RNA–Protein interactions for RNA: ENST00000460944.6

DDR1-241, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,248 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-241ENST00000460944 GABRQQ9UN88 632 aa21.55■■□□□ 1.04
DDR1-241ENST00000460944 PLXNB2O15031 1838 aa21.55■■□□□ 1.04
DDR1-241ENST00000460944 PRC1O43663 620 aa21.54■■□□□ 1.04
DDR1-241ENST00000460944 EIF5BO60841 1220 aaKnown RBP21.54■■□□□ 1.04
DDR1-241ENST00000460944 SLC25A27O95847 323 aa21.54■■□□□ 1.04
DDR1-241ENST00000460944 STAT3P40763 770 aa21.54■■□□□ 1.04
DDR1-241ENST00000460944 ZNF543Q08ER8 600 aa21.54■■□□□ 1.04
DDR1-241ENST00000460944 SLC9C1Q4G0N8 1177 aa21.54■■□□□ 1.04
DDR1-241ENST00000460944 GPATCH4Q5T3I0 446 aaKnown RBP21.54■■□□□ 1.04
DDR1-241ENST00000460944 NCAPG2Q86XI2 1143 aa21.54■■□□□ 1.04
DDR1-241ENST00000460944 NUDT12Q9BQG2 462 aa21.54■■□□□ 1.04
DDR1-241ENST00000460944 MTA3Q9BTC8 594 aa21.54■■□□□ 1.04
DDR1-241ENST00000460944 TEX13BQ9BXU2 312 aa21.54■■□□□ 1.04
DDR1-241ENST00000460944 MROH8Q9H579 483 aa21.54■■□□□ 1.04
DDR1-241ENST00000460944 SLC38A10Q9HBR0 1119 aa21.54■■□□□ 1.04
DDR1-241ENST00000460944 GPCPD1Q9NPB8 672 aa21.54■■□□□ 1.04
DDR1-241ENST00000460944 ZNF214Q9UL59 606 aaPredicted RBP21.54■■□□□ 1.04
DDR1-241ENST00000460944 SNHG28P0DPA3 235 aa21.53■■□□□ 1.04
DDR1-241ENST00000460944 ERCC3P19447 782 aa21.53■■□□□ 1.04
DDR1-241ENST00000460944 HSPA4P34932 840 aa21.53■■□□□ 1.04
DDR1-241ENST00000460944 ANTXR2P58335 489 aa21.53■■□□□ 1.04
DDR1-241ENST00000460944 IRF5Q13568 498 aa21.53■■□□□ 1.04
DDR1-241ENST00000460944 TSGA10IPQ3SY00 556 aa21.53■■□□□ 1.04
DDR1-241ENST00000460944 NBPF11Q86T75 865 aa21.53■■□□□ 1.04
DDR1-241ENST00000460944 CPXCR1Q8N123 301 aa21.53■■□□□ 1.04
DDR1-241ENST00000460944 REPS2Q8NFH8 660 aa21.53■■□□□ 1.04
DDR1-241ENST00000460944 TMEM87BQ96K49 555 aa21.53■■□□□ 1.04
DDR1-241ENST00000460944 NEK1Q96PY6 1258 aa21.53■■□□□ 1.04
DDR1-241ENST00000460944 PRR12Q9ULL5 1215 aa21.53■■□□□ 1.04
DDR1-241ENST00000460944 OAZ1P54368 228 aa21.52■■□□□ 1.04
DDR1-241ENST00000460944 ASPRV1Q53RT3 343 aa21.52■■□□□ 1.04
DDR1-241ENST00000460944 SYDE2Q5VT97 1194 aa21.52■■□□□ 1.04
DDR1-241ENST00000460944 SNRNP48Q6IEG0 339 aaKnown RBP21.52■■□□□ 1.04
DDR1-241ENST00000460944 RIOX2Q8IUF8 465 aa21.52■■□□□ 1.04
DDR1-241ENST00000460944 SLAIN1Q8ND83 568 aa21.52■■□□□ 1.04
DDR1-241ENST00000460944 ATP2A1O14983 1001 aa21.51■■□□□ 1.03
DDR1-241ENST00000460944 PARP1P09874 1014 aaKnown RBP21.51■■□□□ 1.03
DDR1-241ENST00000460944 GRK4P32298 578 aa21.51■■□□□ 1.03
DDR1-241ENST00000460944 SLC16A2P36021 539 aa21.51■■□□□ 1.03
DDR1-241ENST00000460944 RGS2P41220 211 aa21.51■■□□□ 1.03
DDR1-241ENST00000460944 TTBK2Q6IQ55 1244 aa21.51■■□□□ 1.03
DDR1-241ENST00000460944 BTNL9Q6UXG8 535 aa21.51■■□□□ 1.03
DDR1-241ENST00000460944 RASEFQ8IZ41 740 aa21.51■■□□□ 1.03
DDR1-241ENST00000460944 RAVER2Q9HCJ3 691 aaKnown RBP21.51■■□□□ 1.03
DDR1-241ENST00000460944 SLC15A5A6NIM6 579 aa21.5■■□□□ 1.03
DDR1-241ENST00000460944 CCDC85CA6NKD9 419 aa21.5■■□□□ 1.03
DDR1-241ENST00000460944 STRNO43815 780 aa21.5■■□□□ 1.03
DDR1-241ENST00000460944 ADCY3O60266 1144 aa21.5■■□□□ 1.03
DDR1-241ENST00000460944 HMGB1P09429 215 aaKnown RBP21.5■■□□□ 1.03
DDR1-241ENST00000460944 GOLGA8HP0CJ92 632 aa21.5■■□□□ 1.03
DDR1-241ENST00000460944 PTPREP23469 700 aa21.5■■□□□ 1.03
DDR1-241ENST00000460944 SLC4A3P48751 1232 aa21.5■■□□□ 1.03
DDR1-241ENST00000460944 NFXL1Q6ZNB6 911 aa21.5■■□□□ 1.03
DDR1-241ENST00000460944 CATIPQ7Z7H3 387 aa21.5■■□□□ 1.03
DDR1-241ENST00000460944 TMTC2Q8N394 836 aa21.5■■□□□ 1.03
DDR1-241ENST00000460944 IGDCC4Q8TDY8 1250 aa21.5■■□□□ 1.03
DDR1-241ENST00000460944 KCNB2Q92953 911 aa21.5■■□□□ 1.03
DDR1-241ENST00000460944 BIN2Q9UBW5 565 aaPredicted RBP21.5■■□□□ 1.03
DDR1-241ENST00000460944 GJD2Q9UKL4 321 aa21.5■■□□□ 1.03
DDR1-241ENST00000460944 SH2B2O14492 632 aaPredicted RBP21.49■■□□□ 1.03
DDR1-241ENST00000460944 CYP2B6P20813 491 aa21.49■■□□□ 1.03
DDR1-241ENST00000460944 MAP2K5Q13163 448 aa21.49■■□□□ 1.03
DDR1-241ENST00000460944 GRB14Q14449 540 aa21.49■■□□□ 1.03
DDR1-241ENST00000460944 MORN1Q5T089 497 aa21.49■■□□□ 1.03
DDR1-241ENST00000460944 PXYLP1Q8TE99 480 aa21.49■■□□□ 1.03
DDR1-241ENST00000460944 SH3TC2Q8TF17 1288 aa21.49■■□□□ 1.03
DDR1-241ENST00000460944 ARMC5Q96C12 935 aa21.49■■□□□ 1.03
DDR1-241ENST00000460944 ZNF236Q9UL36 1845 aa21.49■■□□□ 1.03
DDR1-241ENST00000460944 WDR19Q8NEZ3 1342 aa21.49■■□□□ 1.03
DDR1-241ENST00000460944 ZNFX1Q9P2E3 1918 aaKnown RBP21.49■■□□□ 1.03
DDR1-241ENST00000460944 HTTP42858 3142 aa21.49■■□□□ 1.03
DDR1-241ENST00000460944 CCDC69A6NI79 296 aa21.48■■□□□ 1.03
DDR1-241ENST00000460944 FCER1AP12319 257 aa21.48■■□□□ 1.03
DDR1-241ENST00000460944 ADCK5Q3MIX3 580 aa21.48■■□□□ 1.03
DDR1-241ENST00000460944 CCDC174Q6PII3 467 aa21.48■■□□□ 1.03
DDR1-241ENST00000460944 DHX32Q7L7V1 743 aaKnown RBP21.48■■□□□ 1.03
DDR1-241ENST00000460944 ABRAQ8N0Z2 381 aa21.48■■□□□ 1.03
DDR1-241ENST00000460944 JAKMIP1Q96N16 626 aaKnown RBP21.48■■□□□ 1.03
DDR1-241ENST00000460944 APBA2Q99767 749 aa21.48■■□□□ 1.03
DDR1-241ENST00000460944 USP26Q9BXU7 913 aa21.48■■□□□ 1.03
DDR1-241ENST00000460944 LY9Q9HBG7 655 aa21.48■■□□□ 1.03
DDR1-241ENST00000460944 SNX14Q9Y5W7 946 aa21.48■■□□□ 1.03
DDR1-241ENST00000460944 MYH6P13533 1939 aa21.48■■□□□ 1.03
DDR1-241ENST00000460944 KIAA0100Q14667 2235 aaKnown RBP21.47■■□□□ 1.03
DDR1-241ENST00000460944 DHX16O60231 1041 aaKnown RBP21.47■■□□□ 1.03
DDR1-241ENST00000460944 XRCC5P13010 732 aaKnown RBP21.47■■□□□ 1.03
DDR1-241ENST00000460944 PSMA5P28066 241 aa21.47■■□□□ 1.03
DDR1-241ENST00000460944 LIFRP42702 1097 aa21.47■■□□□ 1.03
DDR1-241ENST00000460944 SNAP25P60880 206 aa21.47■■□□□ 1.03
DDR1-241ENST00000460944 UBXN2AP68543 259 aa21.47■■□□□ 1.03
DDR1-241ENST00000460944 KCTD2Q14681 263 aa21.47■■□□□ 1.03
DDR1-241ENST00000460944 TRMT44Q8IYL2 757 aaKnown RBP21.47■■□□□ 1.03
DDR1-241ENST00000460944 MMP19Q99542 508 aa21.47■■□□□ 1.03
DDR1-241ENST00000460944 UBA5Q9GZZ9 404 aa21.47■■□□□ 1.03
DDR1-241ENST00000460944 RANBP17Q9H2T7 1088 aaKnown RBP21.47■■□□□ 1.03
DDR1-241ENST00000460944 SENP2Q9HC62 589 aa21.47■■□□□ 1.03
DDR1-241ENST00000460944 SLC5A4Q9NY91 659 aa21.47■■□□□ 1.03
DDR1-241ENST00000460944 FBXO40Q9UH90 709 aa21.47■■□□□ 1.03
DDR1-241ENST00000460944 PNMA2Q9UL42 364 aa21.47■■□□□ 1.03
DDR1-241ENST00000460944 DDAH1O94760 285 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms