RNA–Protein interactions for RNA: ENST00000461871.1

GTF3C5-208, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 3

Gene GTF3C5, Length 623 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-208ENST00000461871 STXBP3O00186 592 aa16.19■□□□□ 0.18
GTF3C5-208ENST00000461871 NDUFB10O96000 172 aa16.19■□□□□ 0.18
GTF3C5-208ENST00000461871 GOLGA8HP0CJ92 632 aa16.19■□□□□ 0.18
GTF3C5-208ENST00000461871 ORC2Q13416 577 aaPredicted RBP16.19■□□□□ 0.18
GTF3C5-208ENST00000461871 CCDC96Q2M329 555 aa16.19■□□□□ 0.18
GTF3C5-208ENST00000461871 SLC35G1Q2M3R5 365 aa16.19■□□□□ 0.18
GTF3C5-208ENST00000461871 ADALQ6DHV7 355 aa16.19■□□□□ 0.18
GTF3C5-208ENST00000461871 SCYL3Q8IZE3 742 aa16.19■□□□□ 0.18
GTF3C5-208ENST00000461871 TNFRSF25Q93038 417 aa16.19■□□□□ 0.18
GTF3C5-208ENST00000461871 USP28Q96RU2 1077 aa16.19■□□□□ 0.18
GTF3C5-208ENST00000461871 GJB4Q9NTQ9 266 aa16.19■□□□□ 0.18
GTF3C5-208ENST00000461871 KCNJ14Q9UNX9 436 aa16.19■□□□□ 0.18
GTF3C5-208ENST00000461871 MYH15Q9Y2K3 1946 aa16.19■□□□□ 0.18
GTF3C5-208ENST00000461871 A0A1W2PRG0 241 aa16.18■□□□□ 0.18
GTF3C5-208ENST00000461871 C19orf81C9J6K1 198 aa16.18■□□□□ 0.18
GTF3C5-208ENST00000461871 SPTLC2O15270 562 aa16.18■□□□□ 0.18
GTF3C5-208ENST00000461871 HSPA6P17066 643 aa16.18■□□□□ 0.18
GTF3C5-208ENST00000461871 EPHX2P34913 555 aa16.18■□□□□ 0.18
GTF3C5-208ENST00000461871 NPY5RQ15761 445 aa16.18■□□□□ 0.18
GTF3C5-208ENST00000461871 FOXD4L6Q3SYB3 417 aaPredicted RBP16.18■□□□□ 0.18
GTF3C5-208ENST00000461871 WWC2Q6AWC2 1192 aa16.18■□□□□ 0.18
GTF3C5-208ENST00000461871 FAM173BQ6P4H8 233 aa16.18■□□□□ 0.18
GTF3C5-208ENST00000461871 FOXD4L3Q6VB84 417 aaPredicted RBP16.18■□□□□ 0.18
GTF3C5-208ENST00000461871 KLRG1Q96E93 195 aa16.18■□□□□ 0.18
GTF3C5-208ENST00000461871 PIGSQ96S52 555 aa16.18■□□□□ 0.18
GTF3C5-208ENST00000461871 UBA5Q9GZZ9 404 aa16.18■□□□□ 0.18
GTF3C5-208ENST00000461871 GPCPD1Q9NPB8 672 aa16.18■□□□□ 0.18
GTF3C5-208ENST00000461871 FEM1BQ9UK73 627 aa16.18■□□□□ 0.18
GTF3C5-208ENST00000461871 UBE2Q2LH0YL09 131 aa16.17■□□□□ 0.18
GTF3C5-208ENST00000461871 M0R2N6 131 aa16.17■□□□□ 0.18
GTF3C5-208ENST00000461871 PPP1R12BO60237 982 aaPredicted RBP16.17■□□□□ 0.18
GTF3C5-208ENST00000461871 SLURP2P0DP57 97 aa16.17■□□□□ 0.18
GTF3C5-208ENST00000461871 MRPL12P52815 198 aaKnown RBP16.17■□□□□ 0.18
GTF3C5-208ENST00000461871 FOSBP53539 338 aa16.17■□□□□ 0.18
GTF3C5-208ENST00000461871 STK38Q15208 465 aa16.17■□□□□ 0.18
GTF3C5-208ENST00000461871 KRT25Q7Z3Z0 450 aa16.17■□□□□ 0.18
GTF3C5-208ENST00000461871 HEATR3Q7Z4Q2 680 aa16.17■□□□□ 0.18
GTF3C5-208ENST00000461871 CLEC10AQ8IUN9 316 aa16.17■□□□□ 0.18
GTF3C5-208ENST00000461871 MAF1Q9H063 256 aa16.17■□□□□ 0.18
GTF3C5-208ENST00000461871 PICK1Q9NRD5 415 aa16.17■□□□□ 0.18
GTF3C5-208ENST00000461871 ASTN2O75129 1339 aaPredicted RBP16.17■□□□□ 0.18
GTF3C5-208ENST00000461871 BAZ2BQ9UIF8 2168 aaKnown RBP16.16■□□□□ 0.18
GTF3C5-208ENST00000461871 TRIM75PA6NK02 468 aa16.16■□□□□ 0.18
GTF3C5-208ENST00000461871 USP17L10C9JJH3 530 aa16.16■□□□□ 0.18
GTF3C5-208ENST00000461871 WDR46O15213 610 aaKnown RBP16.16■□□□□ 0.18
GTF3C5-208ENST00000461871 NF2P35240 595 aa16.16■□□□□ 0.18
GTF3C5-208ENST00000461871 STAT2P52630 851 aa16.16■□□□□ 0.18
GTF3C5-208ENST00000461871 NAPAP54920 295 aa16.16■□□□□ 0.18
GTF3C5-208ENST00000461871 SF3A1Q15459 793 aaKnown RBP16.16■□□□□ 0.18
GTF3C5-208ENST00000461871 SYDE2Q5VT97 1194 aa16.16■□□□□ 0.18
GTF3C5-208ENST00000461871 KCTD1Q719H9 257 aa16.16■□□□□ 0.18
GTF3C5-208ENST00000461871 CDAN1Q8IWY9 1227 aa16.16■□□□□ 0.18
GTF3C5-208ENST00000461871 ZNF579Q8NAF0 562 aaKnown RBP16.16■□□□□ 0.18
GTF3C5-208ENST00000461871 RBM46Q8TBY0 533 aaKnown RBP16.16■□□□□ 0.18
GTF3C5-208ENST00000461871 GPT2Q8TD30 523 aa16.16■□□□□ 0.18
GTF3C5-208ENST00000461871 GDPD2Q9HCC8 539 aa16.16■□□□□ 0.18
GTF3C5-208ENST00000461871 PCDH10Q9P2E7 1040 aa16.16■□□□□ 0.18
GTF3C5-208ENST00000461871 MTMR7Q9Y216 660 aa16.16■□□□□ 0.18
GTF3C5-208ENST00000461871 FRMPD2Q68DX3 1309 aaPredicted RBP16.16■□□□□ 0.18
GTF3C5-208ENST00000461871 hCG_1642624A0A1W2PR95 340 aa16.15■□□□□ 0.18
GTF3C5-208ENST00000461871 SMCO2A6NFE2 343 aa16.15■□□□□ 0.18
GTF3C5-208ENST00000461871 TMEM232C9JQI7 657 aa16.15■□□□□ 0.18
GTF3C5-208ENST00000461871 MAP3K9P80192 1104 aa16.15■□□□□ 0.18
GTF3C5-208ENST00000461871 PTPAQ15257 358 aa16.15■□□□□ 0.18
GTF3C5-208ENST00000461871 MAP3K11Q16584 847 aa16.15■□□□□ 0.18
GTF3C5-208ENST00000461871 TTBK2Q6IQ55 1244 aa16.15■□□□□ 0.18
GTF3C5-208ENST00000461871 SAMD3Q8N6K7 520 aa16.15■□□□□ 0.18
GTF3C5-208ENST00000461871 ACER1Q8TDN7 264 aa16.15■□□□□ 0.18
GTF3C5-208ENST00000461871 SHISA4Q96DD7 197 aa16.15■□□□□ 0.18
GTF3C5-208ENST00000461871 C12orf42Q96LP6 360 aa16.15■□□□□ 0.18
GTF3C5-208ENST00000461871 AMNQ9BXJ7 453 aa16.15■□□□□ 0.18
GTF3C5-208ENST00000461871 TAF1DQ9H5J8 278 aaPredicted RBP16.15■□□□□ 0.18
GTF3C5-208ENST00000461871 VAT1LQ9HCJ6 419 aa16.15■□□□□ 0.18
GTF3C5-208ENST00000461871 RIC8AQ9NPQ8 531 aa16.15■□□□□ 0.18
GTF3C5-208ENST00000461871 DDX19AQ9NUU7 478 aaKnown RBP16.15■□□□□ 0.18
GTF3C5-208ENST00000461871 CCDC194A0A1B0GVG4 234 aa16.14■□□□□ 0.17
GTF3C5-208ENST00000461871 LAD1O00515 517 aa16.14■□□□□ 0.17
GTF3C5-208ENST00000461871 CUTAO60888 179 aa16.14■□□□□ 0.17
GTF3C5-208ENST00000461871 GADD45BO75293 160 aaPredicted RBP16.14■□□□□ 0.17
GTF3C5-208ENST00000461871 PTPRAP18433 802 aa16.14■□□□□ 0.17
GTF3C5-208ENST00000461871 CMA1P23946 247 aa16.14■□□□□ 0.17
GTF3C5-208ENST00000461871 ME1P48163 572 aa16.14■□□□□ 0.17
GTF3C5-208ENST00000461871 IREB2P48200 963 aaKnown RBP16.14■□□□□ 0.17
GTF3C5-208ENST00000461871 TOB1P50616 345 aaPredicted RBP16.14■□□□□ 0.17
GTF3C5-208ENST00000461871 NR5A1Q13285 461 aa16.14■□□□□ 0.17
GTF3C5-208ENST00000461871 GSE1Q14687 1217 aa16.14■□□□□ 0.17
GTF3C5-208ENST00000461871 SHROOM1Q2M3G4 852 aaPredicted RBP16.14■□□□□ 0.17
GTF3C5-208ENST00000461871 KRT26Q7Z3Y9 468 aa16.14■□□□□ 0.17
GTF3C5-208ENST00000461871 ZNF280CQ8ND82 737 aa16.14■□□□□ 0.17
GTF3C5-208ENST00000461871 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.14■□□□□ 0.172e-6■□□□□ 9.8
GTF3C5-208ENST00000461871 OXER1Q8TDS5 423 aa16.14■□□□□ 0.17
GTF3C5-208ENST00000461871 CHAMP1Q96JM3 812 aa16.14■□□□□ 0.17
GTF3C5-208ENST00000461871 NAP1L4Q99733 375 aaKnown RBP16.14■□□□□ 0.17
GTF3C5-208ENST00000461871 CLIC4Q9Y696 253 aa16.14■□□□□ 0.17
GTF3C5-208ENST00000461871 WDR90Q96KV7 1748 aa16.14■□□□□ 0.17
GTF3C5-208ENST00000461871 FAM237AA0A1B0GTK4 181 aa16.13■□□□□ 0.17
GTF3C5-208ENST00000461871 USP2O75604 605 aaPredicted RBP16.13■□□□□ 0.17
GTF3C5-208ENST00000461871 VEGFAP15692 232 aaPredicted RBP16.13■□□□□ 0.17
GTF3C5-208ENST00000461871 ECE1P42892 770 aa16.13■□□□□ 0.17
GTF3C5-208ENST00000461871 ADCY7P51828 1080 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms