000463007 ABHD10Q9NUJ1 306 aa13.97□□□□□ -0.17
HDAC4-208ENST00000463007 CEP131Q9UPN4 1083 aa13.97□□□□□ -0.17
HDAC4-208ENST00000463007 FOCADQ5VW36 1801 aa13.97□□□□□ -0.17
HDAC4-208ENST00000463007 PP2D1A8MPX8 630 aa13.97□□□□□ -0.17
HDAC4-208ENST00000463007 ADAMTS3O15072 1205 aa13.97□□□□□ -0.17
HDAC4-208ENST00000463007 ORC4O43929 436 aa13.97□□□□□ -0.17
HDAC4-208ENST00000463007 CXCR5P32302 372 aa13.97□□□□□ -0.17
HDAC4-208ENST00000463007 E2F4Q16254 413 aa13.97□□□□□ -0.17
HDAC4-208ENST00000463007 TSR1Q2NL82 804 aaKnown RBP13.97□□□□□ -0.17
HDAC4-208ENST00000463007 SMCR8Q8TEV9 937 aaPredicted RBP13.97□□□□□ -0.17
HDAC4-208ENST00000463007 ZSCAN10Q96SZ4 725 aaPredicted RBP13.97□□□□□ -0.17
HDAC4-208ENST00000463007 SMARCAL1Q9NZC9 954 aa13.97□□□□□ -0.17
HDAC4-208ENST00000463007 EP400Q96L91 3159 aa13.97□□□□□ -0.17
HDAC4-208ENST00000463007 KCNJ18B7U540 433 aa13.97□□□□□ -0.17
HDAC4-208ENST00000463007 PPP1R3GB7ZBB8 358 aa13.97□□□□□ -0.17
HDAC4-208ENST00000463007 KLK7P49862 253 aa13.97□□□□□ -0.17
HDAC4-208ENST00000463007 KCNJ12Q14500 433 aa13.97□□□□□ -0.17
HDAC4-208ENST00000463007 APTXQ7Z2E3 356 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms