RNA–Protein interactions for RNA: ENST00000462817.5

LIMS1-211, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 4

Gene LIMS1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-211ENST00000462817 NR2E3Q9Y5X4 410 aa18.33■□□□□ 0.52
LIMS1-211ENST00000462817 NMT2O60551 498 aa18.32■□□□□ 0.52
LIMS1-211ENST00000462817 COBLO75128 1261 aa18.32■□□□□ 0.52
LIMS1-211ENST00000462817 MCCP23508 829 aa18.32■□□□□ 0.52
LIMS1-211ENST00000462817 PDE4AP27815 886 aa18.32■□□□□ 0.52
LIMS1-211ENST00000462817 OLFML2BQ68BL8 750 aa18.32■□□□□ 0.52
LIMS1-211ENST00000462817 UBE2Q1Q7Z7E8 422 aa18.32■□□□□ 0.52
LIMS1-211ENST00000462817 GMCL1Q96IK5 515 aa18.32■□□□□ 0.52
LIMS1-211ENST00000462817 NBPF3Q9H094 633 aa18.32■□□□□ 0.52
LIMS1-211ENST00000462817 ZNF214Q9UL59 606 aaPredicted RBP18.32■□□□□ 0.52
LIMS1-211ENST00000462817 COL11A1P12107 1806 aaPredicted RBP18.31■□□□□ 0.52
LIMS1-211ENST00000462817 PARP14Q460N5 1801 aa18.31■□□□□ 0.52
LIMS1-211ENST00000462817 EVI5O60447 810 aa18.31■□□□□ 0.52
LIMS1-211ENST00000462817 MSCO60682 206 aa18.31■□□□□ 0.52
LIMS1-211ENST00000462817 FDX1P10109 184 aa18.31■□□□□ 0.52
LIMS1-211ENST00000462817 PCP11498 1178 aaKnown RBP18.31■□□□□ 0.52
LIMS1-211ENST00000462817 CCDC96Q2M329 555 aa18.31■□□□□ 0.52
LIMS1-211ENST00000462817 AKNAD1Q5T1N1 836 aa18.31■□□□□ 0.52
LIMS1-211ENST00000462817 TTC22Q5TAA0 569 aa18.31■□□□□ 0.52
LIMS1-211ENST00000462817 FAM160B2Q86V87 743 aa18.31■□□□□ 0.52
LIMS1-211ENST00000462817 REPS2Q8NFH8 660 aa18.31■□□□□ 0.52
LIMS1-211ENST00000462817 DDX11Q96FC9 970 aa18.31■□□□□ 0.52
LIMS1-211ENST00000462817 RAVER2Q9HCJ3 691 aaKnown RBP18.31■□□□□ 0.52
LIMS1-211ENST00000462817 IL17RBQ9NRM6 502 aa18.31■□□□□ 0.52
LIMS1-211ENST00000462817 OGDHLQ9ULD0 1010 aa18.31■□□□□ 0.52
LIMS1-211ENST00000462817 FGRP09769 529 aa18.3■□□□□ 0.52
LIMS1-211ENST00000462817 DIS3LQ8TF46 1054 aaKnown RBP18.3■□□□□ 0.52
LIMS1-211ENST00000462817 STAG1Q8WVM7 1258 aa18.3■□□□□ 0.52
LIMS1-211ENST00000462817 ESR2Q92731 530 aa18.3■□□□□ 0.52
LIMS1-211ENST00000462817 C11orf49Q9H6J7 331 aa18.3■□□□□ 0.52
LIMS1-211ENST00000462817 DDX20Q9UHI6 824 aaKnown RBP18.3■□□□□ 0.52
LIMS1-211ENST00000462817 CTNNA3Q9UI47 895 aa18.3■□□□□ 0.52
LIMS1-211ENST00000462817 H0YGN5 161 aa18.29■□□□□ 0.52
LIMS1-211ENST00000462817 PGK2P07205 417 aa18.29■□□□□ 0.52
LIMS1-211ENST00000462817 TOP1P11387 765 aaKnown RBP18.29■□□□□ 0.52
LIMS1-211ENST00000462817 IMMTQ16891 758 aaKnown RBP18.29■□□□□ 0.52
LIMS1-211ENST00000462817 RCSD1Q6JBY9 416 aa18.29■□□□□ 0.52
LIMS1-211ENST00000462817 KCTD1Q719H9 257 aa18.29■□□□□ 0.52
LIMS1-211ENST00000462817 RUFY2Q8WXA3 655 aa18.29■□□□□ 0.52
LIMS1-211ENST00000462817 MAML3Q96JK9 1138 aa18.29■□□□□ 0.52
LIMS1-211ENST00000462817 DSCC1Q9BVC3 393 aa18.29■□□□□ 0.52
LIMS1-211ENST00000462817 SLC38A10Q9HBR0 1119 aa18.29■□□□□ 0.52
LIMS1-211ENST00000462817 FBXO40Q9UH90 709 aa18.29■□□□□ 0.52
LIMS1-211ENST00000462817 TACC3Q9Y6A5 838 aa18.29■□□□□ 0.52
LIMS1-211ENST00000462817 ZNF236Q9UL36 1845 aa18.28■□□□□ 0.52
LIMS1-211ENST00000462817 ATP2A1O14983 1001 aa18.28■□□□□ 0.52
LIMS1-211ENST00000462817 OAZ1P54368 228 aa18.28■□□□□ 0.52
LIMS1-211ENST00000462817 ANKRD35Q8N283 1001 aa18.28■□□□□ 0.52
LIMS1-211ENST00000462817 DCAF4Q8WV16 495 aa18.28■□□□□ 0.52
LIMS1-211ENST00000462817 TCP11L1Q9NUJ3 509 aa18.28■□□□□ 0.52
LIMS1-211ENST00000462817 GSPT1P15170 499 aaKnown RBP18.27■□□□□ 0.52
LIMS1-211ENST00000462817 LHX8Q68G74 356 aa18.27■□□□□ 0.52
LIMS1-211ENST00000462817 TBC1D10CQ8IV04 446 aa18.27■□□□□ 0.52
LIMS1-211ENST00000462817 TTC14Q96N46 770 aa18.27■□□□□ 0.52
LIMS1-211ENST00000462817 TMEM47Q9BQJ4 181 aa18.27■□□□□ 0.52
LIMS1-211ENST00000462817 HOMER2Q9NSB8 354 aa18.27■□□□□ 0.52
LIMS1-211ENST00000462817 DIS3Q9Y2L1 958 aaKnown RBP18.27■□□□□ 0.52
LIMS1-211ENST00000462817 RIPK3Q9Y572 518 aa18.27■□□□□ 0.52
LIMS1-211ENST00000462817 ZNFX1Q9P2E3 1918 aaKnown RBP18.26■□□□□ 0.51
LIMS1-211ENST00000462817 MYCNP04198 464 aaPredicted RBP18.26■□□□□ 0.51
LIMS1-211ENST00000462817 CYBAP13498 195 aa18.26■□□□□ 0.51
LIMS1-211ENST00000462817 NT5C2P49902 561 aa18.26■□□□□ 0.51
LIMS1-211ENST00000462817 CCDC178Q5BJE1 867 aa18.26■□□□□ 0.51
LIMS1-211ENST00000462817 PRAMEF19Q5SWL8 479 aa18.26■□□□□ 0.51
LIMS1-211ENST00000462817 CCDC174Q6PII3 467 aa18.26■□□□□ 0.51
LIMS1-211ENST00000462817 IQCA1Q86XH1 822 aa18.26■□□□□ 0.51
LIMS1-211ENST00000462817 CHST13Q8NET6 341 aa18.26■□□□□ 0.51
LIMS1-211ENST00000462817 TINF2Q9BSI4 451 aa18.26■□□□□ 0.51
LIMS1-211ENST00000462817 CEP290O15078 2479 aa18.25■□□□□ 0.51
LIMS1-211ENST00000462817 SEPT4O43236 478 aa18.25■□□□□ 0.51
LIMS1-211ENST00000462817 PLA2G6O60733 806 aa18.25■□□□□ 0.51
LIMS1-211ENST00000462817 ZNF792Q3KQV3 632 aa18.25■□□□□ 0.51
LIMS1-211ENST00000462817 ARRDC4Q8NCT1 418 aa18.25■□□□□ 0.51
LIMS1-211ENST00000462817 TRPV1Q8NER1 839 aa18.25■□□□□ 0.51
LIMS1-211ENST00000462817 ZKSCAN3Q9BRR0 538 aa18.25■□□□□ 0.51
LIMS1-211ENST00000462817 CNPY2Q9Y2B0 182 aa18.25■□□□□ 0.51
LIMS1-211ENST00000462817 NEDD4P46934 1319 aa18.24■□□□□ 0.51
LIMS1-211ENST00000462817 KDM4AO75164 1064 aa18.24■□□□□ 0.51
LIMS1-211ENST00000462817 NOVP48745 357 aa18.24■□□□□ 0.51
LIMS1-211ENST00000462817 ANO1Q5XXA6 986 aa18.24■□□□□ 0.51
LIMS1-211ENST00000462817 ACAD9Q9H845 621 aa18.24■□□□□ 0.51
LIMS1-211ENST00000462817 GPCPD1Q9NPB8 672 aa18.24■□□□□ 0.51
LIMS1-211ENST00000462817 PRR12Q9ULL5 1215 aa18.24■□□□□ 0.51
LIMS1-211ENST00000462817 FRMPD2Q68DX3 1309 aaPredicted RBP18.23■□□□□ 0.51
LIMS1-211ENST00000462817 RAD50Q92878 1312 aa18.23■□□□□ 0.51
LIMS1-211ENST00000462817 KBTBD13C9JR72 458 aa18.23■□□□□ 0.51
LIMS1-211ENST00000462817 ALAS1P13196 640 aa18.23■□□□□ 0.51
LIMS1-211ENST00000462817 SNAP25P60880 206 aa18.23■□□□□ 0.51
LIMS1-211ENST00000462817 TKFCQ3LXA3 575 aa18.23■□□□□ 0.51
LIMS1-211ENST00000462817 C7orf61Q8IZ16 206 aa18.23■□□□□ 0.51
LIMS1-211ENST00000462817 AGBL1Q96MI9 1066 aa18.23■□□□□ 0.51
LIMS1-211ENST00000462817 KRT23Q9C075 422 aa18.23■□□□□ 0.51
LIMS1-211ENST00000462817 SENP6Q9GZR1 1112 aaPredicted RBP18.23■□□□□ 0.51
LIMS1-211ENST00000462817 CNNM2Q9H8M5 875 aa18.23■□□□□ 0.51
LIMS1-211ENST00000462817 RNF146Q9NTX7 359 aa18.23■□□□□ 0.51
LIMS1-211ENST00000462817 NRBP1Q9UHY1 535 aa18.23■□□□□ 0.51
LIMS1-211ENST00000462817 B4E1Z4 1266 aa18.22■□□□□ 0.51
LIMS1-211ENST00000462817 IGHA2P01877 340 aa18.22■□□□□ 0.51
LIMS1-211ENST00000462817 CHMLP26374 656 aa18.22■□□□□ 0.51
LIMS1-211ENST00000462817 SLC16A2P36021 539 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms