RNA–Protein interactions for RNA: ENST00000459852.1

RAPGEF4-205, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 5

Gene RAPGEF4, Length 560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-205ENST00000459852 CEP95Q96GE4 821 aa16.48■□□□□ 0.23
RAPGEF4-205ENST00000459852 MTMR4Q9NYA4 1195 aa16.48■□□□□ 0.23
RAPGEF4-205ENST00000459852 CLIP2Q9UDT6 1046 aa16.48■□□□□ 0.23
RAPGEF4-205ENST00000459852 STXBP5LQ9Y2K9 1186 aa16.48■□□□□ 0.23
RAPGEF4-205ENST00000459852 COL6A3P12111 3177 aa16.48■□□□□ 0.23
RAPGEF4-205ENST00000459852 SYNGAP1Q96PV0 1343 aa16.47■□□□□ 0.23
RAPGEF4-205ENST00000459852 DNAJC25-GNG10A0A024R161 153 aa16.47■□□□□ 0.23
RAPGEF4-205ENST00000459852 PRDM1O75626 825 aa16.47■□□□□ 0.23
RAPGEF4-205ENST00000459852 APPP05067 770 aa16.47■□□□□ 0.23
RAPGEF4-205ENST00000459852 TAL1P17542 331 aaPredicted RBP16.47■□□□□ 0.23
RAPGEF4-205ENST00000459852 FAM109BQ6ICB4 259 aaPredicted RBP16.47■□□□□ 0.23
RAPGEF4-205ENST00000459852 RNF180Q86T96 592 aa16.47■□□□□ 0.23
RAPGEF4-205ENST00000459852 FERMT2Q96AC1 680 aa16.47■□□□□ 0.23
RAPGEF4-205ENST00000459852 NACAP1Q9BZK3 213 aa16.47■□□□□ 0.23
RAPGEF4-205ENST00000459852 PDLIM7Q9NR12 457 aa16.47■□□□□ 0.23
RAPGEF4-205ENST00000459852 CNPY2Q9Y2B0 182 aa16.47■□□□□ 0.23
RAPGEF4-205ENST00000459852 RIPK3Q9Y572 518 aa16.47■□□□□ 0.23
RAPGEF4-205ENST00000459852 PCDHB15Q9Y5E8 787 aa16.47■□□□□ 0.23
RAPGEF4-205ENST00000459852 POTEB2H3BUK9 544 aa16.46■□□□□ 0.23
RAPGEF4-205ENST00000459852 TTLL1O95922 423 aa16.46■□□□□ 0.23
RAPGEF4-205ENST00000459852 OAZ1P54368 228 aa16.46■□□□□ 0.23
RAPGEF4-205ENST00000459852 MAMDC4Q6UXC1 1216 aa16.46■□□□□ 0.23
RAPGEF4-205ENST00000459852 NEDD1Q8NHV4 660 aa16.46■□□□□ 0.23
RAPGEF4-205ENST00000459852 SLC38A10Q9HBR0 1119 aa16.46■□□□□ 0.23
RAPGEF4-205ENST00000459852 PRDM5Q9NQX1 630 aaPredicted RBP16.46■□□□□ 0.23
RAPGEF4-205ENST00000459852 FEM1BQ9UK73 627 aa16.46■□□□□ 0.23
RAPGEF4-205ENST00000459852 ZBED4O75132 1171 aa16.45■□□□□ 0.22
RAPGEF4-205ENST00000459852 ADAMTS4O75173 837 aa16.45■□□□□ 0.22
RAPGEF4-205ENST00000459852 PGK1P00558 417 aa16.45■□□□□ 0.22
RAPGEF4-205ENST00000459852 PDE4BQ07343 736 aa16.45■□□□□ 0.22
RAPGEF4-205ENST00000459852 ZMYM1Q5SVZ6 1142 aa16.45■□□□□ 0.22
RAPGEF4-205ENST00000459852 ZNF467Q7Z7K2 595 aaPredicted RBP16.45■□□□□ 0.22
RAPGEF4-205ENST00000459852 OTUD7AQ8TE49 926 aaPredicted RBP16.45■□□□□ 0.22
RAPGEF4-205ENST00000459852 DDX11Q96FC9 970 aa16.45■□□□□ 0.22
RAPGEF4-205ENST00000459852 SEC62Q99442 399 aaKnown RBP16.45■□□□□ 0.22
RAPGEF4-205ENST00000459852 TSEN34Q9BSV6 310 aaKnown RBP16.45■□□□□ 0.22
RAPGEF4-205ENST00000459852 FSD1Q9BTV5 496 aa16.45■□□□□ 0.22
RAPGEF4-205ENST00000459852 CUL9Q8IWT3 2517 aa16.45■□□□□ 0.22
RAPGEF4-205ENST00000459852 A0A1W2PQ45 241 aaPredicted RBP16.44■□□□□ 0.22
RAPGEF4-205ENST00000459852 A0A1W2PQY0 241 aa16.44■□□□□ 0.22
RAPGEF4-205ENST00000459852 TRIM43BA6NCK2 446 aa16.44■□□□□ 0.22
RAPGEF4-205ENST00000459852 SNAI1O95863 264 aaPredicted RBP16.44■□□□□ 0.22
RAPGEF4-205ENST00000459852 SLC3A2P08195 630 aaKnown RBP16.44■□□□□ 0.22
RAPGEF4-205ENST00000459852 TSPY3P0CV98 308 aa16.44■□□□□ 0.22
RAPGEF4-205ENST00000459852 TSPY8P0CW00 308 aa16.44■□□□□ 0.22
RAPGEF4-205ENST00000459852 MX1P20591 662 aa16.44■□□□□ 0.22
RAPGEF4-205ENST00000459852 TLE2Q04725 743 aa16.44■□□□□ 0.22
RAPGEF4-205ENST00000459852 PPARAQ07869 468 aa16.44■□□□□ 0.22
RAPGEF4-205ENST00000459852 SH3RF1Q7Z6J0 888 aa16.44■□□□□ 0.22
RAPGEF4-205ENST00000459852 CPXCR1Q8N123 301 aa16.44■□□□□ 0.22
RAPGEF4-205ENST00000459852 LRRC47Q8N1G4 583 aaKnown RBP16.44■□□□□ 0.22
RAPGEF4-205ENST00000459852 CHST13Q8NET6 341 aa16.44■□□□□ 0.22
RAPGEF4-205ENST00000459852 BADQ92934 168 aa16.44■□□□□ 0.22
RAPGEF4-205ENST00000459852 KIFC2Q96AC6 838 aa16.44■□□□□ 0.22
RAPGEF4-205ENST00000459852 TRIM43Q96BQ3 446 aaPredicted RBP16.44■□□□□ 0.22
RAPGEF4-205ENST00000459852 LENG1Q96BZ8 264 aaPredicted RBP16.44■□□□□ 0.22
RAPGEF4-205ENST00000459852 NAPBQ9H115 298 aa16.44■□□□□ 0.22
RAPGEF4-205ENST00000459852 FBXO40Q9UH90 709 aa16.44■□□□□ 0.22
RAPGEF4-205ENST00000459852 CTDP1Q9Y5B0 961 aaPredicted RBP16.44■□□□□ 0.22
RAPGEF4-205ENST00000459852 FDX1P10109 184 aa16.43■□□□□ 0.22
RAPGEF4-205ENST00000459852 BMP3P12645 472 aa16.43■□□□□ 0.22
RAPGEF4-205ENST00000459852 SHHQ15465 462 aa16.43■□□□□ 0.22
RAPGEF4-205ENST00000459852 SLFN13Q68D06 897 aa16.43■□□□□ 0.22
RAPGEF4-205ENST00000459852 RAVER2Q9HCJ3 691 aaKnown RBP16.43■□□□□ 0.22
RAPGEF4-205ENST00000459852 FAM184BQ9ULE4 1060 aa16.43■□□□□ 0.22
RAPGEF4-205ENST00000459852 TACC3Q9Y6A5 838 aa16.43■□□□□ 0.22
RAPGEF4-205ENST00000459852 SALL3Q9BXA9 1300 aa16.43■□□□□ 0.22
RAPGEF4-205ENST00000459852 SYNRGQ9UMZ2 1314 aa16.43■□□□□ 0.22
RAPGEF4-205ENST00000459852 CLTBP09497 229 aa16.42■□□□□ 0.22
RAPGEF4-205ENST00000459852 TFAP4Q01664 338 aa16.42■□□□□ 0.22
RAPGEF4-205ENST00000459852 PPP4R3BQ5MIZ7 849 aa16.42■□□□□ 0.22
RAPGEF4-205ENST00000459852 C9orf50Q5SZB4 431 aa16.42■□□□□ 0.22
RAPGEF4-205ENST00000459852 KLHDC9Q8NEP7 349 aa16.42■□□□□ 0.22
RAPGEF4-205ENST00000459852 GMCL1Q96IK5 515 aa16.42■□□□□ 0.22
RAPGEF4-205ENST00000459852 FGD4Q96M96 766 aa16.42■□□□□ 0.22
RAPGEF4-205ENST00000459852 ZHX1Q9UKY1 873 aaPredicted RBP16.42■□□□□ 0.22
RAPGEF4-205ENST00000459852 MCM3APO60318 1980 aa16.42■□□□□ 0.22
RAPGEF4-205ENST00000459852 MOXD2PA6NHM9 499 aa16.41■□□□□ 0.22
RAPGEF4-205ENST00000459852 KIAA0355O15063 1070 aa16.41■□□□□ 0.22
RAPGEF4-205ENST00000459852 FOXP2O15409 715 aa16.41■□□□□ 0.22
RAPGEF4-205ENST00000459852 DUSP11O75319 330 aaKnown RBP16.41■□□□□ 0.22
RAPGEF4-205ENST00000459852 CST5P28325 142 aaPredicted RBP16.41■□□□□ 0.22
RAPGEF4-205ENST00000459852 SLC4A3P48751 1232 aa16.41■□□□□ 0.22
RAPGEF4-205ENST00000459852 ACLYP53396 1101 aa16.41■□□□□ 0.22
RAPGEF4-205ENST00000459852 CCSAPQ6IQ19 270 aaPredicted RBP16.41■□□□□ 0.22
RAPGEF4-205ENST00000459852 ANKRD33Q7Z3H0 272 aa16.41■□□□□ 0.22
RAPGEF4-205ENST00000459852 ANKRD35Q8N283 1001 aa16.41■□□□□ 0.22
RAPGEF4-205ENST00000459852 TOX2Q96NM4 488 aa16.41■□□□□ 0.22
RAPGEF4-205ENST00000459852 GUCD1Q96NT3 240 aa16.41■□□□□ 0.22
RAPGEF4-205ENST00000459852 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.41■□□□□ 0.22
RAPGEF4-205ENST00000459852 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.41■□□□□ 0.22
RAPGEF4-205ENST00000459852 TMEM232C9JQI7 657 aa16.4■□□□□ 0.22
RAPGEF4-205ENST00000459852 DLL1O00548 723 aa16.4■□□□□ 0.22
RAPGEF4-205ENST00000459852 PQBP1O60828 265 aaKnown RBP16.4■□□□□ 0.22
RAPGEF4-205ENST00000459852 ITGB8P26012 769 aa16.4■□□□□ 0.22
RAPGEF4-205ENST00000459852 STAT2P52630 851 aa16.4■□□□□ 0.22
RAPGEF4-205ENST00000459852 ACVR2BQ13705 512 aa16.4■□□□□ 0.22
RAPGEF4-205ENST00000459852 ZNF697Q5TEC3 545 aa16.4■□□□□ 0.22
RAPGEF4-205ENST00000459852 FAM160B2Q86V87 743 aa16.4■□□□□ 0.22
RAPGEF4-205ENST00000459852 NUP133Q8WUM0 1156 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms