RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 FANCD2OSQ96PS1 177 aa7.03□□□□□ -1.28
COPS3-204ENST00000462236 YIPF2Q9BWQ6 316 aa7.03□□□□□ -1.28
COPS3-204ENST00000462236 DISC1Q9NRI5 854 aa7.03□□□□□ -1.28
COPS3-204ENST00000462236 KIAA0232Q92628 1395 aa7.03□□□□□ -1.28
COPS3-204ENST00000462236 ATP7BP35670 1465 aa7.03□□□□□ -1.28
COPS3-204ENST00000462236 BCL9O00512 1426 aa7.02□□□□□ -1.29
COPS3-204ENST00000462236 LOC100996750A0A140TA64 210 aa7.02□□□□□ -1.29
COPS3-204ENST00000462236 PLSCR1O15162 318 aa7.02□□□□□ -1.29
COPS3-204ENST00000462236 RASSF7Q02833 373 aa7.02□□□□□ -1.29
COPS3-204ENST00000462236 ZBTB37Q5TC79 503 aa7.02□□□□□ -1.29
COPS3-204ENST00000462236 AGGF1Q8N302 714 aaeCLIP7.02□□□□□ -1.29
COPS3-204ENST00000462236 FBXO27Q8NI29 283 aa7.02□□□□□ -1.29
COPS3-204ENST00000462236 ZNF507Q8TCN5 953 aa7.02□□□□□ -1.29
COPS3-204ENST00000462236 KRTAP4-6Q9BYQ5 205 aa7.02□□□□□ -1.29
COPS3-204ENST00000462236 WNT10AQ9GZT5 417 aa7.02□□□□□ -1.29
COPS3-204ENST00000462236 AP4E1Q9UPM8 1137 aa7.02□□□□□ -1.29
COPS3-204ENST00000462236 CPDO75976 1380 aa7.01□□□□□ -1.29
COPS3-204ENST00000462236 GPRASP1Q5JY77 1395 aa7.01□□□□□ -1.29
COPS3-204ENST00000462236 MAP3K5Q99683 1374 aa7.01□□□□□ -1.29
COPS3-204ENST00000462236 DCDC2CA8MYV0 355 aa7.01□□□□□ -1.29
COPS3-204ENST00000462236 TLR3O15455 904 aaKnown RBP7.01□□□□□ -1.29
COPS3-204ENST00000462236 GAS2O43903 313 aaKnown RBP7.01□□□□□ -1.29
COPS3-204ENST00000462236 ALX3O95076 343 aa7.01□□□□□ -1.29
COPS3-204ENST00000462236 CAP2P40123 477 aa7.01□□□□□ -1.29
COPS3-204ENST00000462236 ASPAP45381 313 aa7.01□□□□□ -1.29
COPS3-204ENST00000462236 LRRFIP1Q32MZ4 808 aaKnown RBP7.01□□□□□ -1.29
COPS3-204ENST00000462236 TMEM201Q5SNT2 666 aa7.01□□□□□ -1.29
COPS3-204ENST00000462236 DYMQ7RTS9 669 aa7.01□□□□□ -1.29
COPS3-204ENST00000462236 CD163Q86VB7 1156 aa7.01□□□□□ -1.29
COPS3-204ENST00000462236 PDGFDQ9GZP0 370 aaPredicted RBP7.01□□□□□ -1.29
COPS3-204ENST00000462236 PIDD1Q9HB75 910 aa7.01□□□□□ -1.29
COPS3-204ENST00000462236 BRMS1Q9HCU9 246 aa7.01□□□□□ -1.29
COPS3-204ENST00000462236 PRDM11Q9NQV5 511 aa7.01□□□□□ -1.29
COPS3-204ENST00000462236 GINM1Q9NU53 330 aa7.01□□□□□ -1.29
COPS3-204ENST00000462236 PPP1R1BQ9UD71 204 aaPredicted RBP7.01□□□□□ -1.29
COPS3-204ENST00000462236 EFR3BQ9Y2G0 817 aa7.01□□□□□ -1.29
COPS3-204ENST00000462236 ACTL7BQ9Y614 415 aa7.01□□□□□ -1.29
COPS3-204ENST00000462236 AATKQ6ZMQ8 1374 aa7□□□□□ -1.29
COPS3-204ENST00000462236 BTAF1O14981 1849 aa7□□□□□ -1.29
COPS3-204ENST00000462236 C1QTNF9BB2RNN3 333 aa7□□□□□ -1.29
COPS3-204ENST00000462236 FGRP09769 529 aa7□□□□□ -1.29
COPS3-204ENST00000462236 DRD2P14416 443 aa7□□□□□ -1.29
COPS3-204ENST00000462236 PREPP48147 710 aa7□□□□□ -1.29
COPS3-204ENST00000462236 GSK3AP49840 483 aa7□□□□□ -1.29
COPS3-204ENST00000462236 C12orf40Q86WS4 652 aa7□□□□□ -1.29
COPS3-204ENST00000462236 RBBP8NLQ8NC74 664 aaPredicted RBP7□□□□□ -1.29
COPS3-204ENST00000462236 OR6P1Q8NGX9 317 aa7□□□□□ -1.29
COPS3-204ENST00000462236 EZH1Q92800 747 aaPredicted RBP7□□□□□ -1.29
COPS3-204ENST00000462236 MYRFLQ96LU7 910 aa7□□□□□ -1.29
COPS3-204ENST00000462236 DRC1Q96MC2 740 aa7□□□□□ -1.29
COPS3-204ENST00000462236 PRAM1Q96QH2 718 aa7□□□□□ -1.29
COPS3-204ENST00000462236 UBL7Q96S82 380 aaPredicted RBP7□□□□□ -1.29
COPS3-204ENST00000462236 SSBP4Q9BWG4 385 aaPredicted RBP7□□□□□ -1.29
COPS3-204ENST00000462236 PICK1Q9NRD5 415 aa7□□□□□ -1.29
COPS3-204ENST00000462236 ZNRF3Q9ULT6 936 aa7□□□□□ -1.29
COPS3-204ENST00000462236 POLR3KQ9Y2Y1 108 aaPredicted RBP7□□□□□ -1.29
COPS3-204ENST00000462236 OVOS2A0A0G2JMS6 1433 aa7□□□□□ -1.29
COPS3-204ENST00000462236 OVOS2A0A0J9YW53 1432 aa7□□□□□ -1.29
COPS3-204ENST00000462236 OVOS2Q6IE36 1432 aa7□□□□□ -1.29
COPS3-204ENST00000462236 NHSQ6T4R5 1651 aa7□□□□□ -1.29
COPS3-204ENST00000462236 COL5A2P05997 1499 aaPredicted RBP6.99□□□□□ -1.29
COPS3-204ENST00000462236 POLR3AO14802 1390 aaPredicted RBP6.99□□□□□ -1.29
COPS3-204ENST00000462236 EIF3AQ14152 1382 aaKnown RBP6.99□□□□□ -1.29
COPS3-204ENST00000462236 MCM4P33991 863 aa6.99□□□□□ -1.29
COPS3-204ENST00000462236 NTF4P34130 210 aa6.99□□□□□ -1.29
COPS3-204ENST00000462236 CHRNA4P43681 627 aa6.99□□□□□ -1.29
COPS3-204ENST00000462236 GATA4P43694 442 aa6.99□□□□□ -1.29
COPS3-204ENST00000462236 CDK8P49336 464 aa6.99□□□□□ -1.29
COPS3-204ENST00000462236 USP11P51784 963 aa6.99□□□□□ -1.29
COPS3-204ENST00000462236 CHRNA2Q15822 529 aa6.99□□□□□ -1.29
COPS3-204ENST00000462236 PPM1JQ5JR12 505 aa6.99□□□□□ -1.29
COPS3-204ENST00000462236 HID1Q8IV36 788 aa6.99□□□□□ -1.29
COPS3-204ENST00000462236 TMEM151AQ8N4L1 468 aa6.99□□□□□ -1.29
COPS3-204ENST00000462236 TCP11L2Q8N4U5 519 aa6.99□□□□□ -1.29
COPS3-204ENST00000462236 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.99□□□□□ -1.294e-9■□□□□ 11.1
COPS3-204ENST00000462236 SYT17Q9BSW7 474 aa6.99□□□□□ -1.29
COPS3-204ENST00000462236 ACSS3Q9H6R3 686 aa6.99□□□□□ -1.29
COPS3-204ENST00000462236 PRKAG2Q9UGJ0 569 aa6.99□□□□□ -1.29
COPS3-204ENST00000462236 PCOLCE2Q9UKZ9 415 aa6.99□□□□□ -1.29
COPS3-204ENST00000462236 THRAP3Q9Y2W1 955 aaKnown RBP6.99□□□□□ -1.29
COPS3-204ENST00000462236 PCDHB14Q9Y5E9 798 aa6.99□□□□□ -1.29
COPS3-204ENST00000462236 USP19O94966 1318 aa6.99□□□□□ -1.29
COPS3-204ENST00000462236 PRAMEF27A3QJZ7 478 aa6.98□□□□□ -1.29
COPS3-204ENST00000462236 MEIS3P2A8K0S8 358 aa6.98□□□□□ -1.29
COPS3-204ENST00000462236 DHX15O43143 795 aaKnown RBP6.98□□□□□ -1.29
COPS3-204ENST00000462236 HTR3BO95264 441 aa6.98□□□□□ -1.29
COPS3-204ENST00000462236 ATP2B1P20020 1258 aa6.98□□□□□ -1.29
COPS3-204ENST00000462236 DNAJA1P31689 397 aaKnown RBP6.98□□□□□ -1.29
COPS3-204ENST00000462236 GRK4P32298 578 aa6.98□□□□□ -1.29
COPS3-204ENST00000462236 NASPP49321 788 aaPredicted RBP6.98□□□□□ -1.29
COPS3-204ENST00000462236 ETF1P62495 437 aaKnown RBP6.98□□□□□ -1.29
COPS3-204ENST00000462236 MAP7Q14244 749 aa6.98□□□□□ -1.29
COPS3-204ENST00000462236 TTLL4Q14679 1199 aa6.98□□□□□ -1.29
COPS3-204ENST00000462236 RGL3Q3MIN7 710 aa6.98□□□□□ -1.29
COPS3-204ENST00000462236 CDC37L1Q7L3B6 337 aa6.98□□□□□ -1.29
COPS3-204ENST00000462236 MCF2L2Q86YR7 1114 aa6.98□□□□□ -1.29
COPS3-204ENST00000462236 SMYD4Q8IYR2 804 aaPredicted RBP6.98□□□□□ -1.29
COPS3-204ENST00000462236 UTP4Q969X6 686 aaKnown RBP6.98□□□□□ -1.29
COPS3-204ENST00000462236 MEGF10Q96KG7 1140 aa6.98□□□□□ -1.29
COPS3-204ENST00000462236 SRRTQ9BXP5 876 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms