RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 ZNF333Q96JL9 665 aa12.43□□□□□ -0.42
TRAPPC12-213ENST00000461577 TMEM106CQ9BVX2 250 aa12.43□□□□□ -0.42
TRAPPC12-213ENST00000461577 MROH8Q9H579 483 aa12.43□□□□□ -0.42
TRAPPC12-213ENST00000461577 FRMPD2Q68DX3 1309 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC12-213ENST00000461577 ERICH2A1L162 156 aa12.42□□□□□ -0.42
TRAPPC12-213ENST00000461577 SLC27A2O14975 620 aa12.42□□□□□ -0.42
TRAPPC12-213ENST00000461577 PLA2G6O60733 806 aa12.42□□□□□ -0.42
TRAPPC12-213ENST00000461577 SLC4A3P48751 1232 aa12.42□□□□□ -0.42
TRAPPC12-213ENST00000461577 MAP2K5Q13163 448 aa12.42□□□□□ -0.42
TRAPPC12-213ENST00000461577 SART3Q15020 963 aaKnown RBP12.42□□□□□ -0.42
TRAPPC12-213ENST00000461577 MORN1Q5T089 497 aa12.42□□□□□ -0.42
TRAPPC12-213ENST00000461577 IFIT1BQ5T764 474 aaKnown RBP12.42□□□□□ -0.42
TRAPPC12-213ENST00000461577 RNF20Q5VTR2 975 aa12.42□□□□□ -0.42
TRAPPC12-213ENST00000461577 CREB3L3Q68CJ9 461 aa12.42□□□□□ -0.42
TRAPPC12-213ENST00000461577 CYB5R4Q7L1T6 521 aa12.42□□□□□ -0.42
TRAPPC12-213ENST00000461577 RIOX2Q8IUF8 465 aa12.42□□□□□ -0.42
TRAPPC12-213ENST00000461577 TRMT44Q8IYL2 757 aaKnown RBP12.42□□□□□ -0.42
TRAPPC12-213ENST00000461577 CPXCR1Q8N123 301 aa12.42□□□□□ -0.42
TRAPPC12-213ENST00000461577 ENAHQ8N8S7 591 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC12-213ENST00000461577 PNMA1Q8ND90 353 aa12.42□□□□□ -0.42
TRAPPC12-213ENST00000461577 REPS2Q8NFH8 660 aa12.42□□□□□ -0.42
TRAPPC12-213ENST00000461577 ANKS1AQ92625 1134 aa12.42□□□□□ -0.42
TRAPPC12-213ENST00000461577 SLC38A10Q9HBR0 1119 aa12.42□□□□□ -0.42
TRAPPC12-213ENST00000461577 GPCPD1Q9NPB8 672 aa12.42□□□□□ -0.42
TRAPPC12-213ENST00000461577 ZNFX1Q9P2E3 1918 aaKnown RBP12.41□□□□□ -0.42
TRAPPC12-213ENST00000461577 IFIT3O14879 490 aaKnown RBP12.41□□□□□ -0.42
TRAPPC12-213ENST00000461577 STRNO43815 780 aa12.41□□□□□ -0.42
TRAPPC12-213ENST00000461577 INHAP05111 366 aa12.41□□□□□ -0.42
TRAPPC12-213ENST00000461577 PDHBP11177 359 aa12.41□□□□□ -0.42
TRAPPC12-213ENST00000461577 XRCC5P13010 732 aaKnown RBP12.41□□□□□ -0.42
TRAPPC12-213ENST00000461577 GRB14Q14449 540 aa12.41□□□□□ -0.42
TRAPPC12-213ENST00000461577 NECTIN1Q15223 517 aa12.41□□□□□ -0.42
TRAPPC12-213ENST00000461577 SNRNP48Q6IEG0 339 aaKnown RBP12.41□□□□□ -0.42
TRAPPC12-213ENST00000461577 STOX1Q6ZVD7 989 aa12.41□□□□□ -0.42
TRAPPC12-213ENST00000461577 RASGRP2Q7LDG7 609 aa12.41□□□□□ -0.42
TRAPPC12-213ENST00000461577 DPP9Q86TI2 863 aa12.41□□□□□ -0.42
TRAPPC12-213ENST00000461577 MMP19Q99542 508 aa12.41□□□□□ -0.42
TRAPPC12-213ENST00000461577 APBA2Q99767 749 aa12.41□□□□□ -0.42
TRAPPC12-213ENST00000461577 TEX13BQ9BXU2 312 aa12.41□□□□□ -0.42
TRAPPC12-213ENST00000461577 RAVER2Q9HCJ3 691 aaKnown RBP12.41□□□□□ -0.42
TRAPPC12-213ENST00000461577 ZNF214Q9UL59 606 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC12-213ENST00000461577 TAF6LQ9Y6J9 622 aa12.41□□□□□ -0.42
TRAPPC12-213ENST00000461577 HMGCRP04035 888 aa12.4□□□□□ -0.42
TRAPPC12-213ENST00000461577 FCER1AP12319 257 aa12.4□□□□□ -0.42
TRAPPC12-213ENST00000461577 ZKSCAN1P17029 563 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC12-213ENST00000461577 ADORA2AP29274 412 aa12.4□□□□□ -0.42
TRAPPC12-213ENST00000461577 OAZ1P54368 228 aa12.4□□□□□ -0.42
TRAPPC12-213ENST00000461577 ZNF543Q08ER8 600 aa12.4□□□□□ -0.42
TRAPPC12-213ENST00000461577 WTAPQ15007 396 aa12.4□□□□□ -0.42
TRAPPC12-213ENST00000461577 GPATCH4Q5T3I0 446 aaKnown RBP12.4□□□□□ -0.42
TRAPPC12-213ENST00000461577 SYDE2Q5VT97 1194 aa12.4□□□□□ -0.42
TRAPPC12-213ENST00000461577 TTBK2Q6IQ55 1244 aa12.4□□□□□ -0.42
TRAPPC12-213ENST00000461577 CCDC174Q6PII3 467 aa12.4□□□□□ -0.42
TRAPPC12-213ENST00000461577 CHST3Q7LGC8 479 aa12.4□□□□□ -0.42
TRAPPC12-213ENST00000461577 USP6NLQ92738 828 aa12.4□□□□□ -0.42
TRAPPC12-213ENST00000461577 SLC5A4Q9NY91 659 aa12.4□□□□□ -0.42
TRAPPC12-213ENST00000461577 PRR12Q9ULL5 1215 aa12.4□□□□□ -0.42
TRAPPC12-213ENST00000461577 ZNF236Q9UL36 1845 aa12.39□□□□□ -0.43
TRAPPC12-213ENST00000461577 ATP2A1O14983 1001 aa12.39□□□□□ -0.43
TRAPPC12-213ENST00000461577 REC8O95072 547 aa12.39□□□□□ -0.43
TRAPPC12-213ENST00000461577 SNHG28P0DPA3 235 aa12.39□□□□□ -0.43
TRAPPC12-213ENST00000461577 CCL5P13501 91 aa12.39□□□□□ -0.43
TRAPPC12-213ENST00000461577 MCM5P33992 734 aa12.39□□□□□ -0.43
TRAPPC12-213ENST00000461577 SLC16A2P36021 539 aa12.39□□□□□ -0.43
TRAPPC12-213ENST00000461577 SNAP25P60880 206 aa12.39□□□□□ -0.43
TRAPPC12-213ENST00000461577 KCTD2Q14681 263 aa12.39□□□□□ -0.43
TRAPPC12-213ENST00000461577 MTFR1Q15390 333 aa12.39□□□□□ -0.43
TRAPPC12-213ENST00000461577 SEC23AQ15436 765 aa12.39□□□□□ -0.43
TRAPPC12-213ENST00000461577 ASPRV1Q53RT3 343 aa12.39□□□□□ -0.43
TRAPPC12-213ENST00000461577 TMEM67Q5HYA8 995 aa12.39□□□□□ -0.43
TRAPPC12-213ENST00000461577 BTNL9Q6UXG8 535 aa12.39□□□□□ -0.43
TRAPPC12-213ENST00000461577 MB21D2Q8IYB1 491 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC12-213ENST00000461577 ABRAQ8N0Z2 381 aa12.39□□□□□ -0.43
TRAPPC12-213ENST00000461577 RBBP6Q7Z6E9 1792 aaKnown RBP12.38□□□□□ -0.43
TRAPPC12-213ENST00000461577 HOXC6P09630 235 aa12.38□□□□□ -0.43
TRAPPC12-213ENST00000461577 PARP1P09874 1014 aaKnown RBP12.38□□□□□ -0.43
TRAPPC12-213ENST00000461577 GOLGA8HP0CJ92 632 aa12.38□□□□□ -0.43
TRAPPC12-213ENST00000461577 MFSD14CQ5VZR4 134 aa12.38□□□□□ -0.43
TRAPPC12-213ENST00000461577 CHST13Q8NET6 341 aa12.38□□□□□ -0.43
TRAPPC12-213ENST00000461577 NPLOC4Q8TAT6 608 aa12.38□□□□□ -0.43
TRAPPC12-213ENST00000461577 TRIB2Q92519 343 aa12.38□□□□□ -0.43
TRAPPC12-213ENST00000461577 RNF208Q9H0X6 261 aa12.38□□□□□ -0.43
TRAPPC12-213ENST00000461577 UNC93B1Q9H1C4 597 aa12.38□□□□□ -0.43
TRAPPC12-213ENST00000461577 FBXO40Q9UH90 709 aa12.38□□□□□ -0.43
TRAPPC12-213ENST00000461577 RIPK3Q9Y572 518 aa12.38□□□□□ -0.43
TRAPPC12-213ENST00000461577 POTEFA5A3E0 1075 aa12.37□□□□□ -0.43
TRAPPC12-213ENST00000461577 PRC1O43663 620 aa12.37□□□□□ -0.43
TRAPPC12-213ENST00000461577 ALAS1P13196 640 aa12.37□□□□□ -0.43
TRAPPC12-213ENST00000461577 ANTXR2P58335 489 aa12.37□□□□□ -0.43
TRAPPC12-213ENST00000461577 TRIM32Q13049 653 aa12.37□□□□□ -0.43
TRAPPC12-213ENST00000461577 KRT32Q14532 448 aa12.37□□□□□ -0.43
TRAPPC12-213ENST00000461577 CCL14Q16627 93 aa12.37□□□□□ -0.43
TRAPPC12-213ENST00000461577 TKFCQ3LXA3 575 aa12.37□□□□□ -0.43
TRAPPC12-213ENST00000461577 CATIPQ7Z7H3 387 aa12.37□□□□□ -0.43
TRAPPC12-213ENST00000461577 DDX11Q96FC9 970 aa12.37□□□□□ -0.43
TRAPPC12-213ENST00000461577 TMEM87BQ96K49 555 aa12.37□□□□□ -0.43
TRAPPC12-213ENST00000461577 AGBL1Q96MI9 1066 aa12.37□□□□□ -0.43
TRAPPC12-213ENST00000461577 MTA3Q9BTC8 594 aa12.37□□□□□ -0.43
TRAPPC12-213ENST00000461577 RANBP17Q9H2T7 1088 aaKnown RBP12.37□□□□□ -0.43
TRAPPC12-213ENST00000461577 HMX1Q9NP08 348 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms