RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 PCDHB5Q9Y5E4 795 aa5.79□□□□□ -1.48
CLK1-206ENST00000461326 PTPN11Q06124 597 aaPredicted RBP5.78□□□□□ -1.48
CLK1-206ENST00000461326 DUSP4Q13115 394 aa5.78□□□□□ -1.48
CLK1-206ENST00000461326 SEZ6Q53EL9 994 aa5.78□□□□□ -1.48
CLK1-206ENST00000461326 GGNQ86UU5 652 aa5.78□□□□□ -1.48
CLK1-206ENST00000461326 CPLX3Q8WVH0 158 aa5.78□□□□□ -1.48
CLK1-206ENST00000461326 JARID2Q92833 1246 aaPredicted RBP5.78□□□□□ -1.48
CLK1-206ENST00000461326 SIGLEC10Q96LC7 697 aa5.78□□□□□ -1.48
CLK1-206ENST00000461326 Q96M66 194 aa5.78□□□□□ -1.48
CLK1-206ENST00000461326 DNAJC2Q99543 621 aaKnown RBP5.78□□□□□ -1.48
CLK1-206ENST00000461326 SRRTQ9BXP5 876 aaKnown RBP5.78□□□□□ -1.48
CLK1-206ENST00000461326 GPR62Q9BZJ7 368 aa5.78□□□□□ -1.48
CLK1-206ENST00000461326 KCNH3Q9ULD8 1083 aa5.78□□□□□ -1.48
CLK1-206ENST00000461326 IRAK3Q9Y616 596 aa5.78□□□□□ -1.48
CLK1-206ENST00000461326 OR14I1A6ND48 311 aa5.77□□□□□ -1.49
CLK1-206ENST00000461326 PI3P19957 117 aa5.77□□□□□ -1.49
CLK1-206ENST00000461326 CANXP27824 592 aaKnown RBP5.77□□□□□ -1.49
CLK1-206ENST00000461326 MLECQ14165 292 aa5.77□□□□□ -1.49
CLK1-206ENST00000461326 SSPNQ14714 243 aa5.77□□□□□ -1.49
CLK1-206ENST00000461326 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.77□□□□□ -1.49
CLK1-206ENST00000461326 NOP9Q86U38 636 aaKnown RBP5.77□□□□□ -1.49
CLK1-206ENST00000461326 TSPYL5Q86VY4 417 aaPredicted RBP5.77□□□□□ -1.49
CLK1-206ENST00000461326 MRPL41Q8IXM3 137 aaKnown RBP5.77□□□□□ -1.49
CLK1-206ENST00000461326 ANKS4BQ8N8V4 417 aa5.77□□□□□ -1.49
CLK1-206ENST00000461326 PPP1R13LQ8WUF5 828 aa5.77□□□□□ -1.49
CLK1-206ENST00000461326 FERD3LQ96RJ6 166 aa5.77□□□□□ -1.49
CLK1-206ENST00000461326 ZNRF3Q9ULT6 936 aa5.77□□□□□ -1.49
CLK1-206ENST00000461326 OTOL1A6NHN0 477 aaPredicted RBP5.76□□□□□ -1.49
CLK1-206ENST00000461326 ATE1O95260 518 aa5.76□□□□□ -1.49
CLK1-206ENST00000461326 MCM4P33991 863 aa5.76□□□□□ -1.49
CLK1-206ENST00000461326 AFF3P51826 1226 aaKnown RBP5.76□□□□□ -1.49
CLK1-206ENST00000461326 KRTAP10-2P60368 255 aa5.76□□□□□ -1.49
CLK1-206ENST00000461326 NFKB2Q00653 900 aa5.76□□□□□ -1.49
CLK1-206ENST00000461326 NFE2L2Q16236 605 aa5.76□□□□□ -1.49
CLK1-206ENST00000461326 LRRFIP1Q32MZ4 808 aaKnown RBP5.76□□□□□ -1.49
CLK1-206ENST00000461326 SLC6A19Q695T7 634 aa5.76□□□□□ -1.49
CLK1-206ENST00000461326 DPH6Q7L8W6 267 aa5.76□□□□□ -1.49
CLK1-206ENST00000461326 SP8Q8IXZ3 490 aa5.76□□□□□ -1.49
CLK1-206ENST00000461326 RBBP8NLQ8NC74 664 aaPredicted RBP5.76□□□□□ -1.49
CLK1-206ENST00000461326 CRBNQ96SW2 442 aa5.76□□□□□ -1.49
CLK1-206ENST00000461326 DPH2Q9BQC3 489 aaPredicted RBP5.76□□□□□ -1.49
CLK1-206ENST00000461326 TMPRSS5Q9H3S3 457 aa5.76□□□□□ -1.49
CLK1-206ENST00000461326 EHMT1Q9H9B1 1298 aa5.76□□□□□ -1.49
CLK1-206ENST00000461326 ZNF408Q9H9D4 720 aa5.76□□□□□ -1.49
CLK1-206ENST00000461326 PCDHA11Q9Y5I1 949 aa5.76□□□□□ -1.49
CLK1-206ENST00000461326 PRR36Q9H6K5 1346 aa5.75□□□□□ -1.49
CLK1-206ENST00000461326 TLR3O15455 904 aaKnown RBP5.75□□□□□ -1.49
CLK1-206ENST00000461326 PGRP06401 933 aa5.75□□□□□ -1.49
CLK1-206ENST00000461326 EIF6P56537 245 aaKnown RBP5.75□□□□□ -1.49
CLK1-206ENST00000461326 PDE4BQ07343 736 aa5.75□□□□□ -1.49
CLK1-206ENST00000461326 FBXO27Q8NI29 283 aa5.75□□□□□ -1.49
CLK1-206ENST00000461326 TMEM87BQ96K49 555 aa5.75□□□□□ -1.49
CLK1-206ENST00000461326 LNPKQ9C0E8 428 aa5.75□□□□□ -1.49
CLK1-206ENST00000461326 OSBPL2Q9H1P3 480 aa5.75□□□□□ -1.49
CLK1-206ENST00000461326 BRMS1Q9HCU9 246 aa5.75□□□□□ -1.49
CLK1-206ENST00000461326 SIRT5Q9NXA8 310 aa5.75□□□□□ -1.49
CLK1-206ENST00000461326 TJP2Q9UDY2 1190 aa5.75□□□□□ -1.49
CLK1-206ENST00000461326 PRKAG3Q9UGI9 489 aa5.75□□□□□ -1.49
CLK1-206ENST00000461326 R3HCC1Q9Y3T6 440 aaKnown RBP5.75□□□□□ -1.49
CLK1-206ENST00000461326 HRKO00198 91 aa5.74□□□□□ -1.49
CLK1-206ENST00000461326 U2SURPO15042 1029 aaKnown RBP5.74□□□□□ -1.49
CLK1-206ENST00000461326 GIPRP48546 466 aa5.74□□□□□ -1.49
CLK1-206ENST00000461326 CDK8P49336 464 aa5.74□□□□□ -1.49
CLK1-206ENST00000461326 SRSF3P84103 164 aaKnown RBP5.74□□□□□ -1.49
CLK1-206ENST00000461326 C19orf47Q8N9M1 422 aaKnown RBP5.74□□□□□ -1.49
CLK1-206ENST00000461326 DTWD2Q8NBA8 298 aa5.74□□□□□ -1.49
CLK1-206ENST00000461326 DNAJB8Q8NHS0 232 aa5.74□□□□□ -1.49
CLK1-206ENST00000461326 MKL1Q969V6 931 aa5.74□□□□□ -1.49
CLK1-206ENST00000461326 SHDQ96IW2 340 aa5.74□□□□□ -1.49
CLK1-206ENST00000461326 TRIM55Q9BYV6 548 aa5.74□□□□□ -1.49
CLK1-206ENST00000461326 SIRPGQ9P1W8 387 aa5.74□□□□□ -1.49
CLK1-206ENST00000461326 MBD1Q9UIS9 605 aaPredicted RBP5.74□□□□□ -1.49
CLK1-206ENST00000461326 CEP131Q9UPN4 1083 aa5.74□□□□□ -1.49
CLK1-206ENST00000461326 LOC105371045A0A1W2PR82 267 aa5.73□□□□□ -1.49
CLK1-206ENST00000461326 SLC22A31A6NKX4 558 aa5.73□□□□□ -1.49
CLK1-206ENST00000461326 MEIS3P2A8K0S8 358 aa5.73□□□□□ -1.49
CLK1-206ENST00000461326 SPATS1Q496A3 300 aa5.73□□□□□ -1.49
CLK1-206ENST00000461326 ADGRF1Q5T601 910 aa5.73□□□□□ -1.49
CLK1-206ENST00000461326 GK5Q6ZS86 529 aa5.73□□□□□ -1.49
CLK1-206ENST00000461326 FEZF2Q8TBJ5 459 aa5.73□□□□□ -1.49
CLK1-206ENST00000461326 PMFBP1Q8TBY8 1022 aa5.73□□□□□ -1.49
CLK1-206ENST00000461326 DACT3Q96B18 629 aaPredicted RBP5.73□□□□□ -1.49
CLK1-206ENST00000461326 ANAPC16Q96DE5 110 aa5.73□□□□□ -1.49
CLK1-206ENST00000461326 ADAM30Q9UKF2 790 aa5.73□□□□□ -1.49
CLK1-206ENST00000461326 PPT2Q9UMR5 302 aa5.73□□□□□ -1.49
CLK1-206ENST00000461326 PCDHB14Q9Y5E9 798 aa5.73□□□□□ -1.49
CLK1-206ENST00000461326 RBAK-RBAKDNI3L0D1 243 aa5.72□□□□□ -1.49
CLK1-206ENST00000461326 GFRA2O00451 464 aa5.72□□□□□ -1.49
CLK1-206ENST00000461326 PSPNO60542 156 aa5.72□□□□□ -1.49
CLK1-206ENST00000461326 RAB33AQ14088 237 aa5.72□□□□□ -1.49
CLK1-206ENST00000461326 ZXDCQ2QGD7 858 aaPredicted RBP5.72□□□□□ -1.49
CLK1-206ENST00000461326 CCDC144BQ3MJ40 725 aa5.72□□□□□ -1.49
CLK1-206ENST00000461326 OLFML2BQ68BL8 750 aa5.72□□□□□ -1.49
CLK1-206ENST00000461326 ANKS3Q6ZW76 656 aa5.72□□□□□ -1.49
CLK1-206ENST00000461326 LRP10Q7Z4F1 713 aa5.72□□□□□ -1.49
CLK1-206ENST00000461326 TAB3Q8N5C8 712 aaPredicted RBP5.72□□□□□ -1.49
CLK1-206ENST00000461326 PANK1Q8TE04 598 aa5.72□□□□□ -1.49
CLK1-206ENST00000461326 TEPSINQ96N21 525 aa5.72□□□□□ -1.49
CLK1-206ENST00000461326 TM9SF2Q99805 663 aa5.72□□□□□ -1.49
CLK1-206ENST00000461326 GMIPQ9P107 970 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms