RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 DUSP11O75319 330 aaKnown RBP17.46■□□□□ 0.39
DNMT3A-207ENST00000461228 FPGSQ05932 587 aa17.46■□□□□ 0.39
DNMT3A-207ENST00000461228 CTR9Q6PD62 1173 aa17.46■□□□□ 0.39
DNMT3A-207ENST00000461228 CCDC174Q6PII3 467 aa17.46■□□□□ 0.39
DNMT3A-207ENST00000461228 SH3RF1Q7Z6J0 888 aa17.46■□□□□ 0.39
DNMT3A-207ENST00000461228 KLHDC9Q8NEP7 349 aa17.46■□□□□ 0.39
DNMT3A-207ENST00000461228 RNPC3Q96LT9 517 aaKnown RBP17.46■□□□□ 0.39
DNMT3A-207ENST00000461228 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.46■□□□□ 0.39
DNMT3A-207ENST00000461228 FBXO28Q9NVF7 368 aa17.46■□□□□ 0.39
DNMT3A-207ENST00000461228 FBXO40Q9UH90 709 aa17.46■□□□□ 0.39
DNMT3A-207ENST00000461228 TBX21Q9UL17 535 aa17.46■□□□□ 0.39
DNMT3A-207ENST00000461228 TRANK1O15050 2925 aa17.46■□□□□ 0.39
DNMT3A-207ENST00000461228 FDX1P10109 184 aa17.45■□□□□ 0.38
DNMT3A-207ENST00000461228 ACLYP53396 1101 aa17.45■□□□□ 0.38
DNMT3A-207ENST00000461228 FAM83BQ5T0W9 1011 aa17.45■□□□□ 0.38
DNMT3A-207ENST00000461228 ANO1Q5XXA6 986 aa17.45■□□□□ 0.38
DNMT3A-207ENST00000461228 UPF3AQ9H1J1 476 aaKnown RBP17.45■□□□□ 0.38
DNMT3A-207ENST00000461228 ZNF287Q9HBT7 754 aa17.45■□□□□ 0.38
DNMT3A-207ENST00000461228 STARD7Q9NQZ5 370 aa17.45■□□□□ 0.38
DNMT3A-207ENST00000461228 IGKV6D-41A0A0C4DH26 115 aa17.44■□□□□ 0.38
DNMT3A-207ENST00000461228 PGK2P07205 417 aa17.44■□□□□ 0.38
DNMT3A-207ENST00000461228 FOSL2P15408 326 aa17.44■□□□□ 0.38
DNMT3A-207ENST00000461228 RAG1P15918 1043 aa17.44■□□□□ 0.38
DNMT3A-207ENST00000461228 RASA1P20936 1047 aa17.44■□□□□ 0.38
DNMT3A-207ENST00000461228 ITGB8P26012 769 aa17.44■□□□□ 0.38
DNMT3A-207ENST00000461228 PRAMEF19Q5SWL8 479 aa17.44■□□□□ 0.38
DNMT3A-207ENST00000461228 PRPF38AQ8NAV1 312 aaKnown RBP17.44■□□□□ 0.38
DNMT3A-207ENST00000461228 PCSK9Q8NBP7 692 aaKnown RBP17.44■□□□□ 0.38
DNMT3A-207ENST00000461228 GMCL1P1Q8NEA9 526 aa17.44■□□□□ 0.38
DNMT3A-207ENST00000461228 SYMPKQ92797 1274 aaKnown RBP17.44■□□□□ 0.38
DNMT3A-207ENST00000461228 SEZ6LQ9BYH1 1024 aa17.44■□□□□ 0.38
DNMT3A-207ENST00000461228 FAM184BQ9ULE4 1060 aa17.44■□□□□ 0.38
DNMT3A-207ENST00000461228 SLC4A4Q9Y6R1 1079 aa17.44■□□□□ 0.38
DNMT3A-207ENST00000461228 LCTP09848 1927 aa17.44■□□□□ 0.38
DNMT3A-207ENST00000461228 GBF1Q92538 1859 aa17.44■□□□□ 0.38
DNMT3A-207ENST00000461228 DCDC2CA8MYV0 355 aa17.43■□□□□ 0.38
DNMT3A-207ENST00000461228 PGK1P00558 417 aa17.43■□□□□ 0.38
DNMT3A-207ENST00000461228 GNAT2P19087 354 aa17.43■□□□□ 0.38
DNMT3A-207ENST00000461228 FAAP100Q0VG06 881 aa17.43■□□□□ 0.38
DNMT3A-207ENST00000461228 RASIP1Q5U651 963 aa17.43■□□□□ 0.38
DNMT3A-207ENST00000461228 SNRNP48Q6IEG0 339 aaKnown RBP17.43■□□□□ 0.38
DNMT3A-207ENST00000461228 FERMT2Q96AC1 680 aa17.43■□□□□ 0.38
DNMT3A-207ENST00000461228 FAM161BQ96MY7 647 aa17.43■□□□□ 0.38
DNMT3A-207ENST00000461228 LRRCC1Q9C099 1032 aa17.43■□□□□ 0.38
DNMT3A-207ENST00000461228 BOLA2Q9H3K6 86 aa17.43■□□□□ 0.38
DNMT3A-207ENST00000461228 ABHD16BQ9H3Z7 469 aa17.43■□□□□ 0.38
DNMT3A-207ENST00000461228 SLC38A10Q9HBR0 1119 aa17.43■□□□□ 0.38
DNMT3A-207ENST00000461228 BDP1A6H8Y1 2624 aa17.42■□□□□ 0.38
DNMT3A-207ENST00000461228 TANC1Q9C0D5 1861 aa17.42■□□□□ 0.38
DNMT3A-207ENST00000461228 CYP2D7A0A087X1C5 515 aa17.42■□□□□ 0.38
DNMT3A-207ENST00000461228 PQBP1O60828 265 aaKnown RBP17.42■□□□□ 0.38
DNMT3A-207ENST00000461228 NDUFB10O96000 172 aa17.42■□□□□ 0.38
DNMT3A-207ENST00000461228 TIMP1P01033 207 aa17.42■□□□□ 0.38
DNMT3A-207ENST00000461228 ZFYP08048 801 aaPredicted RBP17.42■□□□□ 0.38
DNMT3A-207ENST00000461228 DNAJB2P25686 324 aa17.42■□□□□ 0.38
DNMT3A-207ENST00000461228 CHST13Q8NET6 341 aa17.42■□□□□ 0.38
DNMT3A-207ENST00000461228 MKL1Q969V6 931 aa17.42■□□□□ 0.38
DNMT3A-207ENST00000461228 GLT1D1Q96MS3 346 aa17.42■□□□□ 0.38
DNMT3A-207ENST00000461228 STRBPQ96SI9 672 aaKnown RBP17.42■□□□□ 0.38
DNMT3A-207ENST00000461228 PUS7LQ9H0K6 701 aaKnown RBP17.42■□□□□ 0.38
DNMT3A-207ENST00000461228 TMEM39AQ9NV64 488 aa17.42■□□□□ 0.38
DNMT3A-207ENST00000461228 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.41■□□□□ 0.38
DNMT3A-207ENST00000461228 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.41■□□□□ 0.38
DNMT3A-207ENST00000461228 SNAI1O95863 264 aaPredicted RBP17.41■□□□□ 0.38
DNMT3A-207ENST00000461228 TAL1P17542 331 aaPredicted RBP17.41■□□□□ 0.38
DNMT3A-207ENST00000461228 GJA9P57773 515 aa17.41■□□□□ 0.38
DNMT3A-207ENST00000461228 PPIGQ13427 754 aaKnown RBP eCLIP17.41■□□□□ 0.385e-8■■□□□ 12.3
DNMT3A-207ENST00000461228 MFSD5Q6N075 450 aa17.41■□□□□ 0.38
DNMT3A-207ENST00000461228 PSRC1Q6PGN9 363 aaPredicted RBP17.41■□□□□ 0.38
DNMT3A-207ENST00000461228 KBTBD3Q8NAB2 608 aa17.41■□□□□ 0.38
DNMT3A-207ENST00000461228 MYLIPQ8WY64 445 aa17.41■□□□□ 0.38
DNMT3A-207ENST00000461228 APPBP2Q92624 585 aa17.41■□□□□ 0.38
DNMT3A-207ENST00000461228 FEM1BQ9UK73 627 aa17.41■□□□□ 0.38
DNMT3A-207ENST00000461228 A0A0U1RQG5 324 aaPredicted RBP17.4■□□□□ 0.38
DNMT3A-207ENST00000461228 F5H6K3 240 aa17.4■□□□□ 0.38
DNMT3A-207ENST00000461228 SMIM22K7EJ46 135 aa17.4■□□□□ 0.38
DNMT3A-207ENST00000461228 MYCNP04198 464 aaPredicted RBP17.4■□□□□ 0.38
DNMT3A-207ENST00000461228 CDK7P50613 346 aa17.4■□□□□ 0.38
DNMT3A-207ENST00000461228 EPHB4P54760 987 aa17.4■□□□□ 0.38
DNMT3A-207ENST00000461228 KLRC3Q07444 240 aa17.4■□□□□ 0.38
DNMT3A-207ENST00000461228 PPP4R3BQ5MIZ7 849 aa17.4■□□□□ 0.38
DNMT3A-207ENST00000461228 FGD4Q96M96 766 aa17.4■□□□□ 0.38
DNMT3A-207ENST00000461228 SPC25Q9HBM1 224 aa17.4■□□□□ 0.38
DNMT3A-207ENST00000461228 ECHDC1Q9NTX5 307 aa17.4■□□□□ 0.38
DNMT3A-207ENST00000461228 XIRP2A4UGR9 3374 aa17.4■□□□□ 0.38
DNMT3A-207ENST00000461228 GSG1L2A8MUP6 293 aa17.39■□□□□ 0.37
DNMT3A-207ENST00000461228 LRRFIP1Q32MZ4 808 aaKnown RBP17.39■□□□□ 0.37
DNMT3A-207ENST00000461228 CCDC129Q6ZRS4 1044 aa17.39■□□□□ 0.37
DNMT3A-207ENST00000461228 DDX11Q96FC9 970 aa17.39■□□□□ 0.37
DNMT3A-207ENST00000461228 GPATCH3Q96I76 525 aa17.39■□□□□ 0.37
DNMT3A-207ENST00000461228 KATNBL1Q9H079 304 aa17.39■□□□□ 0.37
DNMT3A-207ENST00000461228 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.39■□□□□ 0.37
DNMT3A-207ENST00000461228 APBB1O00213 710 aa17.38■□□□□ 0.37
DNMT3A-207ENST00000461228 PLA2G6O60733 806 aa17.38■□□□□ 0.37
DNMT3A-207ENST00000461228 ZBED4O75132 1171 aa17.38■□□□□ 0.37
DNMT3A-207ENST00000461228 CABYRO75952 493 aa17.38■□□□□ 0.37
DNMT3A-207ENST00000461228 TTLL1O95922 423 aa17.38■□□□□ 0.37
DNMT3A-207ENST00000461228 ACVR2BQ13705 512 aa17.38■□□□□ 0.37
DNMT3A-207ENST00000461228 SLFNL1Q499Z3 407 aa17.38■□□□□ 0.37
DNMT3A-207ENST00000461228 FAM126BQ8IXS8 530 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms