RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 MKL1Q969V6 931 aa18.42■□□□□ 0.54
NUP50-213ENST00000461437 MAML3Q96JK9 1138 aa18.42■□□□□ 0.54
NUP50-213ENST00000461437 RAVER2Q9HCJ3 691 aaKnown RBP18.42■□□□□ 0.54
NUP50-213ENST00000461437 IL17RBQ9NRM6 502 aa18.42■□□□□ 0.54
NUP50-213ENST00000461437 DDX20Q9UHI6 824 aaKnown RBP18.42■□□□□ 0.54
NUP50-213ENST00000461437 NR2E3Q9Y5X4 410 aa18.42■□□□□ 0.54
NUP50-213ENST00000461437 LAMA4Q16363 1823 aa18.42■□□□□ 0.54
NUP50-213ENST00000461437 TSPY2A6NKD2 308 aa18.41■□□□□ 0.54
NUP50-213ENST00000461437 RANBP6O60518 1105 aaKnown RBP18.41■□□□□ 0.54
NUP50-213ENST00000461437 SLC25A27O95847 323 aa18.41■□□□□ 0.54
NUP50-213ENST00000461437 FGAP02671 866 aa18.41■□□□□ 0.54
NUP50-213ENST00000461437 SNAP25P60880 206 aa18.41■□□□□ 0.54
NUP50-213ENST00000461437 RRP12Q5JTH9 1297 aaKnown RBP18.41■□□□□ 0.54
NUP50-213ENST00000461437 OLFML2BQ68BL8 750 aa18.41■□□□□ 0.54
NUP50-213ENST00000461437 TOMM22Q9NS69 142 aa18.41■□□□□ 0.54
NUP50-213ENST00000461437 STX8Q9UNK0 236 aa18.41■□□□□ 0.54
NUP50-213ENST00000461437 MYCNP04198 464 aaPredicted RBP18.4■□□□□ 0.54
NUP50-213ENST00000461437 HSPD1P10809 573 aaKnown RBP18.4■□□□□ 0.54
NUP50-213ENST00000461437 TAL1P17542 331 aaPredicted RBP18.4■□□□□ 0.54
NUP50-213ENST00000461437 SDSP20132 328 aa18.4■□□□□ 0.54
NUP50-213ENST00000461437 AAMPQ13685 434 aa18.4■□□□□ 0.54
NUP50-213ENST00000461437 CCDC171Q6TFL3 1326 aa18.4■□□□□ 0.54
NUP50-213ENST00000461437 RANBP2P49792 3224 aaKnown RBP18.4■□□□□ 0.54
NUP50-213ENST00000461437 TMEM232C9JQI7 657 aa18.39■□□□□ 0.53
NUP50-213ENST00000461437 COL6A1P12109 1028 aa18.39■□□□□ 0.53
NUP50-213ENST00000461437 BMP3P12645 472 aa18.39■□□□□ 0.53
NUP50-213ENST00000461437 MCCP23508 829 aa18.39■□□□□ 0.53
NUP50-213ENST00000461437 KCTD2Q14681 263 aa18.39■□□□□ 0.53
NUP50-213ENST00000461437 LRRC26Q2I0M4 334 aa18.39■□□□□ 0.53
NUP50-213ENST00000461437 GJC2Q5T442 439 aaPredicted RBP18.39■□□□□ 0.53
NUP50-213ENST00000461437 KCTD1Q719H9 257 aa18.39■□□□□ 0.53
NUP50-213ENST00000461437 ABRAQ8N0Z2 381 aa18.39■□□□□ 0.53
NUP50-213ENST00000461437 PRPF38AQ8NAV1 312 aaKnown RBP18.39■□□□□ 0.53
NUP50-213ENST00000461437 GMCL1P1Q8NEA9 526 aa18.39■□□□□ 0.53
NUP50-213ENST00000461437 PDE4AP27815 886 aa18.38■□□□□ 0.53
NUP50-213ENST00000461437 ALX1Q15699 326 aa18.38■□□□□ 0.53
NUP50-213ENST00000461437 ZNF792Q3KQV3 632 aa18.38■□□□□ 0.53
NUP50-213ENST00000461437 LENG1Q96BZ8 264 aaPredicted RBP18.38■□□□□ 0.53
NUP50-213ENST00000461437 TEX13BQ9BXU2 312 aa18.38■□□□□ 0.53
NUP50-213ENST00000461437 SENP6Q9GZR1 1112 aaPredicted RBP18.38■□□□□ 0.53
NUP50-213ENST00000461437 ANAPC4Q9UJX5 808 aa18.38■□□□□ 0.53
NUP50-213ENST00000461437 FEM1BQ9UK73 627 aa18.38■□□□□ 0.53
NUP50-213ENST00000461437 LCTP09848 1927 aa18.38■□□□□ 0.53
NUP50-213ENST00000461437 ZBED4O75132 1171 aa18.37■□□□□ 0.53
NUP50-213ENST00000461437 CAPN2P17655 700 aa18.37■□□□□ 0.53
NUP50-213ENST00000461437 ATN1P54259 1190 aaPredicted RBP18.37■□□□□ 0.53
NUP50-213ENST00000461437 IKQ13123 557 aaPredicted RBP18.37■□□□□ 0.53
NUP50-213ENST00000461437 CWC27Q6UX04 472 aaKnown RBP18.37■□□□□ 0.53
NUP50-213ENST00000461437 TBC1D10CQ8IV04 446 aa18.37■□□□□ 0.53
NUP50-213ENST00000461437 PRO3102Q9H379 93 aa18.37■□□□□ 0.53
NUP50-213ENST00000461437 OSBPL3Q9H4L5 887 aa18.37■□□□□ 0.53
NUP50-213ENST00000461437 SLC38A10Q9HBR0 1119 aa18.37■□□□□ 0.53
NUP50-213ENST00000461437 HOMER2Q9NSB8 354 aa18.37■□□□□ 0.53
NUP50-213ENST00000461437 SLC5A4Q9NY91 659 aa18.37■□□□□ 0.53
NUP50-213ENST00000461437 CTDP1Q9Y5B0 961 aaPredicted RBP18.37■□□□□ 0.53
NUP50-213ENST00000461437 DNAH12Q6ZR08 3092 aa18.36■□□□□ 0.53
NUP50-213ENST00000461437 ORC4O43929 436 aa18.36■□□□□ 0.53
NUP50-213ENST00000461437 SLC1A4P43007 532 aa18.36■□□□□ 0.53
NUP50-213ENST00000461437 SEPT4O43236 478 aa18.35■□□□□ 0.53
NUP50-213ENST00000461437 TTBK2Q6IQ55 1244 aa18.35■□□□□ 0.53
NUP50-213ENST00000461437 CCDC174Q6PII3 467 aa18.35■□□□□ 0.53
NUP50-213ENST00000461437 DDX11Q96FC9 970 aa18.35■□□□□ 0.53
NUP50-213ENST00000461437 AGBL1Q96MI9 1066 aa18.35■□□□□ 0.53
NUP50-213ENST00000461437 TINF2Q9BSI4 451 aa18.35■□□□□ 0.53
NUP50-213ENST00000461437 IL25Q9H293 177 aa18.35■□□□□ 0.53
NUP50-213ENST00000461437 SZT2Q5T011 3432 aa18.35■□□□□ 0.53
NUP50-213ENST00000461437 NEDD4P46934 1319 aa18.34■□□□□ 0.53
NUP50-213ENST00000461437 FRMPD2Q68DX3 1309 aaPredicted RBP18.34■□□□□ 0.53
NUP50-213ENST00000461437 FGRP09769 529 aa18.34■□□□□ 0.53
NUP50-213ENST00000461437 STAT2P52630 851 aa18.34■□□□□ 0.53
NUP50-213ENST00000461437 CCDC96Q2M329 555 aa18.34■□□□□ 0.53
NUP50-213ENST00000461437 GMCL1Q96IK5 515 aa18.34■□□□□ 0.53
NUP50-213ENST00000461437 FGD4Q96M96 766 aa18.34■□□□□ 0.53
NUP50-213ENST00000461437 ZKSCAN3Q9BRR0 538 aa18.34■□□□□ 0.53
NUP50-213ENST00000461437 DIAPH3Q9NSV4 1193 aa18.34■□□□□ 0.53
NUP50-213ENST00000461437 DDX49Q9Y6V7 483 aaKnown RBP18.34■□□□□ 0.53
NUP50-213ENST00000461437 ZNF536O15090 1300 aa18.33■□□□□ 0.53
NUP50-213ENST00000461437 MSCO60682 206 aa18.33■□□□□ 0.52
NUP50-213ENST00000461437 GSPT1P15170 499 aaKnown RBP18.33■□□□□ 0.52
NUP50-213ENST00000461437 COPB2P35606 906 aa18.33■□□□□ 0.52
NUP50-213ENST00000461437 SLC16A2P36021 539 aa18.33■□□□□ 0.52
NUP50-213ENST00000461437 STAG1Q8WVM7 1258 aa18.33■□□□□ 0.52
NUP50-213ENST00000461437 FERMT2Q96AC1 680 aa18.33■□□□□ 0.52
NUP50-213ENST00000461437 TMEM47Q9BQJ4 181 aa18.33■□□□□ 0.52
NUP50-213ENST00000461437 SYNPO2Q9UMS6 1093 aa18.33■□□□□ 0.52
NUP50-213ENST00000461437 ZMYM6O95789 1325 aa18.32■□□□□ 0.52
NUP50-213ENST00000461437 DNAJC25-GNG10A0A024R161 153 aa18.32■□□□□ 0.52
NUP50-213ENST00000461437 DNM1LO00429 736 aa18.32■□□□□ 0.52
NUP50-213ENST00000461437 ATP2A1O14983 1001 aa18.32■□□□□ 0.52
NUP50-213ENST00000461437 ZNF865P0CJ78 1059 aaPredicted RBP18.32■□□□□ 0.52
NUP50-213ENST00000461437 IRX5P78411 483 aaPredicted RBP18.32■□□□□ 0.52
NUP50-213ENST00000461437 CNTN2Q02246 1040 aa18.32■□□□□ 0.52
NUP50-213ENST00000461437 RCSD1Q6JBY9 416 aa18.32■□□□□ 0.52
NUP50-213ENST00000461437 ANKRD35Q8N283 1001 aa18.32■□□□□ 0.52
NUP50-213ENST00000461437 GPCPD1Q9NPB8 672 aa18.32■□□□□ 0.52
NUP50-213ENST00000461437 PRR12Q9ULL5 1215 aa18.32■□□□□ 0.52
NUP50-213ENST00000461437 LTBP2Q14767 1821 aa18.32■□□□□ 0.52
NUP50-213ENST00000461437 LRRC37A2A6NM11 1700 aa18.32■□□□□ 0.52
NUP50-213ENST00000461437 MYH6P13533 1939 aa18.31■□□□□ 0.52
NUP50-213ENST00000461437 SNAI1O95863 264 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms