RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 EMILIN3Q9NT22 766 aa20.83■□□□□ 0.92
ATPAF2-202ENST00000462733 PARP1P09874 1014 aaKnown RBP20.82■□□□□ 0.92
ATPAF2-202ENST00000462733 TERF1P54274 439 aa20.82■□□□□ 0.92
ATPAF2-202ENST00000462733 GRM4Q14833 912 aa20.82■□□□□ 0.92
ATPAF2-202ENST00000462733 RGMBQ6NW40 437 aa20.82■□□□□ 0.92
ATPAF2-202ENST00000462733 KCTD1Q719H9 257 aa20.82■□□□□ 0.92
ATPAF2-202ENST00000462733 GTF3C6Q969F1 213 aa20.82■□□□□ 0.92
ATPAF2-202ENST00000462733 BAZ2BQ9UIF8 2168 aaKnown RBP20.81■□□□□ 0.92
ATPAF2-202ENST00000462733 C19orf81C9J6K1 198 aa20.81■□□□□ 0.92
ATPAF2-202ENST00000462733 CDC27P30260 824 aa20.81■□□□□ 0.92
ATPAF2-202ENST00000462733 APLP1P51693 650 aa20.81■□□□□ 0.92
ATPAF2-202ENST00000462733 STAG2Q8N3U4 1231 aa20.81■□□□□ 0.92
ATPAF2-202ENST00000462733 RNF214Q8ND24 703 aa20.81■□□□□ 0.92
ATPAF2-202ENST00000462733 DCAF4Q8WV16 495 aa20.81■□□□□ 0.92
ATPAF2-202ENST00000462733 SCAND2PQ9GZW5 306 aaPredicted RBP20.81■□□□□ 0.92
ATPAF2-202ENST00000462733 GPCPD1Q9NPB8 672 aa20.81■□□□□ 0.92
ATPAF2-202ENST00000462733 TMOD4Q9NZQ9 345 aa20.81■□□□□ 0.92
ATPAF2-202ENST00000462733 CXCL11O14625 94 aa20.81■□□□□ 0.92
ATPAF2-202ENST00000462733 TPM2P07951 284 aa20.81■□□□□ 0.92
ATPAF2-202ENST00000462733 SNHG28P0DPA3 235 aa20.81■□□□□ 0.92
ATPAF2-202ENST00000462733 ADD1P35611 737 aaKnown RBP20.81■□□□□ 0.92
ATPAF2-202ENST00000462733 RCAN1P53805 252 aa20.81■□□□□ 0.92
ATPAF2-202ENST00000462733 FAM83BQ5T0W9 1011 aa20.81■□□□□ 0.92
ATPAF2-202ENST00000462733 CMTR1Q8N1G2 835 aaKnown RBP20.81■□□□□ 0.92
ATPAF2-202ENST00000462733 GMCL1Q96IK5 515 aa20.81■□□□□ 0.92
ATPAF2-202ENST00000462733 LLPHQ9BRT6 129 aaKnown RBP20.81■□□□□ 0.92
ATPAF2-202ENST00000462733 MAD2L2Q9UI95 211 aa20.81■□□□□ 0.92
ATPAF2-202ENST00000462733 KCNH4Q9UQ05 1017 aa20.81■□□□□ 0.92
ATPAF2-202ENST00000462733 DTNBO60941 627 aa20.8■□□□□ 0.92
ATPAF2-202ENST00000462733 BMP3P12645 472 aa20.8■□□□□ 0.92
ATPAF2-202ENST00000462733 KIF5BP33176 963 aa20.8■□□□□ 0.92
ATPAF2-202ENST00000462733 SPRYD7Q5W111 196 aa20.8■□□□□ 0.92
ATPAF2-202ENST00000462733 GADL1Q6ZQY3 521 aa20.8■□□□□ 0.92
ATPAF2-202ENST00000462733 PAXIP1Q6ZW49 1069 aaPredicted RBP20.8■□□□□ 0.92
ATPAF2-202ENST00000462733 RASAL3Q86YV0 1011 aa20.8■□□□□ 0.92
ATPAF2-202ENST00000462733 LPAR1Q92633 364 aa20.8■□□□□ 0.92
ATPAF2-202ENST00000462733 MAP3K14Q99558 947 aa20.8■□□□□ 0.92
ATPAF2-202ENST00000462733 FAM217BQ9NTX9 383 aaPredicted RBP20.8■□□□□ 0.92
ATPAF2-202ENST00000462733 VCAM1P19320 739 aa20.79■□□□□ 0.92
ATPAF2-202ENST00000462733 ZNF543Q08ER8 600 aa20.79■□□□□ 0.92
ATPAF2-202ENST00000462733 TTBK2Q6IQ55 1244 aa20.79■□□□□ 0.92
ATPAF2-202ENST00000462733 CCDC82Q8N4S0 544 aa20.79■□□□□ 0.92
ATPAF2-202ENST00000462733 FUCA2Q9BTY2 467 aa20.79■□□□□ 0.92
ATPAF2-202ENST00000462733 RBM28Q9NW13 759 aaKnown RBP20.79■□□□□ 0.92
ATPAF2-202ENST00000462733 A0A0G2JLL6 359 aaPredicted RBP20.78■□□□□ 0.92
ATPAF2-202ENST00000462733 CCDC196A0A1B0GTZ2 297 aa20.78■□□□□ 0.92
ATPAF2-202ENST00000462733 PALM3A6NDB9 673 aaPredicted RBP20.78■□□□□ 0.92
ATPAF2-202ENST00000462733 CPLX1O14810 134 aa20.78■□□□□ 0.92
ATPAF2-202ENST00000462733 PPFIA3O75145 1194 aa20.78■□□□□ 0.92
ATPAF2-202ENST00000462733 PLEKHA8P1O95397 391 aa20.78■□□□□ 0.92
ATPAF2-202ENST00000462733 SNAPC2Q13487 334 aa20.78■□□□□ 0.92
ATPAF2-202ENST00000462733 ASPRV1Q53RT3 343 aa20.78■□□□□ 0.92
ATPAF2-202ENST00000462733 SH3D19Q5HYK7 790 aa20.78■□□□□ 0.92
ATPAF2-202ENST00000462733 PRRT2Q7Z6L0 340 aaPredicted RBP20.78■□□□□ 0.92
ATPAF2-202ENST00000462733 C12orf42Q96LP6 360 aa20.78■□□□□ 0.92
ATPAF2-202ENST00000462733 CPVLQ9H3G5 476 aa20.78■□□□□ 0.92
ATPAF2-202ENST00000462733 CREBZFQ9NS37 354 aa20.78■□□□□ 0.92
ATPAF2-202ENST00000462733 NID2Q14112 1375 aa20.78■□□□□ 0.92
ATPAF2-202ENST00000462733 KLRF2D3W0D1 207 aa20.78■□□□□ 0.92
ATPAF2-202ENST00000462733 ZBTB48P10074 688 aaPredicted RBP20.78■□□□□ 0.92
ATPAF2-202ENST00000462733 GRM1Q13255 1194 aa20.78■□□□□ 0.92
ATPAF2-202ENST00000462733 GPATCH4Q5T3I0 446 aaKnown RBP20.78■□□□□ 0.92
ATPAF2-202ENST00000462733 UBA5Q9GZZ9 404 aa20.78■□□□□ 0.92
ATPAF2-202ENST00000462733 RPAP3Q9H6T3 665 aaPredicted RBP20.78■□□□□ 0.92
ATPAF2-202ENST00000462733 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.78■□□□□ 0.92
ATPAF2-202ENST00000462733 TMEM232C9JQI7 657 aa20.77■□□□□ 0.92
ATPAF2-202ENST00000462733 WDR46O15213 610 aaKnown RBP20.77■□□□□ 0.92
ATPAF2-202ENST00000462733 SLC16A2P36021 539 aa20.77■□□□□ 0.92
ATPAF2-202ENST00000462733 IKQ13123 557 aaPredicted RBP20.77■□□□□ 0.92
ATPAF2-202ENST00000462733 PPP2R5BQ15173 497 aa20.77■□□□□ 0.92
ATPAF2-202ENST00000462733 SAMD1Q6SPF0 538 aaPredicted RBP20.77■□□□□ 0.92
ATPAF2-202ENST00000462733 TANGO6Q9C0B7 1094 aa20.77■□□□□ 0.92
ATPAF2-202ENST00000462733 DHX16O60231 1041 aaKnown RBP20.76■□□□□ 0.91
ATPAF2-202ENST00000462733 SLC10A3P09131 477 aa20.76■□□□□ 0.91
ATPAF2-202ENST00000462733 GNAQP50148 359 aa20.76■□□□□ 0.91
ATPAF2-202ENST00000462733 GTF2A2P52657 109 aa20.76■□□□□ 0.91
ATPAF2-202ENST00000462733 TREML2Q5T2D2 321 aa20.76■□□□□ 0.91
ATPAF2-202ENST00000462733 TMTC3Q6ZXV5 915 aa20.76■□□□□ 0.91
ATPAF2-202ENST00000462733 NBPF11Q86T75 865 aa20.76■□□□□ 0.91
ATPAF2-202ENST00000462733 SRBD1Q8N5C6 995 aaKnown RBP20.76■□□□□ 0.91
ATPAF2-202ENST00000462733 KIF3AQ9Y496 699 aa20.76■□□□□ 0.91
ATPAF2-202ENST00000462733 CYP4F22Q6NT55 531 aa20.75■□□□□ 0.91
ATPAF2-202ENST00000462733 CPLX2Q6PUV4 134 aaKnown RBP20.75■□□□□ 0.91
ATPAF2-202ENST00000462733 HHIPL1Q96JK4 782 aa20.75■□□□□ 0.91
ATPAF2-202ENST00000462733 MS4A4AQ96JQ5 239 aa20.75■□□□□ 0.91
ATPAF2-202ENST00000462733 ZSCAN16Q9H4T2 348 aaPredicted RBP20.75■□□□□ 0.91
ATPAF2-202ENST00000462733 LOC285556D6RIA3 1793 aa20.75■□□□□ 0.91
ATPAF2-202ENST00000462733 CCL15-CCL14A0A0B4J2E2 113 aa20.75■□□□□ 0.91
ATPAF2-202ENST00000462733 CTDNEP1O95476 244 aa20.75■□□□□ 0.91
ATPAF2-202ENST00000462733 CCL15Q16663 113 aa20.75■□□□□ 0.91
ATPAF2-202ENST00000462733 FASTKD5Q7L8L6 764 aaKnown RBP20.75■□□□□ 0.91
ATPAF2-202ENST00000462733 PROCA1Q8NCQ7 364 aaPredicted RBP20.75■□□□□ 0.91
ATPAF2-202ENST00000462733 SMARCC2Q8TAQ2 1214 aa20.75■□□□□ 0.91
ATPAF2-202ENST00000462733 PIBF1Q8WXW3 757 aa20.75■□□□□ 0.91
ATPAF2-202ENST00000462733 PHKBQ93100 1093 aa20.75■□□□□ 0.91
ATPAF2-202ENST00000462733 CCDC102AQ96A19 550 aa20.75■□□□□ 0.91
ATPAF2-202ENST00000462733 VAT1LQ9HCJ6 419 aa20.75■□□□□ 0.91
ATPAF2-202ENST00000462733 JAK2O60674 1132 aa20.74■□□□□ 0.91
ATPAF2-202ENST00000462733 PTMAP06454 111 aaKnown RBP20.74■□□□□ 0.91
ATPAF2-202ENST00000462733 CCDC192P0DO97 292 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms