RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 CEP95Q96GE4 821 aa12.74□□□□□ -0.37
COPS7B-217ENST00000461350 ZNF287Q9HBT7 754 aa12.74□□□□□ -0.37
COPS7B-217ENST00000461350 FAM198AQ9UFP1 575 aa12.74□□□□□ -0.37
COPS7B-217ENST00000461350 BCS1LQ9Y276 419 aa12.74□□□□□ -0.37
COPS7B-217ENST00000461350 PHLPP2Q6ZVD8 1323 aa12.74□□□□□ -0.37
COPS7B-217ENST00000461350 CBFA2T2O43439 604 aa12.73□□□□□ -0.37
COPS7B-217ENST00000461350 DEXIO95424 95 aa12.73□□□□□ -0.37
COPS7B-217ENST00000461350 TOP1P11387 765 aaKnown RBP12.73□□□□□ -0.37
COPS7B-217ENST00000461350 VEGFAP15692 232 aaPredicted RBP12.73□□□□□ -0.37
COPS7B-217ENST00000461350 FKBP1AP62942 108 aaKnown RBP12.73□□□□□ -0.37
COPS7B-217ENST00000461350 AKAP17AQ02040 695 aaKnown RBP12.73□□□□□ -0.37
COPS7B-217ENST00000461350 DGKHQ86XP1 1220 aa12.73□□□□□ -0.37
COPS7B-217ENST00000461350 DPF2Q92785 391 aa12.73□□□□□ -0.37
COPS7B-217ENST00000461350 VPS54Q9P1Q0 977 aa12.73□□□□□ -0.37
COPS7B-217ENST00000461350 SERPINB13Q9UIV8 391 aa12.73□□□□□ -0.37
COPS7B-217ENST00000461350 DDTLA6NHG4 134 aaPredicted RBP12.73□□□□□ -0.37
COPS7B-217ENST00000461350 GOLGA8HP0CJ92 632 aa12.73□□□□□ -0.37
COPS7B-217ENST00000461350 CALM1P0DP23 149 aa12.73□□□□□ -0.37
COPS7B-217ENST00000461350 CALM2P0DP24 149 aa12.73□□□□□ -0.37
COPS7B-217ENST00000461350 CALM3P0DP25 149 aa12.73□□□□□ -0.37
COPS7B-217ENST00000461350 AKR1B1P15121 316 aa12.73□□□□□ -0.37
COPS7B-217ENST00000461350 CMA1P23946 247 aa12.73□□□□□ -0.37
COPS7B-217ENST00000461350 GABPAQ06546 454 aa12.73□□□□□ -0.37
COPS7B-217ENST00000461350 PKN1Q16512 942 aa12.73□□□□□ -0.37
COPS7B-217ENST00000461350 TEX35Q5T0J7 233 aa12.73□□□□□ -0.37
COPS7B-217ENST00000461350 CPVLQ9H3G5 476 aa12.73□□□□□ -0.37
COPS7B-217ENST00000461350 TMX1Q9H3N1 280 aa12.73□□□□□ -0.37
COPS7B-217ENST00000461350 BTBD18B2RXH4 712 aa12.73□□□□□ -0.37
COPS7B-217ENST00000461350 IKBKBO14920 756 aa12.73□□□□□ -0.37
COPS7B-217ENST00000461350 SEC31AO94979 1220 aaKnown RBP12.73□□□□□ -0.37
COPS7B-217ENST00000461350 PLA2G4AP47712 749 aa12.73□□□□□ -0.37
COPS7B-217ENST00000461350 MYL5Q02045 173 aa12.73□□□□□ -0.37
COPS7B-217ENST00000461350 SHROOM1Q2M3G4 852 aaPredicted RBP12.73□□□□□ -0.37
COPS7B-217ENST00000461350 HSP90AA4PQ58FG1 418 aa12.73□□□□□ -0.37
COPS7B-217ENST00000461350 RSBN1LQ6PCB5 846 aaPredicted RBP12.73□□□□□ -0.37
COPS7B-217ENST00000461350 CREBRFQ8IUR6 639 aa12.73□□□□□ -0.37
COPS7B-217ENST00000461350 TRERF1Q96PN7 1200 aa12.73□□□□□ -0.37
COPS7B-217ENST00000461350 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.73□□□□□ -0.37
COPS7B-217ENST00000461350 RBM28Q9NW13 759 aaKnown RBP12.73□□□□□ -0.37
COPS7B-217ENST00000461350 SERPINA10Q9UK55 444 aa12.73□□□□□ -0.37
COPS7B-217ENST00000461350 CLRN2A0PK11 232 aa12.72□□□□□ -0.37
COPS7B-217ENST00000461350 AXDND1Q5T1B0 1012 aaPredicted RBP12.72□□□□□ -0.37
COPS7B-217ENST00000461350 NEDD1Q8NHV4 660 aa12.72□□□□□ -0.37
COPS7B-217ENST00000461350 SRRTQ9BXP5 876 aaKnown RBP12.72□□□□□ -0.37
COPS7B-217ENST00000461350 RNF26Q9BY78 433 aaPredicted RBP12.72□□□□□ -0.37
COPS7B-217ENST00000461350 MYH8P13535 1937 aa12.72□□□□□ -0.37
COPS7B-217ENST00000461350 CYP2C19P33261 490 aa12.72□□□□□ -0.37
COPS7B-217ENST00000461350 FAM193AP78312 1265 aa12.72□□□□□ -0.37
COPS7B-217ENST00000461350 NR5A1Q13285 461 aa12.72□□□□□ -0.37
COPS7B-217ENST00000461350 SH3BP5LQ7L8J4 393 aa12.72□□□□□ -0.37
COPS7B-217ENST00000461350 NIM1KQ8IY84 436 aa12.72□□□□□ -0.37
COPS7B-217ENST00000461350 PDILTQ8N807 584 aa12.72□□□□□ -0.37
COPS7B-217ENST00000461350 OXER1Q8TDS5 423 aa12.72□□□□□ -0.37
COPS7B-217ENST00000461350 WASF1Q92558 559 aa12.72□□□□□ -0.37
COPS7B-217ENST00000461350 SGIP1Q9BQI5 828 aa12.72□□□□□ -0.37
COPS7B-217ENST00000461350 CNTNAP5Q8WYK1 1306 aa12.72□□□□□ -0.37
COPS7B-217ENST00000461350 ZSCAN12O43309 604 aa12.72□□□□□ -0.37
COPS7B-217ENST00000461350 SHMT1P34896 483 aa12.72□□□□□ -0.37
COPS7B-217ENST00000461350 HDLBPQ00341 1268 aaKnown RBP12.72□□□□□ -0.37
COPS7B-217ENST00000461350 PNOCQ13519 176 aa12.72□□□□□ -0.37
COPS7B-217ENST00000461350 TRIM65Q6PJ69 517 aa12.72□□□□□ -0.37
COPS7B-217ENST00000461350 DIS3L2Q8IYB7 885 aaKnown RBP12.72□□□□□ -0.37
COPS7B-217ENST00000461350 EPC1Q9H2F5 836 aa12.72□□□□□ -0.37
COPS7B-217ENST00000461350 TCP11L1Q9NUJ3 509 aa12.72□□□□□ -0.37
COPS7B-217ENST00000461350 TMEM232C9JQI7 657 aa12.71□□□□□ -0.37
COPS7B-217ENST00000461350 MPHOSPH10O00566 681 aaKnown RBP12.71□□□□□ -0.37
COPS7B-217ENST00000461350 TADA3O75528 432 aa12.71□□□□□ -0.37
COPS7B-217ENST00000461350 MMP1P03956 469 aa12.71□□□□□ -0.37
COPS7B-217ENST00000461350 PPP2R5BQ15173 497 aa12.71□□□□□ -0.37
COPS7B-217ENST00000461350 GRIPAP1Q4V328 841 aa12.71□□□□□ -0.37
COPS7B-217ENST00000461350 NLGN2Q8NFZ4 835 aa12.71□□□□□ -0.37
COPS7B-217ENST00000461350 TAOK3Q9H2K8 898 aa12.71□□□□□ -0.37
COPS7B-217ENST00000461350 DNAJC18Q9H819 358 aa12.71□□□□□ -0.37
COPS7B-217ENST00000461350 NFKBIEO00221 500 aa12.71□□□□□ -0.38
COPS7B-217ENST00000461350 HLA-DOAP06340 250 aa12.71□□□□□ -0.38
COPS7B-217ENST00000461350 VIL1P09327 827 aaKnown RBP12.71□□□□□ -0.38
COPS7B-217ENST00000461350 PTGER2P43116 358 aa12.71□□□□□ -0.38
COPS7B-217ENST00000461350 IRX5P78411 483 aaPredicted RBP12.71□□□□□ -0.38
COPS7B-217ENST00000461350 ANKS1AQ92625 1134 aa12.71□□□□□ -0.38
COPS7B-217ENST00000461350 MRIQ9BWK5 157 aa12.71□□□□□ -0.38
COPS7B-217ENST00000461350 ZNRF3Q9ULT6 936 aa12.71□□□□□ -0.38
COPS7B-217ENST00000461350 SHTN1A0MZ66 631 aa12.7□□□□□ -0.38
COPS7B-217ENST00000461350 EFCAB8A8MWE9 144 aa12.7□□□□□ -0.38
COPS7B-217ENST00000461350 PRPF3O43395 683 aaKnown RBP12.7□□□□□ -0.38
COPS7B-217ENST00000461350 GNG11P61952 73 aa12.7□□□□□ -0.38
COPS7B-217ENST00000461350 CXCL9Q07325 125 aa12.7□□□□□ -0.38
COPS7B-217ENST00000461350 SLC39A14Q15043 492 aa12.7□□□□□ -0.38
COPS7B-217ENST00000461350 SLC35G1Q2M3R5 365 aa12.7□□□□□ -0.38
COPS7B-217ENST00000461350 USP17L2Q6R6M4 530 aa12.7□□□□□ -0.38
COPS7B-217ENST00000461350 LRRC47Q8N1G4 583 aaKnown RBP12.7□□□□□ -0.38
COPS7B-217ENST00000461350 JMYQ8N9B5 988 aa12.7□□□□□ -0.38
COPS7B-217ENST00000461350 HSD3B7Q9H2F3 369 aa12.7□□□□□ -0.38
COPS7B-217ENST00000461350 FANCLQ9NW38 375 aa12.7□□□□□ -0.38
COPS7B-217ENST00000461350 TMEM51Q9NW97 253 aa12.7□□□□□ -0.38
COPS7B-217ENST00000461350 MAD2L2Q9UI95 211 aa12.7□□□□□ -0.38
COPS7B-217ENST00000461350 SCAF8Q9UPN6 1271 aaKnown RBP12.7□□□□□ -0.38
COPS7B-217ENST00000461350 TCP10L2B9ZVM9 353 aa12.7□□□□□ -0.38
COPS7B-217ENST00000461350 ZRANB2O95218 330 aaKnown RBP eCLIP12.7□□□□□ -0.38
COPS7B-217ENST00000461350 ATP2B2Q01814 1243 aa12.7□□□□□ -0.38
COPS7B-217ENST00000461350 VSTM4Q8IW00 320 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms