RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 ZSCAN10Q96SZ4 725 aaPredicted RBP11.93□□□□□ -0.5
SYN3-206ENST00000461446 ZKSCAN3Q9BRR0 538 aa11.93□□□□□ -0.5
SYN3-206ENST00000461446 MOV10L1Q9BXT6 1211 aaKnown RBP11.93□□□□□ -0.5
SYN3-206ENST00000461446 GOPCQ9HD26 462 aa11.93□□□□□ -0.5
SYN3-206ENST00000461446 SYNPO2Q9UMS6 1093 aa11.93□□□□□ -0.5
SYN3-206ENST00000461446 STX8Q9UNK0 236 aa11.93□□□□□ -0.5
SYN3-206ENST00000461446 NDUFB10O96000 172 aa11.92□□□□□ -0.5
SYN3-206ENST00000461446 XRCC5P13010 732 aaKnown RBP11.92□□□□□ -0.5
SYN3-206ENST00000461446 PTPREP23469 700 aa11.92□□□□□ -0.5
SYN3-206ENST00000461446 MCM5P33992 734 aa11.92□□□□□ -0.5
SYN3-206ENST00000461446 RGS2P41220 211 aa11.92□□□□□ -0.5
SYN3-206ENST00000461446 ANTXR2P58335 489 aa11.92□□□□□ -0.5
SYN3-206ENST00000461446 MAP2K5Q13163 448 aa11.92□□□□□ -0.5
SYN3-206ENST00000461446 COL9A3Q14050 684 aaPredicted RBP11.92□□□□□ -0.5
SYN3-206ENST00000461446 CHST3Q7LGC8 479 aa11.92□□□□□ -0.5
SYN3-206ENST00000461446 ANKS1AQ92625 1134 aa11.92□□□□□ -0.5
SYN3-206ENST00000461446 CHMP4CQ96CF2 233 aa11.92□□□□□ -0.5
SYN3-206ENST00000461446 UBAC1Q9BSL1 405 aa11.92□□□□□ -0.5
SYN3-206ENST00000461446 SPATC1LQ9H0A9 340 aa11.92□□□□□ -0.5
SYN3-206ENST00000461446 PAK6Q9NQU5 681 aaPredicted RBP11.92□□□□□ -0.5
SYN3-206ENST00000461446 TNKSO95271 1327 aa11.91□□□□□ -0.5
SYN3-206ENST00000461446 SLC15A5A6NIM6 579 aa11.91□□□□□ -0.5
SYN3-206ENST00000461446 SGPL1O95470 568 aa11.91□□□□□ -0.5
SYN3-206ENST00000461446 HMGB1P09429 215 aaKnown RBP11.91□□□□□ -0.5
SYN3-206ENST00000461446 TOP1P11387 765 aaKnown RBP11.91□□□□□ -0.5
SYN3-206ENST00000461446 ERCC3P19447 782 aa11.91□□□□□ -0.5
SYN3-206ENST00000461446 TMEM132BQ14DG7 1078 aa11.91□□□□□ -0.5
SYN3-206ENST00000461446 SEC23AQ15436 765 aa11.91□□□□□ -0.5
SYN3-206ENST00000461446 NCAPG2Q86XI2 1143 aa11.91□□□□□ -0.5
SYN3-206ENST00000461446 ENAHQ8N8S7 591 aaPredicted RBP11.91□□□□□ -0.5
SYN3-206ENST00000461446 NPLOC4Q8TAT6 608 aa11.91□□□□□ -0.5
SYN3-206ENST00000461446 IGDCC4Q8TDY8 1250 aa11.91□□□□□ -0.5
SYN3-206ENST00000461446 APBA2Q99767 749 aa11.91□□□□□ -0.5
SYN3-206ENST00000461446 TMEM47Q9BQJ4 181 aa11.91□□□□□ -0.5
SYN3-206ENST00000461446 MTA3Q9BTC8 594 aa11.91□□□□□ -0.5
SYN3-206ENST00000461446 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.91□□□□□ -0.5
SYN3-206ENST00000461446 FLRT1Q9NZU1 646 aa11.91□□□□□ -0.5
SYN3-206ENST00000461446 ADAMTS5Q9UNA0 930 aa11.91□□□□□ -0.5
SYN3-206ENST00000461446 RBM19Q9Y4C8 960 aaKnown RBP11.91□□□□□ -0.5
SYN3-206ENST00000461446 VWA5AO00534 786 aa11.9□□□□□ -0.5
SYN3-206ENST00000461446 IFIT3O14879 490 aaKnown RBP11.9□□□□□ -0.5
SYN3-206ENST00000461446 PRC1O43663 620 aa11.9□□□□□ -0.5
SYN3-206ENST00000461446 TFRCP02786 760 aaKnown RBP11.9□□□□□ -0.5
SYN3-206ENST00000461446 PRKAR2AP13861 404 aaKnown RBP11.9□□□□□ -0.5
SYN3-206ENST00000461446 PSMA5P28066 241 aa11.9□□□□□ -0.5
SYN3-206ENST00000461446 ANAPC15P60006 121 aa11.9□□□□□ -0.5
SYN3-206ENST00000461446 EXOSC10Q01780 885 aaKnown RBP11.9□□□□□ -0.5
SYN3-206ENST00000461446 CACNB2Q08289 660 aaPredicted RBP11.9□□□□□ -0.5
SYN3-206ENST00000461446 GRB14Q14449 540 aa11.9□□□□□ -0.5
SYN3-206ENST00000461446 SART3Q15020 963 aaKnown RBP11.9□□□□□ -0.5
SYN3-206ENST00000461446 MAP3K21Q5TCX8 1036 aa11.9□□□□□ -0.5
SYN3-206ENST00000461446 DHX32Q7L7V1 743 aaKnown RBP11.9□□□□□ -0.5
SYN3-206ENST00000461446 MB21D1Q8N884 522 aa11.9□□□□□ -0.5
SYN3-206ENST00000461446 GMCL1P1Q8NEA9 526 aa11.9□□□□□ -0.5
SYN3-206ENST00000461446 TMEM87BQ96K49 555 aa11.9□□□□□ -0.5
SYN3-206ENST00000461446 JAKMIP1Q96N16 626 aaKnown RBP11.9□□□□□ -0.5
SYN3-206ENST00000461446 BACH2Q9BYV9 841 aa11.9□□□□□ -0.5
SYN3-206ENST00000461446 HMX1Q9NP08 348 aaPredicted RBP11.9□□□□□ -0.5
SYN3-206ENST00000461446 PPP1R9AQ9ULJ8 1098 aa11.9□□□□□ -0.5
SYN3-206ENST00000461446 IVNS1ABPQ9Y6Y0 642 aa11.9□□□□□ -0.5
SYN3-206ENST00000461446 PARP14Q460N5 1801 aa11.9□□□□□ -0.5
SYN3-206ENST00000461446 MYH4Q9Y623 1939 aa11.9□□□□□ -0.51
SYN3-206ENST00000461446 RPTORQ8N122 1335 aa11.89□□□□□ -0.51
SYN3-206ENST00000461446 WDR19Q8NEZ3 1342 aa11.89□□□□□ -0.51
SYN3-206ENST00000461446 A0A0G2JMZ2 1700 aa11.89□□□□□ -0.51
SYN3-206ENST00000461446 ERICH2A1L162 156 aa11.89□□□□□ -0.51
SYN3-206ENST00000461446 COBLO75128 1261 aa11.89□□□□□ -0.51
SYN3-206ENST00000461446 ADORA2AP29274 412 aa11.89□□□□□ -0.51
SYN3-206ENST00000461446 CCND3P30281 292 aaPredicted RBP11.89□□□□□ -0.51
SYN3-206ENST00000461446 TMEM67Q5HYA8 995 aa11.89□□□□□ -0.51
SYN3-206ENST00000461446 IFIT1BQ5T764 474 aaKnown RBP11.89□□□□□ -0.51
SYN3-206ENST00000461446 PRPF38BQ5VTL8 546 aaKnown RBP11.89□□□□□ -0.51
SYN3-206ENST00000461446 SLFN13Q68D06 897 aa11.89□□□□□ -0.51
SYN3-206ENST00000461446 BLOC1S2Q6QNY1 142 aa11.89□□□□□ -0.51
SYN3-206ENST00000461446 UBE2Q1Q7Z7E8 422 aa11.89□□□□□ -0.51
SYN3-206ENST00000461446 REPS2Q8NFH8 660 aa11.89□□□□□ -0.51
SYN3-206ENST00000461446 IL17RAQ96F46 866 aa11.89□□□□□ -0.51
SYN3-206ENST00000461446 SLF1Q9BQI6 1058 aa11.89□□□□□ -0.51
SYN3-206ENST00000461446 TM6SF1Q9BZW5 370 aa11.89□□□□□ -0.51
SYN3-206ENST00000461446 CRISPLD2Q9H0B8 497 aa11.89□□□□□ -0.51
SYN3-206ENST00000461446 ZSWIM6Q9HCJ5 1215 aa11.89□□□□□ -0.51
SYN3-206ENST00000461446 COL11A1P12107 1806 aaPredicted RBP11.88□□□□□ -0.51
SYN3-206ENST00000461446 FARP2O94887 1054 aaPredicted RBP11.88□□□□□ -0.51
SYN3-206ENST00000461446 CPA1P15085 419 aa11.88□□□□□ -0.51
SYN3-206ENST00000461446 CYP2C19P33261 490 aa11.88□□□□□ -0.51
SYN3-206ENST00000461446 STAT3P40763 770 aa11.88□□□□□ -0.51
SYN3-206ENST00000461446 LIFRP42702 1097 aa11.88□□□□□ -0.51
SYN3-206ENST00000461446 WTAPQ15007 396 aa11.88□□□□□ -0.51
SYN3-206ENST00000461446 RASGRP2Q7LDG7 609 aa11.88□□□□□ -0.51
SYN3-206ENST00000461446 DPP9Q86TI2 863 aa11.88□□□□□ -0.51
SYN3-206ENST00000461446 TRMT44Q8IYL2 757 aaKnown RBP11.88□□□□□ -0.51
SYN3-206ENST00000461446 TMTC2Q8N394 836 aa11.88□□□□□ -0.51
SYN3-206ENST00000461446 SHCBP1Q8NEM2 672 aa11.88□□□□□ -0.51
SYN3-206ENST00000461446 DIS3LQ8TF46 1054 aaKnown RBP11.88□□□□□ -0.51
SYN3-206ENST00000461446 KIFC2Q96AC6 838 aa11.88□□□□□ -0.51
SYN3-206ENST00000461446 GMCL1Q96IK5 515 aa11.88□□□□□ -0.51
SYN3-206ENST00000461446 MROH8Q9H579 483 aa11.88□□□□□ -0.51
SYN3-206ENST00000461446 KAT14Q9H8E8 782 aa11.88□□□□□ -0.51
SYN3-206ENST00000461446 SENP2Q9HC62 589 aa11.88□□□□□ -0.51
SYN3-206ENST00000461446 GPHNQ9NQX3 736 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms