RNA–Protein interactions for RNA: ENST00000460345.1

TNC-204, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-204ENST00000460345 ALG1Q9BT22 464 aa11.37□□□□□ -0.59
TNC-204ENST00000460345 TANGO6Q9C0B7 1094 aa11.37□□□□□ -0.59
TNC-204ENST00000460345 RPAP3Q9H6T3 665 aaPredicted RBP11.37□□□□□ -0.59
TNC-204ENST00000460345 RIOX1Q9H6W3 641 aa11.37□□□□□ -0.59
TNC-204ENST00000460345 RBM27Q9P2N5 1060 aaKnown RBP11.37□□□□□ -0.59
TNC-204ENST00000460345 SEC63Q9UGP8 760 aaKnown RBP11.37□□□□□ -0.59
TNC-204ENST00000460345 FEM1BQ9UK73 627 aa11.37□□□□□ -0.59
TNC-204ENST00000460345 TRPM7Q96QT4 1865 aa11.37□□□□□ -0.59
TNC-204ENST00000460345 TMEM88BA6NKF7 163 aa11.36□□□□□ -0.59
TNC-204ENST00000460345 H3BQV1 296 aa11.36□□□□□ -0.59
TNC-204ENST00000460345 PDCP20941 246 aa11.36□□□□□ -0.59
TNC-204ENST00000460345 GJA5P36382 358 aa11.36□□□□□ -0.59
TNC-204ENST00000460345 SNAPC2Q13487 334 aa11.36□□□□□ -0.59
TNC-204ENST00000460345 SLC35G1Q2M3R5 365 aa11.36□□□□□ -0.59
TNC-204ENST00000460345 IFFO2Q5TF58 517 aa11.36□□□□□ -0.59
TNC-204ENST00000460345 BTNL9Q6UXG8 535 aa11.36□□□□□ -0.59
TNC-204ENST00000460345 FAM160B2Q86V87 743 aa11.36□□□□□ -0.59
TNC-204ENST00000460345 KIFC2Q96AC6 838 aa11.36□□□□□ -0.59
TNC-204ENST00000460345 C8orf76Q96K31 380 aa11.36□□□□□ -0.59
TNC-204ENST00000460345 AIFM3Q96NN9 605 aa11.36□□□□□ -0.59
TNC-204ENST00000460345 PIGSQ96S52 555 aa11.36□□□□□ -0.59
TNC-204ENST00000460345 JMJD4Q9H9V9 463 aa11.36□□□□□ -0.59
TNC-204ENST00000460345 ABT1Q9ULW3 272 aaKnown RBP11.36□□□□□ -0.59
TNC-204ENST00000460345 KCNH4Q9UQ05 1017 aa11.36□□□□□ -0.59
TNC-204ENST00000460345 PHIPQ8WWQ0 1821 aa11.36□□□□□ -0.59
TNC-204ENST00000460345 BAZ2BQ9UIF8 2168 aaKnown RBP11.35□□□□□ -0.59
TNC-204ENST00000460345 A0A0G2JLL6 359 aaPredicted RBP11.35□□□□□ -0.59
TNC-204ENST00000460345 VPS37CA5D8V6 355 aaPredicted RBP11.35□□□□□ -0.59
TNC-204ENST00000460345 PLA2G6O60733 806 aa11.35□□□□□ -0.59
TNC-204ENST00000460345 FLOT1O75955 427 aa11.35□□□□□ -0.59
TNC-204ENST00000460345 SCG2P13521 617 aa11.35□□□□□ -0.59
TNC-204ENST00000460345 SYT1P21579 422 aa11.35□□□□□ -0.59
TNC-204ENST00000460345 ZNF157P51786 506 aaPredicted RBP11.35□□□□□ -0.59
TNC-204ENST00000460345 TRIM29Q14134 588 aa11.35□□□□□ -0.59
TNC-204ENST00000460345 PKN1Q16512 942 aa11.35□□□□□ -0.59
TNC-204ENST00000460345 PFKFB3Q16875 520 aaPredicted RBP11.35□□□□□ -0.59
TNC-204ENST00000460345 FASTKD5Q7L8L6 764 aaKnown RBP11.35□□□□□ -0.59
TNC-204ENST00000460345 PRRT2Q7Z6L0 340 aaPredicted RBP11.35□□□□□ -0.59
TNC-204ENST00000460345 SAPCD2Q86UD0 394 aa11.35□□□□□ -0.59
TNC-204ENST00000460345 PROCA1Q8NCQ7 364 aaPredicted RBP11.35□□□□□ -0.59
TNC-204ENST00000460345 SLF1Q9BQI6 1058 aa11.35□□□□□ -0.59
TNC-204ENST00000460345 FBXO28Q9NVF7 368 aa11.35□□□□□ -0.59
TNC-204ENST00000460345 CHMP5Q9NZZ3 219 aa11.35□□□□□ -0.59
TNC-204ENST00000460345 PRR12Q9ULL5 1215 aa11.35□□□□□ -0.59
TNC-204ENST00000460345 CIZ1Q9ULV3 898 aaPredicted RBP11.35□□□□□ -0.59
TNC-204ENST00000460345 PNMA6FA0A0J9YX94 578 aa11.34□□□□□ -0.59
TNC-204ENST00000460345 USP17L15C9J2P7 530 aa11.34□□□□□ -0.59
TNC-204ENST00000460345 USP17L13C9JLJ4 530 aa11.34□□□□□ -0.59
TNC-204ENST00000460345 USP17L11C9JVI0 530 aa11.34□□□□□ -0.59
TNC-204ENST00000460345 USP17L18D6R9N7 530 aa11.34□□□□□ -0.59
TNC-204ENST00000460345 USP17L22D6RA61 530 aa11.34□□□□□ -0.59
TNC-204ENST00000460345 USP17L17D6RBQ6 530 aa11.34□□□□□ -0.59
TNC-204ENST00000460345 USP17L19D6RCP7 530 aa11.34□□□□□ -0.59
TNC-204ENST00000460345 USP17L20D6RJB6 530 aa11.34□□□□□ -0.59
TNC-204ENST00000460345 STX6O43752 255 aa11.34□□□□□ -0.59
TNC-204ENST00000460345 XBP1P17861 261 aa11.34□□□□□ -0.59
TNC-204ENST00000460345 DDIT3P35638 169 aa11.34□□□□□ -0.59
TNC-204ENST00000460345 GTF2A2P52657 109 aa11.34□□□□□ -0.59
TNC-204ENST00000460345 SNAP25P60880 206 aa11.34□□□□□ -0.59
TNC-204ENST00000460345 NUCB2P80303 420 aa11.34□□□□□ -0.59
TNC-204ENST00000460345 GUCY1B3Q02153 619 aa11.34□□□□□ -0.59
TNC-204ENST00000460345 USP17L24Q0WX57 530 aa11.34□□□□□ -0.59
TNC-204ENST00000460345 CDC37Q16543 378 aaPredicted RBP11.34□□□□□ -0.59
TNC-204ENST00000460345 TREML2Q5T2D2 321 aa11.34□□□□□ -0.59
TNC-204ENST00000460345 FOXD4L5Q5VV16 416 aaPredicted RBP11.34□□□□□ -0.59
TNC-204ENST00000460345 SPRYD7Q5W111 196 aa11.34□□□□□ -0.59
TNC-204ENST00000460345 RGMBQ6NW40 437 aa11.34□□□□□ -0.59
TNC-204ENST00000460345 CATSPERGQ6ZRH7 1159 aa11.34□□□□□ -0.59
TNC-204ENST00000460345 HEATR3Q7Z4Q2 680 aa11.34□□□□□ -0.59
TNC-204ENST00000460345 PRPF38AQ8NAV1 312 aaKnown RBP11.34□□□□□ -0.59
TNC-204ENST00000460345 FOXD4L4Q8WXT5 416 aaPredicted RBP11.34□□□□□ -0.59
TNC-204ENST00000460345 CTDP1Q9Y5B0 961 aaPredicted RBP11.34□□□□□ -0.59
TNC-204ENST00000460345 TLL2Q9Y6L7 1015 aa11.34□□□□□ -0.59
TNC-204ENST00000460345 CCL15-CCL14A0A0B4J2E2 113 aa11.33□□□□□ -0.6
TNC-204ENST00000460345 ZBTB5O15062 677 aa11.33□□□□□ -0.6
TNC-204ENST00000460345 ZBTB48P10074 688 aaPredicted RBP11.33□□□□□ -0.6
TNC-204ENST00000460345 CETPP11597 493 aa11.33□□□□□ -0.6
TNC-204ENST00000460345 PDIA4P13667 645 aaKnown RBP11.33□□□□□ -0.6
TNC-204ENST00000460345 PABPC4Q13310 644 aaKnown RBP eCLIP11.33□□□□□ -0.6
TNC-204ENST00000460345 COG2Q14746 738 aa11.33□□□□□ -0.6
TNC-204ENST00000460345 CCL15Q16663 113 aa11.33□□□□□ -0.6
TNC-204ENST00000460345 QRICH1Q2TAL8 776 aa11.33□□□□□ -0.6
TNC-204ENST00000460345 OTUD7BQ6GQQ9 843 aa11.33□□□□□ -0.6
TNC-204ENST00000460345 CCDC174Q6PII3 467 aa11.33□□□□□ -0.6
TNC-204ENST00000460345 PAXIP1Q6ZW49 1069 aaPredicted RBP11.33□□□□□ -0.6
TNC-204ENST00000460345 RASAL3Q86YV0 1011 aa11.33□□□□□ -0.6
TNC-204ENST00000460345 GPKOWQ92917 476 aaPredicted RBP eCLIP11.33□□□□□ -0.6
TNC-204ENST00000460345 MTMR8Q96EF0 704 aa11.33□□□□□ -0.6
TNC-204ENST00000460345 GJB4Q9NTQ9 266 aa11.33□□□□□ -0.6
TNC-204ENST00000460345 VPS54Q9P1Q0 977 aa11.33□□□□□ -0.6
TNC-204ENST00000460345 PPP1R9AQ9ULJ8 1098 aa11.33□□□□□ -0.6
TNC-204ENST00000460345 WDR33Q9C0J8 1336 aaKnown RBP11.33□□□□□ -0.6
TNC-204ENST00000460345 ZBED4O75132 1171 aa11.32□□□□□ -0.6
TNC-204ENST00000460345 OSBPP22059 807 aa11.32□□□□□ -0.6
TNC-204ENST00000460345 DSG3P32926 999 aa11.32□□□□□ -0.6
TNC-204ENST00000460345 NLRP5P59047 1200 aa11.32□□□□□ -0.6
TNC-204ENST00000460345 IRX3P78415 501 aaPredicted RBP11.32□□□□□ -0.6
TNC-204ENST00000460345 PKP1Q13835 747 aa11.32□□□□□ -0.6
TNC-204ENST00000460345 SAFBQ15424 915 aaKnown RBP eCLIP11.32□□□□□ -0.6
TNC-204ENST00000460345 KRT40Q6A162 431 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms