RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 USP17L11C9JVI0 530 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 USP17L18D6R9N7 530 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 USP17L22D6RA61 530 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 USP17L17D6RBQ6 530 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 USP17L19D6RCP7 530 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 USP17L20D6RJB6 530 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 PDHBP11177 359 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 IDEP14735 1019 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 ERCC3P19447 782 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 USP17L24Q0WX57 530 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 CCDC174Q6PII3 467 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 USP17L6PQ6QN14 398 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 HHIPL2Q6UWX4 724 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 CDAN1Q8IWY9 1227 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 TBCKQ8TEA7 893 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 FUCA2Q9BTY2 467 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 TRMT1Q9NXH9 659 aaKnown RBP10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 CTDP1Q9Y5B0 961 aaPredicted RBP10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 ZNF76P36508 570 aa10.62□□□□□ -0.71
NUDCD3-203ENST00000460110 NONOQ15233 471 aaKnown RBP eCLIP10.62□□□□□ -0.71
NUDCD3-203ENST00000460110 RTKN2Q8IZC4 609 aa10.62□□□□□ -0.71
NUDCD3-203ENST00000460110 CPLX3Q8WVH0 158 aa10.62□□□□□ -0.71
NUDCD3-203ENST00000460110 KIFC2Q96AC6 838 aa10.62□□□□□ -0.71
NUDCD3-203ENST00000460110 TCP11L1Q9NUJ3 509 aa10.62□□□□□ -0.71
NUDCD3-203ENST00000460110 FBXO2Q9UK22 296 aaPredicted RBP10.62□□□□□ -0.71
NUDCD3-203ENST00000460110 PCDHA1Q9Y5I3 950 aa10.62□□□□□ -0.71
NUDCD3-203ENST00000460110 GAKO14976 1311 aa10.62□□□□□ -0.71
NUDCD3-203ENST00000460110 ATP1A3P13637 1013 aa10.62□□□□□ -0.71
NUDCD3-203ENST00000460110 SHMT1P34896 483 aa10.62□□□□□ -0.71
NUDCD3-203ENST00000460110 ARID5BQ14865 1188 aa10.62□□□□□ -0.71
NUDCD3-203ENST00000460110 CPXCR1Q8N123 301 aa10.62□□□□□ -0.71
NUDCD3-203ENST00000460110 FAM163AQ96GL9 167 aaPredicted RBP10.62□□□□□ -0.71
NUDCD3-203ENST00000460110 TAOK3Q9H2K8 898 aa10.62□□□□□ -0.71
NUDCD3-203ENST00000460110 ZKSCAN5Q9Y2L8 839 aa10.62□□□□□ -0.71
NUDCD3-203ENST00000460110 UBXN2AP68543 259 aa10.62□□□□□ -0.71
NUDCD3-203ENST00000460110 RAD51AP2Q09MP3 1159 aa10.62□□□□□ -0.71
NUDCD3-203ENST00000460110 NBPF9Q3BBW0 867 aa10.62□□□□□ -0.71
NUDCD3-203ENST00000460110 RESP18Q5W5W9 173 aa10.62□□□□□ -0.71
NUDCD3-203ENST00000460110 ARHGAP27Q6ZUM4 889 aa10.62□□□□□ -0.71
NUDCD3-203ENST00000460110 SAMD7Q7Z3H4 446 aa10.62□□□□□ -0.71
NUDCD3-203ENST00000460110 FAM198AQ9UFP1 575 aa10.62□□□□□ -0.71
NUDCD3-203ENST00000460110 FGRP09769 529 aa10.61□□□□□ -0.71
NUDCD3-203ENST00000460110 ADCY7P51828 1080 aa10.61□□□□□ -0.71
NUDCD3-203ENST00000460110 RRAGBQ5VZM2 374 aa10.61□□□□□ -0.71
NUDCD3-203ENST00000460110 ADGRF4Q8IZF3 695 aa10.61□□□□□ -0.71
NUDCD3-203ENST00000460110 TMEM60Q9H2L4 133 aa10.61□□□□□ -0.71
NUDCD3-203ENST00000460110 HOMER2Q9NSB8 354 aa10.61□□□□□ -0.71
NUDCD3-203ENST00000460110 FZD1Q9UP38 647 aa10.61□□□□□ -0.71
NUDCD3-203ENST00000460110 SRPRBQ9Y5M8 271 aaKnown RBP10.61□□□□□ -0.71
NUDCD3-203ENST00000460110 CICQ96RK0 1608 aaPredicted RBP10.61□□□□□ -0.71
NUDCD3-203ENST00000460110 F5H6K3 240 aa10.61□□□□□ -0.71
NUDCD3-203ENST00000460110 ZNF75DP51815 510 aa10.61□□□□□ -0.71
NUDCD3-203ENST00000460110 NLRP12P59046 1061 aa10.61□□□□□ -0.71
NUDCD3-203ENST00000460110 KLRC3Q07444 240 aa10.61□□□□□ -0.71
NUDCD3-203ENST00000460110 METTL16Q86W50 562 aaKnown RBP10.61□□□□□ -0.71
NUDCD3-203ENST00000460110 ZDHHC15Q96MV8 337 aa10.61□□□□□ -0.71
NUDCD3-203ENST00000460110 PKD2L1Q9P0L9 805 aa10.61□□□□□ -0.71
NUDCD3-203ENST00000460110 WNK3Q9BYP7 1800 aa10.61□□□□□ -0.71
NUDCD3-203ENST00000460110 TNRC6CQ9HCJ0 1690 aaKnown RBP10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 THSD7AQ9UPZ6 1657 aa10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 HOXA13P31271 388 aaPredicted RBP10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 ECE1P42892 770 aa10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 CXCL9Q07325 125 aa10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 IQUBQ8NA54 791 aa10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 PSTPIP2Q9H939 334 aa10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 KANSL2Q9H9L4 492 aa10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 FANCLQ9NW38 375 aa10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 BARHL2Q9NY43 387 aa10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 SWAP70Q9UH65 585 aa10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 PALM3A6NDB9 673 aaPredicted RBP10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 SMTNL1A8MU46 457 aa10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 CFBP00751 764 aa10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 RCAN1P53805 252 aa10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 UBASH3AP57075 661 aa10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 SLC35G1Q2M3R5 365 aa10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 CIAPIN1Q6FI81 312 aa10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 DHX36Q9H2U1 1008 aaKnown RBP10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 SUGT1Q9Y2Z0 365 aa10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 NHSQ6T4R5 1651 aa10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 RASSF7Q02833 373 aa10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 GOLGA8FQ08AF8 430 aa10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 GOLGA8DPQ0D2H9 430 aa10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 RSBN1LQ6PCB5 846 aaPredicted RBP10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 FAM177A1Q8N128 213 aaPredicted RBP10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 XPO4Q9C0E2 1151 aaKnown RBP10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 PCDHA6Q9UN73 950 aa10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 PCDHA8Q9Y5H6 950 aa10.6□□□□□ -0.71
NUDCD3-203ENST00000460110 STXBP3O00186 592 aa10.59□□□□□ -0.71
NUDCD3-203ENST00000460110 NEMFO60524 1076 aa10.59□□□□□ -0.71
NUDCD3-203ENST00000460110 FOXP4Q8IVH2 680 aaPredicted RBP10.59□□□□□ -0.71
NUDCD3-203ENST00000460110 ACER1Q8TDN7 264 aa10.59□□□□□ -0.71
NUDCD3-203ENST00000460110 CCDC17Q96LX7 622 aa10.59□□□□□ -0.71
NUDCD3-203ENST00000460110 LZTS2Q9BRK4 669 aa10.59□□□□□ -0.71
NUDCD3-203ENST00000460110 NFE2L3Q9Y4A8 694 aa10.59□□□□□ -0.71
NUDCD3-203ENST00000460110 BMP15O95972 392 aa10.59□□□□□ -0.71
NUDCD3-203ENST00000460110 MRPL12P52815 198 aaKnown RBP10.59□□□□□ -0.71
NUDCD3-203ENST00000460110 DYMQ7RTS9 669 aa10.59□□□□□ -0.71
NUDCD3-203ENST00000460110 NEK8Q86SG6 692 aa10.59□□□□□ -0.71
NUDCD3-203ENST00000460110 PDLIM2Q96JY6 352 aa10.59□□□□□ -0.71
NUDCD3-203ENST00000460110 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms