RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 CSADQ9Y600 493 aa8.72□□□□□ -1.01
RTN4-212ENST00000461004 ZHX2Q9Y6X8 837 aa8.72□□□□□ -1.01
RTN4-212ENST00000461004 CCDC171Q6TFL3 1326 aa8.72□□□□□ -1.01
RTN4-212ENST00000461004 DDX60LQ5H9U9 1706 aaKnown RBP8.71□□□□□ -1.01
RTN4-212ENST00000461004 NAV1Q8NEY1 1877 aa8.71□□□□□ -1.01
RTN4-212ENST00000461004 SIAH2O43255 324 aa8.71□□□□□ -1.02
RTN4-212ENST00000461004 CTNND1O60716 968 aaKnown RBP8.71□□□□□ -1.02
RTN4-212ENST00000461004 PRDM1O75626 825 aa8.71□□□□□ -1.02
RTN4-212ENST00000461004 GH2P01242 217 aa8.71□□□□□ -1.02
RTN4-212ENST00000461004 FGAP02671 866 aa8.71□□□□□ -1.02
RTN4-212ENST00000461004 AKR1B1P15121 316 aa8.71□□□□□ -1.02
RTN4-212ENST00000461004 PTPRAP18433 802 aa8.71□□□□□ -1.02
RTN4-212ENST00000461004 GNAT2P19087 354 aa8.71□□□□□ -1.02
RTN4-212ENST00000461004 GUCY1A2P33402 732 aa8.71□□□□□ -1.02
RTN4-212ENST00000461004 MAP2K2P36507 400 aa8.71□□□□□ -1.02
RTN4-212ENST00000461004 TDO2P48775 406 aa8.71□□□□□ -1.02
RTN4-212ENST00000461004 CDK8P49336 464 aa8.71□□□□□ -1.02
RTN4-212ENST00000461004 NOGQ13253 232 aa8.71□□□□□ -1.02
RTN4-212ENST00000461004 SBK1Q52WX2 424 aa8.71□□□□□ -1.02
RTN4-212ENST00000461004 ZNF697Q5TEC3 545 aa8.71□□□□□ -1.02
RTN4-212ENST00000461004 TATDN1Q6P1N9 297 aa8.71□□□□□ -1.02
RTN4-212ENST00000461004 ZBTB33Q86T24 672 aa8.71□□□□□ -1.02
RTN4-212ENST00000461004 ERO1BQ86YB8 467 aa8.71□□□□□ -1.02
RTN4-212ENST00000461004 BRI3BPQ8WY22 251 aa8.71□□□□□ -1.02
RTN4-212ENST00000461004 EHD4Q9H223 541 aa8.71□□□□□ -1.02
RTN4-212ENST00000461004 PCDHB9Q9Y5E1 797 aa8.71□□□□□ -1.02
RTN4-212ENST00000461004 V9GY48 417 aaPredicted RBP8.71□□□□□ -1.02
RTN4-212ENST00000461004 UNCXA6NJT0 531 aa8.7□□□□□ -1.02
RTN4-212ENST00000461004 IGF2BP3O00425 579 aaKnown RBP eCLIP8.7□□□□□ -1.02
RTN4-212ENST00000461004 WNT7AO00755 349 aa8.7□□□□□ -1.02
RTN4-212ENST00000461004 HSPA1AP0DMV8 641 aaKnown RBP8.7□□□□□ -1.02
RTN4-212ENST00000461004 HSPA1BP0DMV9 641 aaKnown RBP8.7□□□□□ -1.02
RTN4-212ENST00000461004 HAND2P61296 217 aa8.7□□□□□ -1.02
RTN4-212ENST00000461004 PTH1RQ03431 593 aa8.7□□□□□ -1.02
RTN4-212ENST00000461004 PPARAQ07869 468 aa8.7□□□□□ -1.02
RTN4-212ENST00000461004 PPIL2Q13356 520 aa8.7□□□□□ -1.02
RTN4-212ENST00000461004 MOGSQ13724 837 aa8.7□□□□□ -1.02
RTN4-212ENST00000461004 CERKLQ49MI3 558 aaPredicted RBP8.7□□□□□ -1.02
RTN4-212ENST00000461004 BMP2KLQ5H9B9 411 aa8.7□□□□□ -1.02
RTN4-212ENST00000461004 GIMAP6Q6P9H5 292 aa8.7□□□□□ -1.02
RTN4-212ENST00000461004 C16orf86Q6ZW13 317 aa8.7□□□□□ -1.02
RTN4-212ENST00000461004 ZNF598Q86UK7 904 aaKnown RBP8.7□□□□□ -1.02
RTN4-212ENST00000461004 CLEC10AQ8IUN9 316 aa8.7□□□□□ -1.02
RTN4-212ENST00000461004 MRGPRX2Q96LB1 330 aa8.7□□□□□ -1.02
RTN4-212ENST00000461004 UCN2Q96RP3 112 aa8.7□□□□□ -1.02
RTN4-212ENST00000461004 NAPBQ9H115 298 aa8.7□□□□□ -1.02
RTN4-212ENST00000461004 R3HDMLQ9H3Y0 253 aa8.7□□□□□ -1.02
RTN4-212ENST00000461004 PICK1Q9NRD5 415 aa8.7□□□□□ -1.02
RTN4-212ENST00000461004 ARPP21Q9UBL0 812 aaPredicted RBP8.7□□□□□ -1.02
RTN4-212ENST00000461004 ZBTB21Q9ULJ3 1066 aa8.7□□□□□ -1.02
RTN4-212ENST00000461004 AFG3L2Q9Y4W6 797 aa8.7□□□□□ -1.02
RTN4-212ENST00000461004 TRIM75PA6NK02 468 aa8.69□□□□□ -1.02
RTN4-212ENST00000461004 HIP1O00291 1037 aa8.69□□□□□ -1.02
RTN4-212ENST00000461004 FOXN1O15353 648 aa8.69□□□□□ -1.02
RTN4-212ENST00000461004 SGSM2O43147 1006 aa8.69□□□□□ -1.02
RTN4-212ENST00000461004 ZBTB48P10074 688 aaPredicted RBP8.69□□□□□ -1.02
RTN4-212ENST00000461004 VARSP26640 1264 aaKnown RBP8.69□□□□□ -1.02
RTN4-212ENST00000461004 TM4SF4P48230 202 aa8.69□□□□□ -1.02
RTN4-212ENST00000461004 PPATQ06203 517 aa8.69□□□□□ -1.02
RTN4-212ENST00000461004 SPP2Q13103 211 aa8.69□□□□□ -1.02
RTN4-212ENST00000461004 SEPT2Q15019 361 aa8.69□□□□□ -1.02
RTN4-212ENST00000461004 ALX1Q15699 326 aa8.69□□□□□ -1.02
RTN4-212ENST00000461004 ABCB5Q2M3G0 1257 aa8.69□□□□□ -1.02
RTN4-212ENST00000461004 TRIM67Q6ZTA4 783 aa8.69□□□□□ -1.02
RTN4-212ENST00000461004 TICAM2Q86XR7 235 aa8.69□□□□□ -1.02
RTN4-212ENST00000461004 SIAH1Q8IUQ4 282 aa8.69□□□□□ -1.02
RTN4-212ENST00000461004 TRMT44Q8IYL2 757 aaKnown RBP8.69□□□□□ -1.02
RTN4-212ENST00000461004 EHBP1Q8NDI1 1231 aa8.69□□□□□ -1.02
RTN4-212ENST00000461004 ACER1Q8TDN7 264 aa8.69□□□□□ -1.02
RTN4-212ENST00000461004 CALR3Q96L12 384 aaKnown RBP8.69□□□□□ -1.02
RTN4-212ENST00000461004 NACAP1Q9BZK3 213 aa8.69□□□□□ -1.02
RTN4-212ENST00000461004 RNF186Q9NXI6 227 aa8.69□□□□□ -1.02
RTN4-212ENST00000461004 PCNTO95613 3336 aa8.69□□□□□ -1.02
RTN4-212ENST00000461004 CCL15-CCL14A0A0B4J2E2 113 aa8.68□□□□□ -1.02
RTN4-212ENST00000461004 A0A1W2PRG0 241 aa8.68□□□□□ -1.02
RTN4-212ENST00000461004 MANSC4A6NHS7 340 aaPredicted RBP8.68□□□□□ -1.02
RTN4-212ENST00000461004 USP17L5A8MUK1 530 aa8.68□□□□□ -1.02
RTN4-212ENST00000461004 BTBD19C9JJ37 291 aa8.68□□□□□ -1.02
RTN4-212ENST00000461004 PIK3CDO00329 1044 aa8.68□□□□□ -1.02
RTN4-212ENST00000461004 MPHOSPH10O00566 681 aaKnown RBP8.68□□□□□ -1.02
RTN4-212ENST00000461004 TRPA1O75762 1119 aa8.68□□□□□ -1.02
RTN4-212ENST00000461004 TBC1D8O95759 1140 aa8.68□□□□□ -1.02
RTN4-212ENST00000461004 RASA1P20936 1047 aa8.68□□□□□ -1.02
RTN4-212ENST00000461004 RAB3GAP1Q15042 981 aa8.68□□□□□ -1.02
RTN4-212ENST00000461004 CCL15Q16663 113 aa8.68□□□□□ -1.02
RTN4-212ENST00000461004 FAM47AQ5JRC9 791 aa8.68□□□□□ -1.02
RTN4-212ENST00000461004 GPAT2Q6NUI2 795 aa8.68□□□□□ -1.02
RTN4-212ENST00000461004 TBC1D10CQ8IV04 446 aa8.68□□□□□ -1.02
RTN4-212ENST00000461004 FAM43AQ8N2R8 423 aa8.68□□□□□ -1.02
RTN4-212ENST00000461004 CCDC82Q8N4S0 544 aa8.68□□□□□ -1.02
RTN4-212ENST00000461004 SWAP70Q9UH65 585 aa8.68□□□□□ -1.02
RTN4-212ENST00000461004 KCNH4Q9UQ05 1017 aa8.68□□□□□ -1.02
RTN4-212ENST00000461004 TAF6LQ9Y6J9 622 aa8.68□□□□□ -1.02
RTN4-212ENST00000461004 CXCL11O14625 94 aa8.67□□□□□ -1.02
RTN4-212ENST00000461004 GDF9O60383 454 aa8.67□□□□□ -1.02
RTN4-212ENST00000461004 ASNSP08243 561 aa8.67□□□□□ -1.02
RTN4-212ENST00000461004 SOX11P35716 441 aa8.67□□□□□ -1.02
RTN4-212ENST00000461004 GTF2A2P52657 109 aa8.67□□□□□ -1.02
RTN4-212ENST00000461004 HMGCS2P54868 508 aa8.67□□□□□ -1.02
RTN4-212ENST00000461004 MAP2K1Q02750 393 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms