RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 FTSJ3Q8IY81 847 aaKnown RBP7.06□□□□□ -1.28
PTPN12-209ENST00000460731 CMTR1Q8N1G2 835 aaKnown RBP7.06□□□□□ -1.28
PTPN12-209ENST00000460731 ANKRD44Q8N8A2 993 aa7.06□□□□□ -1.28
PTPN12-209ENST00000460731 CNBD1Q8NA66 436 aa7.06□□□□□ -1.28
PTPN12-209ENST00000460731 MEIS3Q99687 375 aa7.06□□□□□ -1.28
PTPN12-209ENST00000460731 C9orf78Q9NZ63 289 aaPredicted RBP7.06□□□□□ -1.28
PTPN12-209ENST00000460731 ABCC12Q96J65 1359 aa7.06□□□□□ -1.28
PTPN12-209ENST00000460731 PDE6BP35913 854 aa7.05□□□□□ -1.28
PTPN12-209ENST00000460731 ATP8B2P98198 1209 aa7.05□□□□□ -1.28
PTPN12-209ENST00000460731 ERICH6BQ5W0A0 696 aa7.05□□□□□ -1.28
PTPN12-209ENST00000460731 CLEC10AQ8IUN9 316 aa7.05□□□□□ -1.28
PTPN12-209ENST00000460731 FAM20CQ8IXL6 584 aa7.05□□□□□ -1.28
PTPN12-209ENST00000460731 SUCLG2Q96I99 432 aa7.05□□□□□ -1.28
PTPN12-209ENST00000460731 CRAMP1Q96RY5 1269 aa7.05□□□□□ -1.28
PTPN12-209ENST00000460731 FAM83CQ9BQN1 747 aa7.05□□□□□ -1.28
PTPN12-209ENST00000460731 ANKRD31Q8N7Z5 1873 aa7.04□□□□□ -1.28
PTPN12-209ENST00000460731 USP17L15C9J2P7 530 aa7.04□□□□□ -1.28
PTPN12-209ENST00000460731 USP17L10C9JJH3 530 aa7.04□□□□□ -1.28
PTPN12-209ENST00000460731 USP17L13C9JLJ4 530 aa7.04□□□□□ -1.28
PTPN12-209ENST00000460731 USP17L12C9JPN9 530 aa7.04□□□□□ -1.28
PTPN12-209ENST00000460731 USP17L11C9JVI0 530 aa7.04□□□□□ -1.28
PTPN12-209ENST00000460731 USP17L21D6R901 530 aa7.04□□□□□ -1.28
PTPN12-209ENST00000460731 USP17L18D6R9N7 530 aa7.04□□□□□ -1.28
PTPN12-209ENST00000460731 USP17L22D6RA61 530 aa7.04□□□□□ -1.28
PTPN12-209ENST00000460731 USP17L17D6RBQ6 530 aa7.04□□□□□ -1.28
PTPN12-209ENST00000460731 USP17L19D6RCP7 530 aa7.04□□□□□ -1.28
PTPN12-209ENST00000460731 USP17L20D6RJB6 530 aa7.04□□□□□ -1.28
PTPN12-209ENST00000460731 GNAI2P04899 355 aa7.04□□□□□ -1.28
PTPN12-209ENST00000460731 UBTFL1P0CB47 393 aaPredicted RBP7.04□□□□□ -1.28
PTPN12-209ENST00000460731 HCLS1P14317 486 aaPredicted RBP7.04□□□□□ -1.28
PTPN12-209ENST00000460731 RFX5P48382 616 aaPredicted RBP7.04□□□□□ -1.28
PTPN12-209ENST00000460731 CTSWP56202 376 aa7.04□□□□□ -1.28
PTPN12-209ENST00000460731 ST5P78524 1137 aa7.04□□□□□ -1.28
PTPN12-209ENST00000460731 USP17L24Q0WX57 530 aa7.04□□□□□ -1.28
PTPN12-209ENST00000460731 TRIP4Q15650 581 aaPredicted RBP7.04□□□□□ -1.28
PTPN12-209ENST00000460731 COL13A1Q5TAT6 717 aaPredicted RBP7.04□□□□□ -1.28
PTPN12-209ENST00000460731 STYK1Q6J9G0 422 aa7.04□□□□□ -1.28
PTPN12-209ENST00000460731 ADAMTSL4Q6UY14 1074 aa7.04□□□□□ -1.28
PTPN12-209ENST00000460731 ITPRIPQ8IWB1 547 aa7.04□□□□□ -1.28
PTPN12-209ENST00000460731 SIRT2Q8IXJ6 389 aa7.04□□□□□ -1.28
PTPN12-209ENST00000460731 RPAP2Q8IXW5 612 aaPredicted RBP7.04□□□□□ -1.28
PTPN12-209ENST00000460731 SHKBP1Q8TBC3 707 aa7.04□□□□□ -1.28
PTPN12-209ENST00000460731 SSH3Q8TE77 659 aa7.04□□□□□ -1.28
PTPN12-209ENST00000460731 GOLGB1Q14789 3259 aaKnown RBP7.04□□□□□ -1.28
PTPN12-209ENST00000460731 LRP5O75197 1615 aa7.04□□□□□ -1.28
PTPN12-209ENST00000460731 DDX60Q8IY21 1712 aaKnown RBP7.04□□□□□ -1.28
PTPN12-209ENST00000460731 LAMB2P55268 1798 aa7.03□□□□□ -1.28
PTPN12-209ENST00000460731 BBOX1O75936 387 aa7.03□□□□□ -1.28
PTPN12-209ENST00000460731 NPR1P16066 1061 aa7.03□□□□□ -1.28
PTPN12-209ENST00000460731 CCDC152Q4G0S7 254 aa7.03□□□□□ -1.28
PTPN12-209ENST00000460731 CEP85Q6P2H3 762 aa7.03□□□□□ -1.28
PTPN12-209ENST00000460731 LMBR1LQ6UX01 489 aa7.03□□□□□ -1.28
PTPN12-209ENST00000460731 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.03□□□□□ -1.28
PTPN12-209ENST00000460731 OR13H1Q8NG92 308 aa7.03□□□□□ -1.28
PTPN12-209ENST00000460731 FOXD4L4Q8WXT5 416 aaPredicted RBP7.03□□□□□ -1.28
PTPN12-209ENST00000460731 JARID2Q92833 1246 aaPredicted RBP7.03□□□□□ -1.28
PTPN12-209ENST00000460731 MASTLQ96GX5 879 aa7.03□□□□□ -1.28
PTPN12-209ENST00000460731 CRBNQ96SW2 442 aa7.03□□□□□ -1.28
PTPN12-209ENST00000460731 SYT17Q9BSW7 474 aa7.03□□□□□ -1.28
PTPN12-209ENST00000460731 BICC1Q9H694 974 aaKnown RBP7.03□□□□□ -1.28
PTPN12-209ENST00000460731 COPRSQ9NQ92 184 aa7.03□□□□□ -1.28
PTPN12-209ENST00000460731 NOP58Q9Y2X3 529 aaKnown RBP7.03□□□□□ -1.28
PTPN12-209ENST00000460731 LRRFIP2Q9Y608 721 aaKnown RBP7.03□□□□□ -1.28
PTPN12-209ENST00000460731 KIAA1551Q9HCM1 1747 aa7.03□□□□□ -1.28
PTPN12-209ENST00000460731 MYH3P11055 1940 aa7.02□□□□□ -1.29
PTPN12-209ENST00000460731 H0YIN7 160 aa7.02□□□□□ -1.29
PTPN12-209ENST00000460731 FSCN2O14926 492 aa7.02□□□□□ -1.29
PTPN12-209ENST00000460731 ADAM11O75078 769 aa7.02□□□□□ -1.29
PTPN12-209ENST00000460731 DPEP1P16444 411 aa7.02□□□□□ -1.29
PTPN12-209ENST00000460731 ALDH1B1P30837 517 aa7.02□□□□□ -1.29
PTPN12-209ENST00000460731 RPS8P62241 208 aaKnown RBP7.02□□□□□ -1.29
PTPN12-209ENST00000460731 PTPN12Q05209 780 aaKnown RBP7.02□□□□□ -1.29
PTPN12-209ENST00000460731 HDAC1Q13547 482 aaPredicted RBP7.02□□□□□ -1.29
PTPN12-209ENST00000460731 COX20Q5RI15 118 aa7.02□□□□□ -1.29
PTPN12-209ENST00000460731 TXNDC11Q6PKC3 985 aa7.02□□□□□ -1.29
PTPN12-209ENST00000460731 TMC4Q7Z404 712 aa7.02□□□□□ -1.29
PTPN12-209ENST00000460731 ABI1Q8IZP0 508 aa7.02□□□□□ -1.29
PTPN12-209ENST00000460731 KLHL23Q8NBE8 558 aa7.02□□□□□ -1.29
PTPN12-209ENST00000460731 GREM2Q9H772 168 aa7.02□□□□□ -1.29
PTPN12-209ENST00000460731 SNED1Q8TER0 1413 aa7.01□□□□□ -1.29
PTPN12-209ENST00000460731 BRCA1P38398 1863 aaKnown RBP7.01□□□□□ -1.29
PTPN12-209ENST00000460731 TNRC6CQ9HCJ0 1690 aaKnown RBP7.01□□□□□ -1.29
PTPN12-209ENST00000460731 A0A0G2JLW4 131 aa7.01□□□□□ -1.29
PTPN12-209ENST00000460731 PNMA6EA0A0J9YXQ4 647 aa7.01□□□□□ -1.29
PTPN12-209ENST00000460731 FAM177BA6PVY3 158 aa7.01□□□□□ -1.29
PTPN12-209ENST00000460731 CIAO1O76071 339 aa7.01□□□□□ -1.29
PTPN12-209ENST00000460731 CDC27P30260 824 aa7.01□□□□□ -1.29
PTPN12-209ENST00000460731 ATP11AP98196 1134 aa7.01□□□□□ -1.29
PTPN12-209ENST00000460731 GRAPQ13588 217 aa7.01□□□□□ -1.29
PTPN12-209ENST00000460731 CBLL1Q75N03 491 aa7.01□□□□□ -1.29
PTPN12-209ENST00000460731 C2CD5Q86YS7 1000 aa7.01□□□□□ -1.29
PTPN12-209ENST00000460731 ETFBKMTQ8IXQ9 262 aa7.01□□□□□ -1.29
PTPN12-209ENST00000460731 EXOC6Q8TAG9 804 aa7.01□□□□□ -1.29
PTPN12-209ENST00000460731 GRAPLQ8TC17 118 aaPredicted RBP7.01□□□□□ -1.29
PTPN12-209ENST00000460731 GLMNQ92990 594 aa7.01□□□□□ -1.29
PTPN12-209ENST00000460731 RBM17Q96I25 401 aaKnown RBP7.01□□□□□ -1.29
PTPN12-209ENST00000460731 SEC31BQ9NQW1 1179 aa7.01□□□□□ -1.29
PTPN12-209ENST00000460731 BSDC1Q9NW68 430 aaPredicted RBP7.01□□□□□ -1.29
PTPN12-209ENST00000460731 RIPOR2Q9Y4F9 1068 aa7.01□□□□□ -1.29
PTPN12-209ENST00000460731 DLEC1Q9Y238 1755 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms