RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 DISP2A7MBM2 1401 aa6.37□□□□□ -1.39
SF3A3-202ENST00000460925 KDRP35968 1356 aa6.37□□□□□ -1.39
SF3A3-202ENST00000460925 MEIS3P2A8K0S8 358 aa6.37□□□□□ -1.39
SF3A3-202ENST00000460925 FSCN2O14926 492 aa6.37□□□□□ -1.39
SF3A3-202ENST00000460925 SMAD7O15105 426 aaKnown RBP6.37□□□□□ -1.39
SF3A3-202ENST00000460925 MCM4P33991 863 aa6.37□□□□□ -1.39
SF3A3-202ENST00000460925 CASP7P55210 303 aa6.37□□□□□ -1.39
SF3A3-202ENST00000460925 CLCQ05315 142 aa6.37□□□□□ -1.39
SF3A3-202ENST00000460925 MAP1SQ66K74 1059 aaPredicted RBP6.37□□□□□ -1.39
SF3A3-202ENST00000460925 HGSNATQ68CP4 663 aa6.37□□□□□ -1.39
SF3A3-202ENST00000460925 SDE2Q6IQ49 451 aa6.37□□□□□ -1.39
SF3A3-202ENST00000460925 MPRIPQ6WCQ1 1025 aa6.37□□□□□ -1.39
SF3A3-202ENST00000460925 CCDC81Q6ZN84 652 aa6.37□□□□□ -1.39
SF3A3-202ENST00000460925 C1orf229Q6ZS94 237 aaPredicted RBP6.37□□□□□ -1.39
SF3A3-202ENST00000460925 CERS3Q8IU89 383 aa6.37□□□□□ -1.39
SF3A3-202ENST00000460925 UNC5CLQ8IV45 518 aa6.37□□□□□ -1.39
SF3A3-202ENST00000460925 MAP4K3Q8IVH8 894 aa6.37□□□□□ -1.39
SF3A3-202ENST00000460925 FAM169BQ8N8A8 192 aa6.37□□□□□ -1.39
SF3A3-202ENST00000460925 C19orf47Q8N9M1 422 aaKnown RBP6.37□□□□□ -1.39
SF3A3-202ENST00000460925 KLHL23Q8NBE8 558 aa6.37□□□□□ -1.39
SF3A3-202ENST00000460925 ACDQ96AP0 544 aa6.37□□□□□ -1.39
SF3A3-202ENST00000460925 PHACTR3Q96KR7 559 aa6.37□□□□□ -1.39
SF3A3-202ENST00000460925 RGS17Q9UGC6 210 aaPredicted RBP6.37□□□□□ -1.39
SF3A3-202ENST00000460925 SNCAIPQ9Y6H5 919 aa6.37□□□□□ -1.39
SF3A3-202ENST00000460925 SCN11AQ9UI33 1791 aa6.36□□□□□ -1.39
SF3A3-202ENST00000460925 OVOS2A0A0G2JMS6 1433 aa6.36□□□□□ -1.39
SF3A3-202ENST00000460925 SPATA31A1Q5TZJ5 1347 aa6.36□□□□□ -1.39
SF3A3-202ENST00000460925 SPATA31A5Q5VU36 1347 aa6.36□□□□□ -1.39
SF3A3-202ENST00000460925 SPATA31A7Q8IWB4 1347 aa6.36□□□□□ -1.39
SF3A3-202ENST00000460925 SYNGAP1Q96PV0 1343 aa6.36□□□□□ -1.39
SF3A3-202ENST00000460925 LINC01387J3KSC0 135 aa6.36□□□□□ -1.39
SF3A3-202ENST00000460925 HNRNPUQ00839 825 aaKnown RBP eCLIP6.36□□□□□ -1.39
SF3A3-202ENST00000460925 RASA3Q14644 834 aa6.36□□□□□ -1.39
SF3A3-202ENST00000460925 POU4F3Q15319 338 aa6.36□□□□□ -1.39
SF3A3-202ENST00000460925 MSL1Q68DK7 614 aa6.36□□□□□ -1.39
SF3A3-202ENST00000460925 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.36□□□□□ -1.39
SF3A3-202ENST00000460925 GK5Q6ZS86 529 aa6.36□□□□□ -1.39
SF3A3-202ENST00000460925 JAZF1Q86VZ6 243 aa6.36□□□□□ -1.39
SF3A3-202ENST00000460925 LSRQ86X29 649 aaPredicted RBP6.36□□□□□ -1.39
SF3A3-202ENST00000460925 NLGN1Q8N2Q7 840 aa6.36□□□□□ -1.39
SF3A3-202ENST00000460925 GPBAR1Q8TDU6 330 aa6.36□□□□□ -1.39
SF3A3-202ENST00000460925 KCNB2Q92953 911 aa6.36□□□□□ -1.39
SF3A3-202ENST00000460925 PLEKHF1Q96S99 279 aa6.36□□□□□ -1.39
SF3A3-202ENST00000460925 CORO1BQ9BR76 489 aa6.36□□□□□ -1.39
SF3A3-202ENST00000460925 CCDC113Q9H0I3 377 aa6.36□□□□□ -1.39
SF3A3-202ENST00000460925 NUDCQ9Y266 331 aa6.36□□□□□ -1.39
SF3A3-202ENST00000460925 R3HCC1Q9Y3T6 440 aaKnown RBP6.36□□□□□ -1.39
SF3A3-202ENST00000460925 PCDHB14Q9Y5E9 798 aa6.36□□□□□ -1.39
SF3A3-202ENST00000460925 ITGB4P16144 1822 aa6.36□□□□□ -1.39
SF3A3-202ENST00000460925 TNS2Q63HR2 1409 aa6.35□□□□□ -1.39
SF3A3-202ENST00000460925 M0R082 166 aa6.35□□□□□ -1.39
SF3A3-202ENST00000460925 APAF1O14727 1248 aa6.35□□□□□ -1.39
SF3A3-202ENST00000460925 OIP5O43482 229 aa6.35□□□□□ -1.39
SF3A3-202ENST00000460925 NCLP19338 710 aaKnown RBP6.35□□□□□ -1.39
SF3A3-202ENST00000460925 KRT76Q01546 638 aa6.35□□□□□ -1.39
SF3A3-202ENST00000460925 SUZ12Q15022 739 aaKnown RBP6.35□□□□□ -1.39
SF3A3-202ENST00000460925 VPS72Q15906 364 aa6.35□□□□□ -1.39
SF3A3-202ENST00000460925 KIF4BQ2VIQ3 1234 aa6.35□□□□□ -1.39
SF3A3-202ENST00000460925 LRRFIP1Q32MZ4 808 aaKnown RBP6.35□□□□□ -1.39
SF3A3-202ENST00000460925 EGFLAMQ63HQ2 1017 aa6.35□□□□□ -1.39
SF3A3-202ENST00000460925 CHSY3Q70JA7 882 aa6.35□□□□□ -1.39
SF3A3-202ENST00000460925 WFDC8Q8IUA0 241 aa6.35□□□□□ -1.39
SF3A3-202ENST00000460925 CNPY4Q8N129 248 aa6.35□□□□□ -1.39
SF3A3-202ENST00000460925 TAB3Q8N5C8 712 aaPredicted RBP6.35□□□□□ -1.39
SF3A3-202ENST00000460925 ZNF417Q8TAU3 575 aa6.35□□□□□ -1.39
SF3A3-202ENST00000460925 IPO4Q8TEX9 1081 aaKnown RBP6.35□□□□□ -1.39
SF3A3-202ENST00000460925 EDARADDQ8WWZ3 215 aa6.35□□□□□ -1.39
SF3A3-202ENST00000460925 SLC7A3Q8WY07 619 aa6.35□□□□□ -1.39
SF3A3-202ENST00000460925 BTBD6Q96KE9 485 aa6.35□□□□□ -1.39
SF3A3-202ENST00000460925 DEPDC7Q96QD5 511 aa6.35□□□□□ -1.39
SF3A3-202ENST00000460925 ZNF587Q96SQ5 575 aaPredicted RBP6.35□□□□□ -1.39
SF3A3-202ENST00000460925 CARD10Q9BWT7 1032 aa6.35□□□□□ -1.39
SF3A3-202ENST00000460925 CCDC86Q9H6F5 360 aaKnown RBP6.35□□□□□ -1.39
SF3A3-202ENST00000460925 PRDM16Q9HAZ2 1276 aa6.35□□□□□ -1.39
SF3A3-202ENST00000460925 SNTG2Q9NY99 539 aa6.35□□□□□ -1.39
SF3A3-202ENST00000460925 ACTR10Q9NZ32 417 aa6.35□□□□□ -1.39
SF3A3-202ENST00000460925 PCDHA4Q9UN74 947 aa6.35□□□□□ -1.39
SF3A3-202ENST00000460925 RGS12O14924 1447 aa6.34□□□□□ -1.39
SF3A3-202ENST00000460925 SBF2Q86WG5 1849 aa6.34□□□□□ -1.39
SF3A3-202ENST00000460925 SIPA1L3O60292 1781 aaPredicted RBP6.34□□□□□ -1.39
SF3A3-202ENST00000460925 ERBB4Q15303 1308 aa6.34□□□□□ -1.39
SF3A3-202ENST00000460925 TERTO14746 1132 aaKnown RBP6.34□□□□□ -1.39
SF3A3-202ENST00000460925 ZNF862O60290 1169 aa6.34□□□□□ -1.39
SF3A3-202ENST00000460925 SLURP2P0DP57 97 aa6.34□□□□□ -1.39
SF3A3-202ENST00000460925 MAOBP27338 520 aa6.34□□□□□ -1.39
SF3A3-202ENST00000460925 COL9A3Q14050 684 aaPredicted RBP6.34□□□□□ -1.39
SF3A3-202ENST00000460925 DCTN1Q14203 1278 aa6.34□□□□□ -1.39
SF3A3-202ENST00000460925 SETDB1Q15047 1291 aa6.34□□□□□ -1.39
SF3A3-202ENST00000460925 DDR2Q16832 855 aa6.34□□□□□ -1.39
SF3A3-202ENST00000460925 MTHFSDQ2M296 383 aaKnown RBP6.34□□□□□ -1.39
SF3A3-202ENST00000460925 HP1BP3Q5SSJ5 553 aaPredicted RBP6.34□□□□□ -1.39
SF3A3-202ENST00000460925 CYFIP1Q7L576 1253 aa6.34□□□□□ -1.39
SF3A3-202ENST00000460925 TCP11L2Q8N4U5 519 aa6.34□□□□□ -1.39
SF3A3-202ENST00000460925 SLC16A10Q8TF71 515 aa6.34□□□□□ -1.39
SF3A3-202ENST00000460925 RAPGEF4Q8WZA2 1011 aa6.34□□□□□ -1.39
SF3A3-202ENST00000460925 SRPK1Q96SB4 655 aaKnown RBP6.34□□□□□ -1.39
SF3A3-202ENST00000460925 TM9SF2Q99805 663 aa6.34□□□□□ -1.39
SF3A3-202ENST00000460925 THUMPD2Q9BTF0 503 aaKnown RBP6.34□□□□□ -1.39
SF3A3-202ENST00000460925 PRDM10Q9NQV6 1147 aa6.34□□□□□ -1.39
SF3A3-202ENST00000460925 KDM6AO15550 1401 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms